BLASTX nr result

ID: Atractylodes22_contig00001188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001188
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268095.1| PREDICTED: rRNA-processing protein fcf2-like...    93   1e-16
emb|CBI26010.3| unnamed protein product [Vitis vinifera]               93   1e-16
ref|XP_002519321.1| conserved hypothetical protein [Ricinus comm...    91   5e-16
ref|XP_003616567.1| Deoxynucleotidyltransferase terminal-interac...    87   7e-15
ref|NP_851091.1| Fcf2 pre-rRNA processing protein [Arabidopsis t...    86   2e-14

>ref|XP_002268095.1| PREDICTED: rRNA-processing protein fcf2-like isoform 1 [Vitis
           vinifera] gi|359477274|ref|XP_003631957.1| PREDICTED:
           rRNA-processing protein fcf2-like isoform 2 [Vitis
           vinifera]
          Length = 198

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 54/96 (56%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
 Frame = -2

Query: 284 MLEDKKVIGLSWEPKLASLSFDTKSGSNGKSPNVSESS--LVYKPMSELVDGLFXXXXXX 111
           M E K VIGLSWEPKL+ LS   K+GS+ KS NV+E+S   ++KP SELVDGLF      
Sbjct: 1   MSESKAVIGLSWEPKLSLLSSAPKNGSD-KSENVAENSGASLWKPDSELVDGLFVPPNNP 59

Query: 110 XXXXXXXXXXXXDTTGKNWFDMPAPTLTPELKKDLK 3
                       DTTG  WFDMPAPT+TPELKKDL+
Sbjct: 60  RKVNKLLRKQVKDTTGTKWFDMPAPTITPELKKDLQ 95


>emb|CBI26010.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 54/96 (56%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
 Frame = -2

Query: 284 MLEDKKVIGLSWEPKLASLSFDTKSGSNGKSPNVSESS--LVYKPMSELVDGLFXXXXXX 111
           M E K VIGLSWEPKL+ LS   K+GS+ KS NV+E+S   ++KP SELVDGLF      
Sbjct: 1   MSESKAVIGLSWEPKLSLLSSAPKNGSD-KSENVAENSGASLWKPDSELVDGLFVPPNNP 59

Query: 110 XXXXXXXXXXXXDTTGKNWFDMPAPTLTPELKKDLK 3
                       DTTG  WFDMPAPT+TPELKKDL+
Sbjct: 60  RKVNKLLRKQVKDTTGTKWFDMPAPTITPELKKDLQ 95


>ref|XP_002519321.1| conserved hypothetical protein [Ricinus communis]
           gi|223541636|gb|EEF43185.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 51/95 (53%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
 Frame = -2

Query: 284 MLEDKKVIGLSWEPKLASLSFDTKSGSNG-KSPNVSESSLVYKPMSELVDGLFXXXXXXX 108
           M E K VIGLSWEPKL SLS  T   +N  KS +  ESS ++K  +EL+DGLF       
Sbjct: 3   MEEKKPVIGLSWEPKLPSLSSSTDFSNNKTKSKHQPESSALWKSNAELIDGLFVPPNNPA 62

Query: 107 XXXXXXXXXXXDTTGKNWFDMPAPTLTPELKKDLK 3
                      DT GKNWFDMPAPT+TPELKKDL+
Sbjct: 63  KFNKLLKSQAKDTLGKNWFDMPAPTMTPELKKDLQ 97


>ref|XP_003616567.1| Deoxynucleotidyltransferase terminal-interacting protein [Medicago
           truncatula] gi|355517902|gb|AES99525.1|
           Deoxynucleotidyltransferase terminal-interacting protein
           [Medicago truncatula]
          Length = 244

 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 49/101 (48%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299 KKGNIMLEDKKVIGLSWEPKLA--SLSFDTKSGSNGKSPNVSESSLVYKPMSELVDGLFX 126
           K   +ML+ K V+GLSW+P+L   SLS  T   S+  S   + SS ++KP SELV+GLF 
Sbjct: 40  KPPKVMLKKKPVVGLSWQPQLPIPSLSKATGDPSHTTSQTKTPSSTIWKPNSELVNGLFV 99

Query: 125 XXXXXXXXXXXXXXXXXDTTGKNWFDMPAPTLTPELKKDLK 3
                            DT GK WFDMPAPT+TPELKKDLK
Sbjct: 100 PPNDPRKLNKLLKQQVKDTAGKQWFDMPAPTITPELKKDLK 140


>ref|NP_851091.1| Fcf2 pre-rRNA processing protein [Arabidopsis thaliana]
           gi|30692248|ref|NP_680266.2| Fcf2 pre-rRNA processing
           protein [Arabidopsis thaliana]
           gi|332006488|gb|AED93871.1| Fcf2 pre-rRNA processing
           protein [Arabidopsis thaliana]
           gi|332006489|gb|AED93872.1| Fcf2 pre-rRNA processing
           protein [Arabidopsis thaliana]
          Length = 196

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 48/95 (50%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
 Frame = -2

Query: 284 MLEDKKVIGLSWEPKLASLSFDTKSGS-NGKSPNVSESSLVYKPMSELVDGLFXXXXXXX 108
           M E K +IGL+WEPKL  LS DTK+ S + K     ESS ++   SELVDGL        
Sbjct: 1   MAETKPLIGLTWEPKLPGLSLDTKTCSTSSKRVESHESSSLWMSKSELVDGLCLPPNDPK 60

Query: 107 XXXXXXXXXXXDTTGKNWFDMPAPTLTPELKKDLK 3
                      DTTG NWFDMPAPT+TPELK+DL+
Sbjct: 61  KINKMIRKQIKDTTGSNWFDMPAPTMTPELKRDLQ 95


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