BLASTX nr result

ID: Atractylodes22_contig00001162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001162
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza s...    64   2e-08
gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group]      63   2e-08
emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group]           63   2e-08
emb|CAE04852.2| OSJNBa0084K01.24 [Oryza sativa Japonica Group]         63   2e-08
gb|ABB47078.1| retrotransposon protein, putative, unclassified [...    62   4e-08

>gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
            Group] gi|108706958|gb|ABF94753.1| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2011

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/103 (34%), Positives = 56/103 (54%)
 Frame = -3

Query: 314  QPQLETQDEQIPSESPTEAEPPITEVHPASVTASDTLPISTEDVPSASAPSSKWTRDHPI 135
            +P   TQDE   S +P++A+  + E                +D+P      +  ++DHPI
Sbjct: 1015 KPSTSTQDEPSTSATPSQAQVEVEEE-------------KAQDLPMPPRIHTALSKDHPI 1061

Query: 134  DQIIGDQEVGVQTRNRKSSCNFCFYTNFLSVTEPKKIEEALQD 6
            DQ++GD   GVQTR+R +S   C + +F+S  EPK ++EAL D
Sbjct: 1062 DQVLGDISKGVQTRSRVAS--ICEHYSFVSCLEPKHVDEALCD 1102


>gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1411

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/103 (35%), Positives = 55/103 (53%)
 Frame = -3

Query: 314  QPQLETQDEQIPSESPTEAEPPITEVHPASVTASDTLPISTEDVPSASAPSSKWTRDHPI 135
            +P   TQDE   S SP++A+  + E                +D P      +  ++DHPI
Sbjct: 824  KPSTSTQDEPSTSASPSQAQVEVEEE-------------KAQDPPMPPRIHTALSKDHPI 870

Query: 134  DQIIGDQEVGVQTRNRKSSCNFCFYTNFLSVTEPKKIEEALQD 6
            DQ++GD   GVQTR+R +S   C + +F+S  EPK ++EAL D
Sbjct: 871  DQVLGDISKGVQTRSRIAS--ICEHYSFVSCLEPKHVDEALCD 911


>emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group]
          Length = 711

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/103 (35%), Positives = 55/103 (53%)
 Frame = -3

Query: 314 QPQLETQDEQIPSESPTEAEPPITEVHPASVTASDTLPISTEDVPSASAPSSKWTRDHPI 135
           +P   TQDE   S SP++A+  + E                +D P      +  ++DHPI
Sbjct: 124 KPSTSTQDEPSTSASPSQAQVEVEEE-------------KAQDPPMPLRIHTALSKDHPI 170

Query: 134 DQIIGDQEVGVQTRNRKSSCNFCFYTNFLSVTEPKKIEEALQD 6
           DQ++GD   GVQTR+R +S   C + +F+S  EPK ++EAL D
Sbjct: 171 DQVLGDISKGVQTRSRVAS--ICEHYSFVSCLEPKHVDEALCD 211


>emb|CAE04852.2| OSJNBa0084K01.24 [Oryza sativa Japonica Group]
          Length = 543

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/103 (35%), Positives = 55/103 (53%)
 Frame = -3

Query: 314 QPQLETQDEQIPSESPTEAEPPITEVHPASVTASDTLPISTEDVPSASAPSSKWTRDHPI 135
           +P   TQDE   S SP++A+  + E                +D P      +  ++DHPI
Sbjct: 124 KPSTSTQDEPSTSASPSQAQVEVEEE-------------KAQDPPMPLRIHTALSKDHPI 170

Query: 134 DQIIGDQEVGVQTRNRKSSCNFCFYTNFLSVTEPKKIEEALQD 6
           DQ++GD   GVQTR+R +S   C + +F+S  EPK ++EAL D
Sbjct: 171 DQVLGDISKGVQTRSRVAS--ICEHYSFVSCLEPKHVDEALCD 211


>gb|ABB47078.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/103 (34%), Positives = 55/103 (53%)
 Frame = -3

Query: 314  QPQLETQDEQIPSESPTEAEPPITEVHPASVTASDTLPISTEDVPSASAPSSKWTRDHPI 135
            +P   TQDE   S +P++A+  + E                +D P      +  ++DHPI
Sbjct: 829  KPSTSTQDEPSTSATPSQAQVEVEEE-------------KAQDPPMPPRIHTALSKDHPI 875

Query: 134  DQIIGDQEVGVQTRNRKSSCNFCFYTNFLSVTEPKKIEEALQD 6
            DQ++GD   GVQTR+R +S   C + +F+S  EPK ++EAL D
Sbjct: 876  DQVLGDISKGVQTRSRVAS--ICEHYSFVSCLEPKHVDEALCD 916


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