BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001092
         (3731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM67032.1| phytochrome a [Chrysanthemum seticuspe f. boreale]   1976   0.0  
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...  1793   0.0  
gb|ACC60969.1| phytochrome A [Vitis riparia]                         1788   0.0  
ref|XP_002318913.1| phytochrome [Populus trichocarpa] gi|2228572...  1750   0.0  
ref|NP_001234490.1| alternative transcript type 3 [Solanum lycop...  1743   0.0  

>dbj|BAM67032.1| phytochrome a [Chrysanthemum seticuspe f. boreale]
          Length = 1121

 Score = 1976 bits (5118), Expect = 0.0
 Identities = 985/1099 (89%), Positives = 1048/1099 (95%)
 Frame = +3

Query: 258  IIQQTTVDAKLHADFEESGDSFDYSASVHVKSTVGGPEQPRSDKVTTAYLHHIQKGKLIQ 437
            IIQQTTVDAKL ADFEESGDSFDYS+SVHV +TV   +QPRSDKVTTAYLHHIQKGKLIQ
Sbjct: 22   IIQQTTVDAKLDADFEESGDSFDYSSSVHVSTTVIDGQQPRSDKVTTAYLHHIQKGKLIQ 81

Query: 438  PFGCLLALDEKTFKIIAYSENAPEMLTMVSHAVPSVGENPVLGIGTDVRTIFAGPSANAL 617
            PFGCLLALDEKTFK+IA+SENAPEMLTMVSH VP+VGENPVLGIGTDVRTIFAGPSA AL
Sbjct: 82   PFGCLLALDEKTFKVIAFSENAPEMLTMVSHTVPTVGENPVLGIGTDVRTIFAGPSATAL 141

Query: 618  FKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDFEPVMPCQVPMTAAGALQSY 797
            FKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSL+IDFEPVMP +VPMTAAGALQSY
Sbjct: 142  FKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVMPNEVPMTAAGALQSY 201

Query: 798  KHAAKAIARLQSLPSGSIERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVVAETTKPGL 977
            KHAAKAIARLQSLPSGSIERLCDTMVQEVFELTGYDRVM YKFHDDDHGEVVAE TKPGL
Sbjct: 202  KHAAKAIARLQSLPSGSIERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVAEITKPGL 261

Query: 978  DPYLGLHYPATDIPQAARFLFMKNKVRMICDVRAKNVKVLQDKKLPFDLTLCGSTLRAPH 1157
            DPYLGLHYPATDIPQAARFLFMKNKVRMICD RAKNVKV+QDKKLPFDLTLCGS LRAPH
Sbjct: 262  DPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKNVKVVQDKKLPFDLTLCGSNLRAPH 321

Query: 1158 GCHAQYMENMTSIASLVMAVVVNDMDEEGENTDAAMHPQKRKKLWGLVVCHNTTPRFVPF 1337
             CH QYM+NMTSIASLVMAVV+NDMDEEG+ ++    PQKRKKLWGLVVCHNTTPRFVPF
Sbjct: 322  SCHLQYMDNMTSIASLVMAVVINDMDEEGQTSE----PQKRKKLWGLVVCHNTTPRFVPF 377

Query: 1338 PLRYACEFLAQVFAIHINKELELENQILEKNILRTQTLLCDLLMRDAPLGIVSQSPNIMD 1517
            PLR+ACEFLAQVFAIHINKELELENQILEKNILRTQTLLCDLLMRDAPLGIVSQSPNIMD
Sbjct: 378  PLRFACEFLAQVFAIHINKELELENQILEKNILRTQTLLCDLLMRDAPLGIVSQSPNIMD 437

Query: 1518 LVKCDGAALLYKNKVYRMGVSPTESQINDIVSWLYEYHMDSTGLSTDSLYDAGYPGALAL 1697
            LVKCDGAALLYKNKVYRMGVSPT+SQI+DIVSWLYEYHMDSTGLSTDSLYDAGYPGALAL
Sbjct: 438  LVKCDGAALLYKNKVYRMGVSPTDSQIHDIVSWLYEYHMDSTGLSTDSLYDAGYPGALAL 497

Query: 1698 GDVVCGMASVRLSDKDILFWFRSNTASEIRWAGAKHEKHEKDDGKRMHPRSSFKAFLEVV 1877
            GDVVCGMASVRL++KDILFWFRSNTASEIRW GAKHEK EKDDGKRMHPRSSFKAFLEVV
Sbjct: 498  GDVVCGMASVRLTEKDILFWFRSNTASEIRWGGAKHEKGEKDDGKRMHPRSSFKAFLEVV 557

Query: 1878 KTRSFPWKDFEMDAIHSLQIIMRNALKENGSVDLNTNVIQTTFNDLKLDGMQELEAVTSE 2057
            + RSFPWKDFEMDAIHSLQ+IMRNALK+N   +L T+VIQ  FN+LKLDGMQELEAVTSE
Sbjct: 558  RMRSFPWKDFEMDAIHSLQLIMRNALKDNEVAELKTDVIQAGFNELKLDGMQELEAVTSE 617

Query: 2058 MVRLIETASVPILAVDVDGLINGWNTKIAELTGLPVEKAIGIHFLKLVEDSSISTVQKMM 2237
            MVRLIETASVPILAVD DG +NGWNTKIAELTGL VE+AIG + L LVEDSS+ TVQKM+
Sbjct: 618  MVRLIETASVPILAVDADGSVNGWNTKIAELTGLTVEEAIGSNLLTLVEDSSVETVQKML 677

Query: 2238 NLALEGKEETGIQFEIKTHGSRSESGPITLVVNACASRDLHENVVGICCIAQDITHQKTI 2417
            NLALEGKEE+G+QFEIKT+GSR ESGPITLVVNACASRD+HENVVG+CCIAQDITHQKTI
Sbjct: 678  NLALEGKEESGVQFEIKTYGSRRESGPITLVVNACASRDVHENVVGVCCIAQDITHQKTI 737

Query: 2418 MDKFTRIEGDYKAIVHNPNPLIPPIFGTDEFGWCSEWNQAMTELSGLSRGEVMDKMLLGE 2597
            MDKFTRIEGDYKAIVHNPNPLIPPIFGTDEFGWCSEWNQAMTELSGLSR +V+DKMLLGE
Sbjct: 738  MDKFTRIEGDYKAIVHNPNPLIPPIFGTDEFGWCSEWNQAMTELSGLSREQVIDKMLLGE 797

Query: 2598 VFGTHTACCRLSNQEAFVNLSIVLNKAMTSQGSEKISFGFFAKTGKYIDCILSASKRVDS 2777
            VFGTH A CRLSN+E+F+NLSIVLNKAMTS+ +EKISFGFFAK GKY+DC+L ASKRVDS
Sbjct: 798  VFGTHAASCRLSNEESFINLSIVLNKAMTSEEAEKISFGFFAKNGKYVDCMLCASKRVDS 857

Query: 2778 EGTVTGLFCFLQLASKDLQQAIHFQRMSEQIAAKRLKALAYIRRQVKNPLSGIIFSRKMM 2957
            EGTVTGLFCFLQLASKDLQQAIHFQRMSEQIAAKRLKALAY+RRQ+KNPLSGIIFSRKMM
Sbjct: 858  EGTVTGLFCFLQLASKDLQQAIHFQRMSEQIAAKRLKALAYVRRQIKNPLSGIIFSRKMM 917

Query: 2958 EGTELGDEQKDLLHTSALCQRQLNRVLDDTDLDSIVDGHLELEMTEFTLQQILGASISQV 3137
            EGTELGDEQK+LLHTSALCQ+QLN+VLDDTDLDSIVDG+L+LEMTEFTLQQILGAS+SQV
Sbjct: 918  EGTELGDEQKELLHTSALCQKQLNKVLDDTDLDSIVDGYLDLEMTEFTLQQILGASVSQV 977

Query: 3138 MTKSNIMGIQIANNVEDDMLSEKLYGDSVRLQQVLADFLSLSVACTPPGGLLSIAAKMTK 3317
            MTKSNIMGIQI NNV +DML EKLYGDSVRLQQVLADFLSLSV+CTP GG+L+IAA + K
Sbjct: 978  MTKSNIMGIQIVNNVAEDMLLEKLYGDSVRLQQVLADFLSLSVSCTPAGGVLAIAANLGK 1037

Query: 3318 DHLAKSVQLVNLELRIMHTGGGVPEELLRQMFGNSTDATEEGISLVISRNLVKLMSGDVQ 3497
            D +AKSVQLVNLELRI HTGGGVPEELLRQMFG+S DATEEGISLVISRNL+KLMSGDVQ
Sbjct: 1038 DLIAKSVQLVNLELRITHTGGGVPEELLRQMFGSSMDATEEGISLVISRNLLKLMSGDVQ 1097

Query: 3498 YLRESTRSTFIISVELASA 3554
            YLRE+T+STFII+VELASA
Sbjct: 1098 YLREATKSTFIITVELASA 1116


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score = 1793 bits (4644), Expect = 0.0
 Identities = 877/1101 (79%), Positives = 1000/1101 (90%)
 Frame = +3

Query: 258  IIQQTTVDAKLHADFEESGDSFDYSASVHVKSTVGGPEQPRSDKVTTAYLHHIQKGKLIQ 437
            II QTTVDAKLHADFEESG SFDYS+SV   +  GG +QPRSDKVTTAYLHHIQKGKLIQ
Sbjct: 22   IIAQTTVDAKLHADFEESGSSFDYSSSVRF-TPAGGDQQPRSDKVTTAYLHHIQKGKLIQ 80

Query: 438  PFGCLLALDEKTFKIIAYSENAPEMLTMVSHAVPSVGENPVLGIGTDVRTIFAGPSANAL 617
            PFG LLALDEKTFK+IAYSENAPEMLTMVSHAVPSVGE+PVLGIGTDVRTIF+GPSA+AL
Sbjct: 81   PFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSASAL 140

Query: 618  FKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDFEPVMPCQVPMTAAGALQSY 797
             KALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSL+IDFEPV P +VPMTAAGALQSY
Sbjct: 141  HKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 200

Query: 798  KHAAKAIARLQSLPSGSIERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVVAETTKPGL 977
            K AAKAI RLQSLPSGS+ERLCDTMVQEVFELTGYDRVM YKFHDDDHGEVV+E TKPGL
Sbjct: 201  KLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGL 260

Query: 978  DPYLGLHYPATDIPQAARFLFMKNKVRMICDVRAKNVKVLQDKKLPFDLTLCGSTLRAPH 1157
            +PYLGLHYPATDIPQAARFLFMKNKVRMICD RAK+++VLQD+KLPFDLTLCGSTLRAPH
Sbjct: 261  EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAPH 320

Query: 1158 GCHAQYMENMTSIASLVMAVVVNDMDEEGENTDAAMHPQKRKKLWGLVVCHNTTPRFVPF 1337
             CH QYMENM SIASLVMAVVVND DEEGE++++   PQKRK+LWGLVVCH+TTPRFVPF
Sbjct: 321  SCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQ-PQKRKRLWGLVVCHHTTPRFVPF 379

Query: 1338 PLRYACEFLAQVFAIHINKELELENQILEKNILRTQTLLCDLLMRDAPLGIVSQSPNIMD 1517
            PLRYACEFLAQVFAIH+NKELELE+QILEKNILRTQTLLCD+LMRDAPLGIVSQSPN+MD
Sbjct: 380  PLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMD 439

Query: 1518 LVKCDGAALLYKNKVYRMGVSPTESQINDIVSWLYEYHMDSTGLSTDSLYDAGYPGALAL 1697
            LVKCDGAALLYKNKV+R+G++P++ Q++DI SWL EYHMDSTGLSTDSLYDAGYPGALAL
Sbjct: 440  LVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALAL 499

Query: 1698 GDVVCGMASVRLSDKDILFWFRSNTASEIRWAGAKHEKHEKDDGKRMHPRSSFKAFLEVV 1877
            GD VCGMA+V+++ KD LFWFRS+TA+E+RW GAKHE  EKDDG++MHPRSSFKAFLEVV
Sbjct: 500  GDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVV 559

Query: 1878 KTRSFPWKDFEMDAIHSLQIIMRNALKENGSVDLNTNVIQTTFNDLKLDGMQELEAVTSE 2057
            KTRS PWKD+EMDAIHSLQ+I+RNA K++ ++D+NTN I T  NDLK++GMQELEAVTSE
Sbjct: 560  KTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAVTSE 619

Query: 2058 MVRLIETASVPILAVDVDGLINGWNTKIAELTGLPVEKAIGIHFLKLVEDSSISTVQKMM 2237
            MVRLIETASVPILAVDVDGL+NGWNTKI+ELT LPV+KAIG+H L LVEDSS  TV+KM+
Sbjct: 620  MVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADTVKKML 679

Query: 2238 NLALEGKEETGIQFEIKTHGSRSESGPITLVVNACASRDLHENVVGICCIAQDITHQKTI 2417
            +LAL+G+EE  +QFEIKTHGS+ +SGPI+LVVNACASRDLHENVVG+C +AQDIT QKT+
Sbjct: 680  HLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLHENVVGVCFVAQDITSQKTV 739

Query: 2418 MDKFTRIEGDYKAIVHNPNPLIPPIFGTDEFGWCSEWNQAMTELSGLSRGEVMDKMLLGE 2597
            MDKFTRIEGDYKAIV NPNPLIPPIFGTDEFGWCSEWN AM +LSG +R EVMDKMLLGE
Sbjct: 740  MDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLLGE 799

Query: 2598 VFGTHTACCRLSNQEAFVNLSIVLNKAMTSQGSEKISFGFFAKTGKYIDCILSASKRVDS 2777
            VFGTH ACCRL N+EAFV L IVLN  MT + SEK+SFGFF+K+GKY++C+LS SK++D 
Sbjct: 800  VFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLSVSKKLDR 859

Query: 2778 EGTVTGLFCFLQLASKDLQQAIHFQRMSEQIAAKRLKALAYIRRQVKNPLSGIIFSRKMM 2957
            EG VTG+FCFLQLAS++LQQA+H QR+SEQ A KRLKALAYI+RQ+KNPLSGIIFSRKMM
Sbjct: 860  EGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGIIFSRKMM 919

Query: 2958 EGTELGDEQKDLLHTSALCQRQLNRVLDDTDLDSIVDGHLELEMTEFTLQQILGASISQV 3137
            E T+LG+EQ+ +LHTSA CQRQL+++LDD DLDSI++G+L+LEM EFTL+++L ASISQV
Sbjct: 920  EDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVLVASISQV 979

Query: 3138 MTKSNIMGIQIANNVEDDMLSEKLYGDSVRLQQVLADFLSLSVACTPPGGLLSIAAKMTK 3317
            M KSN  GIQI N+ E+ +++E LYGD +RLQQVLADFL +SV  TP GG LS+AA + K
Sbjct: 980  MIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGGQLSVAASLIK 1039

Query: 3318 DHLAKSVQLVNLELRIMHTGGGVPEELLRQMFGNSTDATEEGISLVISRNLVKLMSGDVQ 3497
            D L +SV LV+LELRI H G GVPE+LL QMFGN+ DA+EEGISL+ISR LVKLM+GDVQ
Sbjct: 1040 DRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGISLLISRKLVKLMNGDVQ 1099

Query: 3498 YLRESTRSTFIISVELASAHR 3560
            YLRE+ +STFIIS+ELA+A +
Sbjct: 1100 YLREAGKSTFIISIELAAARK 1120


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score = 1788 bits (4632), Expect = 0.0
 Identities = 875/1101 (79%), Positives = 999/1101 (90%)
 Frame = +3

Query: 258  IIQQTTVDAKLHADFEESGDSFDYSASVHVKSTVGGPEQPRSDKVTTAYLHHIQKGKLIQ 437
            II QTTVDAKLHADFEESG SFDYS+SV   +  GG +QPRSDKVTTAYLHHIQKGKLIQ
Sbjct: 22   IIAQTTVDAKLHADFEESGSSFDYSSSVRF-TPAGGDQQPRSDKVTTAYLHHIQKGKLIQ 80

Query: 438  PFGCLLALDEKTFKIIAYSENAPEMLTMVSHAVPSVGENPVLGIGTDVRTIFAGPSANAL 617
            PFG LLALD+KTFK+IAYSENAPEMLTMVSHAVPSVGE+PVLGIGTDVRTIF+GPSA+AL
Sbjct: 81   PFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSASAL 140

Query: 618  FKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDFEPVMPCQVPMTAAGALQSY 797
             KALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSL+IDFEPV P +VPMTAAGALQSY
Sbjct: 141  HKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 200

Query: 798  KHAAKAIARLQSLPSGSIERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVVAETTKPGL 977
            K AAKAI RLQSLPSGS+ERLCDTMVQEVFELTGYDRVM YKFHDDDHGEVV+E TKPGL
Sbjct: 201  KLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGL 260

Query: 978  DPYLGLHYPATDIPQAARFLFMKNKVRMICDVRAKNVKVLQDKKLPFDLTLCGSTLRAPH 1157
            +PYLGLHYPATDIPQAARFLFMKNKVRMICD RAK+++VLQD+KLPFDLTLCGSTLRAPH
Sbjct: 261  EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAPH 320

Query: 1158 GCHAQYMENMTSIASLVMAVVVNDMDEEGENTDAAMHPQKRKKLWGLVVCHNTTPRFVPF 1337
             CH QYMENM SIASLVMAVVVND DEEGE++++   PQKRK+LWGLVVCH+TTPRFVPF
Sbjct: 321  SCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQ-PQKRKRLWGLVVCHHTTPRFVPF 379

Query: 1338 PLRYACEFLAQVFAIHINKELELENQILEKNILRTQTLLCDLLMRDAPLGIVSQSPNIMD 1517
            PLRYACEFLAQVFAIH+NKELELE+QILEKNILRTQTLLCD+LMRDAPLGIVSQSPN+MD
Sbjct: 380  PLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMD 439

Query: 1518 LVKCDGAALLYKNKVYRMGVSPTESQINDIVSWLYEYHMDSTGLSTDSLYDAGYPGALAL 1697
            LVKCDGAALLYKNKV+R+G++P++ Q++DI SWL EYHMDSTGLSTDSLYDAGYPGALAL
Sbjct: 440  LVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALAL 499

Query: 1698 GDVVCGMASVRLSDKDILFWFRSNTASEIRWAGAKHEKHEKDDGKRMHPRSSFKAFLEVV 1877
            GD VCGMA+V+++ KD LFWFRS+TA+E+RW GAKHE  EKDDG++MHPRSSFKAFLEVV
Sbjct: 500  GDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVV 559

Query: 1878 KTRSFPWKDFEMDAIHSLQIIMRNALKENGSVDLNTNVIQTTFNDLKLDGMQELEAVTSE 2057
            KTRS PWKD+EMDAIHSLQ+I+RNA K++ ++D+NTN I T  NDLK++GMQELEAVTSE
Sbjct: 560  KTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAVTSE 619

Query: 2058 MVRLIETASVPILAVDVDGLINGWNTKIAELTGLPVEKAIGIHFLKLVEDSSISTVQKMM 2237
            MVRLIETASVPILAVDVDGL+NGWNTKI+ELT LPV+KAIG+H L LVEDSS  TV+KM+
Sbjct: 620  MVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADTVKKML 679

Query: 2238 NLALEGKEETGIQFEIKTHGSRSESGPITLVVNACASRDLHENVVGICCIAQDITHQKTI 2417
            +LAL+G+EE  +QFEIKTHGS+ +SGPI+LVVNACASRDL ENVVG+C +AQDIT QKT+
Sbjct: 680  HLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLDENVVGVCFVAQDITSQKTV 739

Query: 2418 MDKFTRIEGDYKAIVHNPNPLIPPIFGTDEFGWCSEWNQAMTELSGLSRGEVMDKMLLGE 2597
            MDKFTRIEGDYKAIV NPNPLIPPIFGTDEFGWCSEWN AM +LSG +R EVMDKMLLGE
Sbjct: 740  MDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLLGE 799

Query: 2598 VFGTHTACCRLSNQEAFVNLSIVLNKAMTSQGSEKISFGFFAKTGKYIDCILSASKRVDS 2777
            VFGTH ACCRL N+EAFV L IVLN  MT + SEK+SFGFF+K+GKY++C+LS SK++D 
Sbjct: 800  VFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLSVSKKLDR 859

Query: 2778 EGTVTGLFCFLQLASKDLQQAIHFQRMSEQIAAKRLKALAYIRRQVKNPLSGIIFSRKMM 2957
            EG VTG+FCFLQLAS++LQQA+H QR+SEQ A KRLKALAYI+RQ+KNPLSGIIFSRKMM
Sbjct: 860  EGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGIIFSRKMM 919

Query: 2958 EGTELGDEQKDLLHTSALCQRQLNRVLDDTDLDSIVDGHLELEMTEFTLQQILGASISQV 3137
            E T+LG+EQ+ +LHTSA CQRQL+++LDD DLDSI++G+L+LEM EFTL+++L ASISQV
Sbjct: 920  EDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVLVASISQV 979

Query: 3138 MTKSNIMGIQIANNVEDDMLSEKLYGDSVRLQQVLADFLSLSVACTPPGGLLSIAAKMTK 3317
            M KSN  GIQI N+ E+ +++E LYGD +RLQQVLADFL +SV  TP GG LS+AA + K
Sbjct: 980  MIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGGQLSVAASLIK 1039

Query: 3318 DHLAKSVQLVNLELRIMHTGGGVPEELLRQMFGNSTDATEEGISLVISRNLVKLMSGDVQ 3497
            D L +SV LV+LELRI H G GVPE+LL QMFGN+ DA+EEGISL+ISR LVKLM+GDVQ
Sbjct: 1040 DRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGISLLISRKLVKLMNGDVQ 1099

Query: 3498 YLRESTRSTFIISVELASAHR 3560
            YLRE+ +STFIIS+ELA+A +
Sbjct: 1100 YLREAGKSTFIISIELAAARK 1120


>ref|XP_002318913.1| phytochrome [Populus trichocarpa] gi|222857289|gb|EEE94836.1|
            phytochrome [Populus trichocarpa]
          Length = 1126

 Score = 1750 bits (4532), Expect = 0.0
 Identities = 854/1101 (77%), Positives = 979/1101 (88%)
 Frame = +3

Query: 258  IIQQTTVDAKLHADFEESGDSFDYSASVHVKSTVGGPEQPRSDKVTTAYLHHIQKGKLIQ 437
            II QTTVDAKLHADFEESG SFDYS+SV V  +VGG + PRSDKVTT YLHHIQKGKLIQ
Sbjct: 22   IIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTTYLHHIQKGKLIQ 81

Query: 438  PFGCLLALDEKTFKIIAYSENAPEMLTMVSHAVPSVGENPVLGIGTDVRTIFAGPSANAL 617
            PFGCLLALDEKTFK++AYSENAPE+LTMVSHAVPSVGE+PVLGIGTD+RTIF  PSA+AL
Sbjct: 82   PFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSASAL 141

Query: 618  FKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDFEPVMPCQVPMTAAGALQSY 797
             KA+GFG+VSLLNPILVHCKTSGKPFYAI+HRVTGSL+IDFEPV P +VPMTAAGALQSY
Sbjct: 142  QKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201

Query: 798  KHAAKAIARLQSLPSGSIERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVVAETTKPGL 977
            K AAKAI RLQSLPSGS+ERLCDTMVQEVFELTGYDR M YKFHDDDHGEVV+E TKPG+
Sbjct: 202  KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKPGM 261

Query: 978  DPYLGLHYPATDIPQAARFLFMKNKVRMICDVRAKNVKVLQDKKLPFDLTLCGSTLRAPH 1157
            +PYLGLHYPATDIPQA+RFLFMKNKVRMI D  AK+VKVLQD+KLPFDLTLCGSTLRAPH
Sbjct: 262  EPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPH 321

Query: 1158 GCHAQYMENMTSIASLVMAVVVNDMDEEGENTDAAMHPQKRKKLWGLVVCHNTTPRFVPF 1337
             CH QYMENM SIASLVMAVVVND DE+G+  D+ ++PQKRK+LWGLVVCHNT+PRFVPF
Sbjct: 322  SCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDS-VNPQKRKRLWGLVVCHNTSPRFVPF 380

Query: 1338 PLRYACEFLAQVFAIHINKELELENQILEKNILRTQTLLCDLLMRDAPLGIVSQSPNIMD 1517
            PLRYACEFLAQVFAIH+NKELELENQI+EKNILRTQTLLCD+LMRDAPLGIV+QSPNIMD
Sbjct: 381  PLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMD 440

Query: 1518 LVKCDGAALLYKNKVYRMGVSPTESQINDIVSWLYEYHMDSTGLSTDSLYDAGYPGALAL 1697
            LVKCDGA L Y+NK++R+G++P++ Q+ DI  WL EYHMDSTGLSTDSLYDAGYPGALAL
Sbjct: 441  LVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALAL 500

Query: 1698 GDVVCGMASVRLSDKDILFWFRSNTASEIRWAGAKHEKHEKDDGKRMHPRSSFKAFLEVV 1877
            GDVVCGMA+VR++ KD+LFWFRS TA+EIRW GAKHE  EKDDG+RMHPRSSFKAFLEVV
Sbjct: 501  GDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEVV 560

Query: 1878 KTRSFPWKDFEMDAIHSLQIIMRNALKENGSVDLNTNVIQTTFNDLKLDGMQELEAVTSE 2057
            KTRS PWKD+EMDAIHSLQ+I+RNA K+  ++D++T  I    +DLK++GMQELEAVTSE
Sbjct: 561  KTRSLPWKDYEMDAIHSLQLILRNAFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTSE 620

Query: 2058 MVRLIETASVPILAVDVDGLINGWNTKIAELTGLPVEKAIGIHFLKLVEDSSISTVQKMM 2237
            MVRLIETA+VPILAVDVDGL+NGWNTKI+ELTGL V+KAIG H L LVEDSS+  V++M+
Sbjct: 621  MVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRML 680

Query: 2238 NLALEGKEETGIQFEIKTHGSRSESGPITLVVNACASRDLHENVVGICCIAQDITHQKTI 2417
             LAL+GKEE  IQFEIKTHGS+SE GPI LVVNACASRDLHENVVG+C + QDIT QK +
Sbjct: 681  FLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKMV 740

Query: 2418 MDKFTRIEGDYKAIVHNPNPLIPPIFGTDEFGWCSEWNQAMTELSGLSRGEVMDKMLLGE 2597
            MDKFTRIEGDYKAIV N NPLIPPIFGTDEFGWCSEWN AMT L+G  R EV+DKMLLGE
Sbjct: 741  MDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLGE 800

Query: 2598 VFGTHTACCRLSNQEAFVNLSIVLNKAMTSQGSEKISFGFFAKTGKYIDCILSASKRVDS 2777
            VFG + ACCRL NQEAFVNL +VLN AMT Q SEK+SFGFFA+TGKY++C+L  SK++D 
Sbjct: 801  VFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLDR 860

Query: 2778 EGTVTGLFCFLQLASKDLQQAIHFQRMSEQIAAKRLKALAYIRRQVKNPLSGIIFSRKMM 2957
            EG VTG+FCFLQLAS++LQQA+H QR+SEQ A KRLKALAY++RQ+ NPLSGIIFS KMM
Sbjct: 861  EGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKRQIWNPLSGIIFSGKMM 920

Query: 2958 EGTELGDEQKDLLHTSALCQRQLNRVLDDTDLDSIVDGHLELEMTEFTLQQILGASISQV 3137
            EGTELG EQK+LLHTSA CQ QL+++LDD+DLDSI++G+L+LEM EFTL+++L A+ SQV
Sbjct: 921  EGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREVLVAATSQV 980

Query: 3138 MTKSNIMGIQIANNVEDDMLSEKLYGDSVRLQQVLADFLSLSVACTPPGGLLSIAAKMTK 3317
            M KSN  GI+I N+  ++ ++E LYGDS+RLQQVLADFL +SV  TP GGLLS++A +TK
Sbjct: 981  MMKSNEKGIRIINDAAEETMAETLYGDSIRLQQVLADFLQMSVNFTPSGGLLSVSASLTK 1040

Query: 3318 DHLAKSVQLVNLELRIMHTGGGVPEELLRQMFGNSTDATEEGISLVISRNLVKLMSGDVQ 3497
            D L +SV LV+LELRI H G G+PE LL QMFG  TDA+ EGISLVISR LVKLM+GDV+
Sbjct: 1041 DQLGQSVYLVHLELRIRHPGAGIPEALLDQMFGEDTDASVEGISLVISRKLVKLMNGDVR 1100

Query: 3498 YLRESTRSTFIISVELASAHR 3560
            Y+RE+ +S+FIISVELA  H+
Sbjct: 1101 YMREAGKSSFIISVELAGGHK 1121


>ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
            gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
            gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
            gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
            gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
          Length = 1123

 Score = 1743 bits (4513), Expect = 0.0
 Identities = 853/1099 (77%), Positives = 975/1099 (88%)
 Frame = +3

Query: 258  IIQQTTVDAKLHADFEESGDSFDYSASVHVKSTVGGPEQPRSDKVTTAYLHHIQKGKLIQ 437
            I+ QT++DAKLHADFEESGDSFDYS+SV V S  G  E+P+SDKVTTAYLH IQKGK IQ
Sbjct: 22   IVAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEEKPKSDKVTTAYLHQIQKGKFIQ 81

Query: 438  PFGCLLALDEKTFKIIAYSENAPEMLTMVSHAVPSVGENPVLGIGTDVRTIFAGPSANAL 617
            PFGCLLALDEKT K+IA+SENAPEMLTMVSHAVPSVGE+PVLGIGTD+RTIF GPS  AL
Sbjct: 82   PFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGPSGAAL 141

Query: 618  FKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLVIDFEPVMPCQVPMTAAGALQSY 797
             KALGFGEVSLLNP+LVHCK SGKPFYAI+HRVTGSL++DFEPV P +VPMTAAGALQSY
Sbjct: 142  QKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLILDFEPVKPYEVPMTAAGALQSY 201

Query: 798  KHAAKAIARLQSLPSGSIERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVVAETTKPGL 977
            K AAKAI RLQSLPSGS+ERLCDTMVQEVFELTGYDRVM YKFH+DDHGEVV+E TKPGL
Sbjct: 202  KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHEDDHGEVVSEITKPGL 261

Query: 978  DPYLGLHYPATDIPQAARFLFMKNKVRMICDVRAKNVKVLQDKKLPFDLTLCGSTLRAPH 1157
            +PYLGLHYPATDIPQAARFLFMKNKVRMICD RAK+VKV+QD+KLPFDLTLCGSTLRAPH
Sbjct: 262  EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPH 321

Query: 1158 GCHAQYMENMTSIASLVMAVVVNDMDEEGENTDAAMHPQKRKKLWGLVVCHNTTPRFVPF 1337
             CH QYMENM SIASLVMAVVVND DEEGE++D++   QKRK+LWGLVVCHNTTPRFVPF
Sbjct: 322  YCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQS-QKRKRLWGLVVCHNTTPRFVPF 380

Query: 1338 PLRYACEFLAQVFAIHINKELELENQILEKNILRTQTLLCDLLMRDAPLGIVSQSPNIMD 1517
            PLRYACEFLAQVFAIH+NKELELENQ LEKNILRTQTLLCD+LMRDAPLGIVSQSPNIMD
Sbjct: 381  PLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMD 440

Query: 1518 LVKCDGAALLYKNKVYRMGVSPTESQINDIVSWLYEYHMDSTGLSTDSLYDAGYPGALAL 1697
            LVKCDGAALLYKNK++R+G++P++ Q+ DIVSWL EYH DSTGLSTDSLYDAG+PGALAL
Sbjct: 441  LVKCDGAALLYKNKIHRLGMNPSDFQLQDIVSWLCEYHTDSTGLSTDSLYDAGFPGALAL 500

Query: 1698 GDVVCGMASVRLSDKDILFWFRSNTASEIRWAGAKHEKHEKDDGKRMHPRSSFKAFLEVV 1877
            GD VCGMA+VR+SDKD LFWFRS+TA+E+RW GAKHE  EKDDG++MHPRSSFKAFLEVV
Sbjct: 501  GDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVV 560

Query: 1878 KTRSFPWKDFEMDAIHSLQIIMRNALKENGSVDLNTNVIQTTFNDLKLDGMQELEAVTSE 2057
            KTRS PWKD+EMDAIHSLQ+I+RNA K+   V+ NTN I    NDLK+DGMQELE+VT+E
Sbjct: 561  KTRSIPWKDYEMDAIHSLQLILRNAFKDAEVVNSNTNSIYKKLNDLKIDGMQELESVTAE 620

Query: 2058 MVRLIETASVPILAVDVDGLINGWNTKIAELTGLPVEKAIGIHFLKLVEDSSISTVQKMM 2237
            MVRLIETA VPILAVDVDG +NGWNTKIAELTGLPV++AIG H L LVEDSS+ TV KM+
Sbjct: 621  MVRLIETALVPILAVDVDGQVNGWNTKIAELTGLPVDEAIGKHLLTLVEDSSVDTVNKML 680

Query: 2238 NLALEGKEETGIQFEIKTHGSRSESGPITLVVNACASRDLHENVVGICCIAQDITHQKTI 2417
             LAL+GKEE  ++FEIKTHG   +S PI+L+VNACAS+D+ +NVVG+C +A DIT QK+I
Sbjct: 681  ELALQGKEEKNVEFEIKTHGPSRDSSPISLIVNACASKDVRDNVVGVCFMAHDITGQKSI 740

Query: 2418 MDKFTRIEGDYKAIVHNPNPLIPPIFGTDEFGWCSEWNQAMTELSGLSRGEVMDKMLLGE 2597
            MDKFTRIEGDY+AI+ NP+PLIPPIFGTD+FGWCSEWN AMT+L+G  R +VMDKMLLGE
Sbjct: 741  MDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNTAMTKLTGWRRDDVMDKMLLGE 800

Query: 2598 VFGTHTACCRLSNQEAFVNLSIVLNKAMTSQGSEKISFGFFAKTGKYIDCILSASKRVDS 2777
            VFGT  ACCRL NQEAFVN  +VLN A+T Q SEKI FGFFA+ GKY++C+L  SKR+D 
Sbjct: 801  VFGTQAACCRLKNQEAFVNFGVVLNNAITGQESEKIPFGFFARYGKYVECLLCVSKRLDK 860

Query: 2778 EGTVTGLFCFLQLASKDLQQAIHFQRMSEQIAAKRLKALAYIRRQVKNPLSGIIFSRKMM 2957
            EG VTGLFCFLQLAS +LQQA++ QR+SEQ A KRLK LAYIRRQ++NPLSGIIFSRKM+
Sbjct: 861  EGAVTGLFCFLQLASHELQQALYVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFSRKML 920

Query: 2958 EGTELGDEQKDLLHTSALCQRQLNRVLDDTDLDSIVDGHLELEMTEFTLQQILGASISQV 3137
            EGT LG+EQK++LHTSA CQRQLN++LDDTDLDSI+DG+L+LEM EF L ++L ASISQV
Sbjct: 921  EGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVLVASISQV 980

Query: 3138 MTKSNIMGIQIANNVEDDMLSEKLYGDSVRLQQVLADFLSLSVACTPPGGLLSIAAKMTK 3317
            M KSN   I I+N++ +D+L+E LYGDS RLQQVLA+FL +SV  TP GG LSI+ ++TK
Sbjct: 981  MMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNATPSGGQLSISGRLTK 1040

Query: 3318 DHLAKSVQLVNLELRIMHTGGGVPEELLRQMFGNSTDATEEGISLVISRNLVKLMSGDVQ 3497
            D + +SVQL  LE RI HTGGGVPEELL QMFG+  DA+EEGISL++SR LVKLM+G+VQ
Sbjct: 1041 DRIGESVQLALLEFRIRHTGGGVPEELLGQMFGSEADASEEGISLLVSRKLVKLMNGEVQ 1100

Query: 3498 YLRESTRSTFIISVELASA 3554
            YLRE+ +STFIISVELA A
Sbjct: 1101 YLREAGQSTFIISVELAVA 1119