BLASTX nr result

ID: Atractylodes22_contig00001068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001068
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni...   337   3e-90
gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]                  335   6e-90
emb|CBI30239.3| unnamed protein product [Vitis vinifera]              334   2e-89
ref|XP_004171272.1| PREDICTED: splicing factor U2af small subuni...   330   2e-88
ref|XP_004143302.1| PREDICTED: splicing factor U2af small subuni...   330   2e-88

>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
           vinifera]
          Length = 343

 Score =  337 bits (863), Expect = 3e-90
 Identities = 158/180 (87%), Positives = 164/180 (91%)
 Frame = +3

Query: 69  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 248
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 249 GVDPQGQPLDPSKIQDHXXXXXXXXXXXXGKYGEIESLNICDNLADHMVGNVYAQFREEE 428
           GVDPQGQPLDP KIQ+H             KYGEIESLNICDNLADHMVGNVY QFREEE
Sbjct: 61  GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 429 HAAAALQNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISKEL 608
           HAA AL+NL+GRFYAGRPIIVDFSPVTDFREATCRQYEEN+CNRGGYCNFMHLKKIS+EL
Sbjct: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISREL 180


>gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
          Length = 310

 Score =  335 bits (860), Expect = 6e-90
 Identities = 159/180 (88%), Positives = 162/180 (90%)
 Frame = +3

Query: 69  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 248
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL+NMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60

Query: 249 GVDPQGQPLDPSKIQDHXXXXXXXXXXXXGKYGEIESLNICDNLADHMVGNVYAQFREEE 428
           GVDPQGQPLDP KIQ H             KYGEIESLNICDNLADHMVGNVY QFREEE
Sbjct: 61  GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 429 HAAAALQNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISKEL 608
           HA  AL+NLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS+EL
Sbjct: 121 HAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180


>emb|CBI30239.3| unnamed protein product [Vitis vinifera]
          Length = 191

 Score =  334 bits (856), Expect = 2e-89
 Identities = 156/179 (87%), Positives = 163/179 (91%)
 Frame = +3

Query: 69  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 248
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 249 GVDPQGQPLDPSKIQDHXXXXXXXXXXXXGKYGEIESLNICDNLADHMVGNVYAQFREEE 428
           GVDPQGQPLDP KIQ+H             KYGEIESLNICDNLADHMVGNVY QFREEE
Sbjct: 61  GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 429 HAAAALQNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISKE 605
           HAA AL+NL+GRFYAGRPIIVDFSPVTDFREATCRQYEEN+CNRGGYCNFMHLKKIS++
Sbjct: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISRQ 179


>ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
           sativus]
          Length = 317

 Score =  330 bits (846), Expect = 2e-88
 Identities = 156/180 (86%), Positives = 161/180 (89%)
 Frame = +3

Query: 69  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 248
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 249 GVDPQGQPLDPSKIQDHXXXXXXXXXXXXGKYGEIESLNICDNLADHMVGNVYAQFREEE 428
           GVDPQGQ LDP K+QDH             KYG++ESLNICDNLADHMVGNVY QFREEE
Sbjct: 61  GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120

Query: 429 HAAAALQNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISKEL 608
            AA AL NL+GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS+EL
Sbjct: 121 QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180


>ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
           sativus]
          Length = 317

 Score =  330 bits (846), Expect = 2e-88
 Identities = 156/180 (86%), Positives = 161/180 (89%)
 Frame = +3

Query: 69  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 248
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 249 GVDPQGQPLDPSKIQDHXXXXXXXXXXXXGKYGEIESLNICDNLADHMVGNVYAQFREEE 428
           GVDPQGQ LDP K+QDH             KYG++ESLNICDNLADHMVGNVY QFREEE
Sbjct: 61  GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120

Query: 429 HAAAALQNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISKEL 608
            AA AL NL+GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS+EL
Sbjct: 121 QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180


Top