BLASTX nr result

ID: Atractylodes22_contig00001067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001067
         (1713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]                  351   4e-94
ref|XP_004139466.1| PREDICTED: splicing factor U2af small subuni...   340   7e-91
ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni...   338   2e-90
emb|CBI30239.3| unnamed protein product [Vitis vinifera]              338   2e-90
ref|XP_004171272.1| PREDICTED: splicing factor U2af small subuni...   332   2e-88

>gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
          Length = 310

 Score =  351 bits (900), Expect = 4e-94
 Identities = 191/313 (61%), Positives = 199/313 (63%), Gaps = 1/313 (0%)
 Frame = -1

Query: 1623 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDSITP 1444
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL+NMYQRPD ITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60

Query: 1443 GVDPQGQPLDPRKIQDHXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1264
            GVDPQGQPLDPRKIQ H           LSKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61   GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 1263 HAANALQNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS-XX 1087
            HA  AL+NLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS   
Sbjct: 121  HAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180

Query: 1086 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDYADQRHHDXXXXXXXXXXX 907
                                                    D  +QR+HD           
Sbjct: 181  RRQLFGRYRRRHSRSRSRSPQAHRGHGDRPHGGRGYGRRDDDRNQRYHD-KGRRPRSRSP 239

Query: 906  XXXXXXXXXXXXXXXXPVREGSAERRAKIEQWNREREQSDSRPKTATXXXXXXXXXXXGA 727
                            PVRE S ERRAKI QWNRE+EQ+D+                   
Sbjct: 240  GHRGRSRSPPGRRDRSPVRENSEERRAKIAQWNREKEQADTGNNDVNHDVTDNHANGFQ- 298

Query: 726  VPNGDQYYDSRQQ 688
              NG+ YYD  QQ
Sbjct: 299  -DNGEDYYDHPQQ 310


>ref|XP_004139466.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
            sativus] gi|449510609|ref|XP_004163713.1| PREDICTED:
            splicing factor U2af small subunit A-like [Cucumis
            sativus]
          Length = 326

 Score =  340 bits (872), Expect = 7e-91
 Identities = 177/281 (62%), Positives = 188/281 (66%), Gaps = 2/281 (0%)
 Frame = -1

Query: 1623 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDSITP 1444
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPD ITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 1443 GVDPQGQPLDPRKIQDHXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1264
            GVD QG P+DPR IQDH           L+KYGEIESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61   GVDAQGNPIDPRNIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 1263 HAANALQNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISXXX 1084
             AANAL+NLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN+CNRGGYCNFMHLK+I    
Sbjct: 121  QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180

Query: 1083 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDYADQR--HHDXXXXXXXXXX 910
                                                      D+R  +H+          
Sbjct: 181  RHELFAMYRRRHSHSRSRSRSPYRHRSYEERSYGKHGHSRRYDERDAYHESRSRRHRTTS 240

Query: 909  XXXXXXXXXXXXXXXXXPVREGSAERRAKIEQWNREREQSD 787
                             PVREGS ERRAKIEQWN+EREQ +
Sbjct: 241  PGHRSRSRSPRGRKNRSPVREGSEERRAKIEQWNKEREQGN 281


>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis vinifera]
          Length = 343

 Score =  338 bits (868), Expect = 2e-90
 Identities = 160/177 (90%), Positives = 165/177 (93%)
 Frame = -1

Query: 1623 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDSITP 1444
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPD +TP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 1443 GVDPQGQPLDPRKIQDHXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1264
            GVDPQGQPLDPRKIQ+H           LSKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61   GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 1263 HAANALQNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 1093
            HAANAL+NL+GRFYAGRPIIVDFSPVTDFREATCRQYEEN+CNRGGYCNFMHLKKIS
Sbjct: 121  HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKIS 177


>emb|CBI30239.3| unnamed protein product [Vitis vinifera]
          Length = 191

 Score =  338 bits (868), Expect = 2e-90
 Identities = 160/177 (90%), Positives = 165/177 (93%)
 Frame = -1

Query: 1623 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDSITP 1444
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPD +TP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 1443 GVDPQGQPLDPRKIQDHXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1264
            GVDPQGQPLDPRKIQ+H           LSKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61   GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 1263 HAANALQNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 1093
            HAANAL+NL+GRFYAGRPIIVDFSPVTDFREATCRQYEEN+CNRGGYCNFMHLKKIS
Sbjct: 121  HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKIS 177


>ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
            sativus]
          Length = 317

 Score =  332 bits (851), Expect = 2e-88
 Identities = 158/177 (89%), Positives = 162/177 (91%)
 Frame = -1

Query: 1623 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDSITP 1444
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPD ITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 1443 GVDPQGQPLDPRKIQDHXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1264
            GVDPQGQ LDPRK+QDH           LSKYG++ESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61   GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120

Query: 1263 HAANALQNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 1093
             AANAL NL+GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS
Sbjct: 121  QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177


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