BLASTX nr result

ID: Atractylodes22_contig00001059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001059
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313617.1| predicted protein [Populus trichocarpa] gi|2...   220   5e-55
ref|XP_002281037.1| PREDICTED: 60S ribosomal protein L30 [Vitis ...   220   5e-55
ref|XP_002528991.1| 60S ribosomal protein L30, putative [Ricinus...   219   6e-55
gb|ADB02906.1| 60S ribosomal protein L30 [Jatropha curcas]            219   8e-55
gb|AFK43355.1| unknown [Lotus japonicus]                              218   2e-54

>ref|XP_002313617.1| predicted protein [Populus trichocarpa]
           gi|224131730|ref|XP_002328094.1| predicted protein
           [Populus trichocarpa] gi|118483895|gb|ABK93838.1|
           unknown [Populus trichocarpa]
           gi|222837609|gb|EEE75974.1| predicted protein [Populus
           trichocarpa] gi|222850025|gb|EEE87572.1| predicted
           protein [Populus trichocarpa]
          Length = 112

 Score =  220 bits (560), Expect = 5e-55
 Identities = 107/111 (96%), Positives = 109/111 (98%)
 Frame = +2

Query: 380 MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLESLRNSKGKLIIISNNCPPLRKSEI 559
           MVA KKTKKTHESINNRLALVMKSGKYTLGYKTVL+SLRNSKGKLIIISNNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIISNNCPPLRKSEI 60

Query: 560 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGD 712
           EYYAMLAKVGVHHYNGNNVDLGTACGKYFRV CLSIIDPGDSDIIKS+PGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKSVPGD 111


>ref|XP_002281037.1| PREDICTED: 60S ribosomal protein L30 [Vitis vinifera]
           gi|296082469|emb|CBI21474.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score =  220 bits (560), Expect = 5e-55
 Identities = 106/111 (95%), Positives = 111/111 (100%)
 Frame = +2

Query: 380 MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLESLRNSKGKLIIISNNCPPLRKSEI 559
           MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVL+SLR+SKGKLI+ISNNCPPLRKSEI
Sbjct: 1   MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLILISNNCPPLRKSEI 60

Query: 560 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGD 712
           EYYAMLAKVGVHH+NGNNVDLGTACGKYFRVSCLSIIDPGDSDIIK+LPGD
Sbjct: 61  EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGD 111


>ref|XP_002528991.1| 60S ribosomal protein L30, putative [Ricinus communis]
           gi|223531581|gb|EEF33410.1| 60S ribosomal protein L30,
           putative [Ricinus communis]
          Length = 112

 Score =  219 bits (559), Expect = 6e-55
 Identities = 106/111 (95%), Positives = 108/111 (97%)
 Frame = +2

Query: 380 MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLESLRNSKGKLIIISNNCPPLRKSEI 559
           M AGKKTKKTHESINNRLALVMKSGKYTLGYKTVL SLR SKGKLIIISNNCPPLRKSEI
Sbjct: 1   MAAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIIISNNCPPLRKSEI 60

Query: 560 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGD 712
           EYYAML+KVGVHHYNGNNVDLGTACGKYFRVSCLSI+DPGDSDIIKSLPGD
Sbjct: 61  EYYAMLSKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGD 111


>gb|ADB02906.1| 60S ribosomal protein L30 [Jatropha curcas]
          Length = 112

 Score =  219 bits (558), Expect = 8e-55
 Identities = 105/111 (94%), Positives = 110/111 (99%)
 Frame = +2

Query: 380 MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLESLRNSKGKLIIISNNCPPLRKSEI 559
           MV+GKKTKKTHESINNRLALVMKSG+YTLGYKTVL SLR+SKGKLI+ISNNCPPLRKSEI
Sbjct: 1   MVSGKKTKKTHESINNRLALVMKSGRYTLGYKTVLRSLRSSKGKLIVISNNCPPLRKSEI 60

Query: 560 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGD 712
           EYYAML+KVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGD
Sbjct: 61  EYYAMLSKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGD 111


>gb|AFK43355.1| unknown [Lotus japonicus]
          Length = 112

 Score =  218 bits (554), Expect = 2e-54
 Identities = 105/112 (93%), Positives = 110/112 (98%)
 Frame = +2

Query: 380 MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLESLRNSKGKLIIISNNCPPLRKSEI 559
           MVA KKTKKTHESINNRLALVMKSGKYTLGYKTVL+SLR+SKGKLIII+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 560 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDQ 715
           EYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSIIDPGDSDIIK+LPGDQ
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPGDQ 112


Top