BLASTX nr result

ID: Atractylodes22_contig00001000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001000
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...    77   1e-12
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]    77   1e-12
emb|CBI36671.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002318725.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
           [Vitis vinifera]
          Length = 2177

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = +3

Query: 96  LQEANEGITLNVQDIDAYWLQRKISQAYEHQIDPQQSQKL 215
           +QEANEG+TLNVQDIDAYWLQRKISQAYE QIDPQQ QKL
Sbjct: 266 MQEANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQCQKL 305


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = +3

Query: 96  LQEANEGITLNVQDIDAYWLQRKISQAYEHQIDPQQSQKL 215
           +QEANEG+TLNVQDIDAYWLQRKISQAYE QIDPQQ QKL
Sbjct: 266 MQEANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQCQKL 305


>emb|CBI36671.3| unnamed protein product [Vitis vinifera]
          Length = 1405

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = +3

Query: 102 EANEGITLNVQDIDAYWLQRKISQAYEHQIDPQQSQKL 215
           EANEG+TLNVQDIDAYWLQRKISQAYE QIDPQQ QKL
Sbjct: 196 EANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQCQKL 233


>ref|XP_002318725.1| predicted protein [Populus trichocarpa] gi|222859398|gb|EEE96945.1|
           predicted protein [Populus trichocarpa]
          Length = 2175

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = +3

Query: 96  LQEANEGITLNVQDIDAYWLQRKISQAYEHQIDPQQSQKL 215
           ++ ANEG+ LNVQDIDAYWLQRKISQAYE QIDPQQ QKL
Sbjct: 269 MRGANEGMNLNVQDIDAYWLQRKISQAYEQQIDPQQCQKL 308


>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
           predicted protein [Populus trichocarpa]
          Length = 2157

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = +3

Query: 102 EANEGITLNVQDIDAYWLQRKISQAYEHQIDPQQSQKL 215
           EANEG+ LNVQDIDAYWLQRKIS AYE QIDPQQ QKL
Sbjct: 268 EANEGLNLNVQDIDAYWLQRKISLAYEQQIDPQQCQKL 305


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