BLASTX nr result

ID: Atractylodes22_contig00000997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000997
         (1455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA81884.1| nuclear RNA binding protein-like [Solanum tuberosum]   224   4e-56
ref|XP_002303373.1| predicted protein [Populus trichocarpa] gi|2...   221   4e-55
gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana ...   221   4e-55
ref|XP_002272562.2| PREDICTED: uncharacterized protein LOC100259...   221   5e-55
emb|CBI16673.3| unnamed protein product [Vitis vinifera]              221   5e-55

>gb|ABA81884.1| nuclear RNA binding protein-like [Solanum tuberosum]
          Length = 363

 Score =  224 bits (571), Expect = 4e-56
 Identities = 134/280 (47%), Positives = 158/280 (56%), Gaps = 5/280 (1%)
 Frame = +1

Query: 466  FNRDSADNENSYGTNNGFSGGYRPSDDGDVEKSSEXXXXXXXXXXXXXXXXXXXXXXDE- 642
            FN+D A +EN++G+NNG SG Y   +DG+  K SE                       + 
Sbjct: 88   FNQDFAADENAFGSNNGSSGRYSAPEDGESGKVSERRGGYGGSRGGFHGGRRGGFNNGDS 147

Query: 643  ---EGERPRRVFERRSGTGRGNEF-KREGAGRGNWGTATDDATLEPEEPVIEGEKNVDSD 810
               EGERPRRVF+RRSGTGRGNEF KREG+GRGNWGT  DD   E E PVI+GEK V+++
Sbjct: 148  AEGEGERPRRVFDRRSGTGRGNEFIKREGSGRGNWGTTADDIAPETEVPVIDGEKIVEAE 207

Query: 811  KPAGQEDAVDATKXXXXXXXXXXXXXXXXXXXXXYEKVLEEKRKALQGLKSEERKVGLDK 990
            K AGQEDA D  K                     YEKV+EEKRKAL  LK EERKV LDK
Sbjct: 208  KQAGQEDAGDTNKESTAAEPEEKEPEEKEITLEEYEKVMEEKRKALVALKQEERKVNLDK 267

Query: 991  DLAKMQLLSNKKSEEDIFVKLGSXXXXXXXXXXXXXXXXXSLSINEFLKPAEGERYQNPX 1170
            +L  MQLLSNKK++++IF+KLG+                 + SINEFLKPAEGE Y  P 
Sbjct: 268  ELQSMQLLSNKKNDDEIFIKLGA---EKDKKKEAVEKTKKTKSINEFLKPAEGESYYRP- 323

Query: 1171 XXXXXXXXXXXXXXXXXXXINDAVAPAIEDVGQFPSLGVK 1290
                               IN   AP+IEDVGQFPSL VK
Sbjct: 324  GGRGRGRGRGRGNGGGYGGINSVSAPSIEDVGQFPSLAVK 363


>ref|XP_002303373.1| predicted protein [Populus trichocarpa] gi|222840805|gb|EEE78352.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  221 bits (563), Expect = 4e-55
 Identities = 133/278 (47%), Positives = 155/278 (55%), Gaps = 3/278 (1%)
 Frame = +1

Query: 466  FNRDSADNENSYGTNNGFSGGYRPSDDGDVEKSSEXXXXXXXXXXXXXXXXXXXXXXDEE 645
            FNRDS +NE S+ T NGFSG  RPS+DG  E +                        D E
Sbjct: 90   FNRDSNNNETSF-TGNGFSGRSRPSEDG--EAAERRGYGAPRGGFRGSRRGGYSNGEDGE 146

Query: 646  GERPRRVFERRSGTGRGNEFKREGAGRGNWGTATDDATLEPEEPVIEGEKNVDSDKPAGQ 825
            GERPRR++ER SGTGRGNE KREG+GRGNWGT TD+   E E+PV++ EKNV ++K  G+
Sbjct: 147  GERPRRMYERHSGTGRGNEIKREGSGRGNWGTPTDEIAPETEDPVVDNEKNVITEKQQGE 206

Query: 826  EDAVDATKXXXXXXXXXXXXXXXXXXXXXYEKVLEEKRKALQGLKSEERKVGLDKDLAKM 1005
            EDA DA K                     YEKVLEEKRKAL  LK+EERKVGLDKDL  M
Sbjct: 207  EDAADANK-DTAEKPEEKEPEEKEMTLEEYEKVLEEKRKALLDLKTEERKVGLDKDLQCM 265

Query: 1006 QLLSNKKSEEDIFVKLGSXXXXXXXXXXXXXXXXXSLSINEFLKPAEGERYQNP---XXX 1176
            Q LS+KKS ++IF+KLGS                 ++SINEFLKPAEGER  N       
Sbjct: 266  QQLSSKKSNDEIFIKLGSEKDKRKDAADKEDRAKKAVSINEFLKPAEGERSYNSGRGGRG 325

Query: 1177 XXXXXXXXXXXXXXXXXINDAVAPAIEDVGQFPSLGVK 1290
                               D  AP+IED GQFPSLG K
Sbjct: 326  RGRGRGGYGSGSGYGSNARDVAAPSIEDPGQFPSLGGK 363


>gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana tabacum]
          Length = 299

 Score =  221 bits (563), Expect = 4e-55
 Identities = 130/280 (46%), Positives = 157/280 (56%), Gaps = 5/280 (1%)
 Frame = +1

Query: 466  FNRDSADNENSYGTNNGFSGGYRPSDDGDVEKSSEXXXXXXXXXXXXXXXXXXXXXXDE- 642
            FN++SAD+EN++G+NNGFSG YR  +DG+  K SE                       + 
Sbjct: 23   FNQESADDENAFGSNNGFSGRYRVQEDGESGKLSERRGGYGGPRGGFHGGRRGGFNNGDA 82

Query: 643  ---EGERPRRVFERRSGTGRGNEF-KREGAGRGNWGTATDDATLEPEEPVIEGEKNVDSD 810
               EGERPRRVF+RRSGTGRGNE+ KREG+GRGNWGT  DD   E E PV +GEK V+++
Sbjct: 83   AEGEGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGTPADDIAQETEVPVNDGEKIVEAE 142

Query: 811  KPAGQEDAVDATKXXXXXXXXXXXXXXXXXXXXXYEKVLEEKRKALQGLKSEERKVGLDK 990
            K AGQE+A D  K                     YEK++EEKRKAL  LK EERKV LDK
Sbjct: 143  KEAGQEEAEDTNKDSTAAEPEEKEPEEKEMTLEEYEKLMEEKRKALLALKPEERKVNLDK 202

Query: 991  DLAKMQLLSNKKSEEDIFVKLGSXXXXXXXXXXXXXXXXXSLSINEFLKPAEGERYQNPX 1170
            +L  MQLLSNKK++++IF+KLGS                 + SINEFLKPAEGE Y    
Sbjct: 203  ELESMQLLSNKKNDDEIFIKLGS---EKEKRKEAVEKARKTQSINEFLKPAEGENYSRRG 259

Query: 1171 XXXXXXXXXXXXXXXXXXXINDAVAPAIEDVGQFPSLGVK 1290
                                    AP+IEDVGQFPSL  K
Sbjct: 260  GRGRGPGRGRGGFGGGVGGNKSFSAPSIEDVGQFPSLVAK 299


>ref|XP_002272562.2| PREDICTED: uncharacterized protein LOC100259885 [Vitis vinifera]
          Length = 370

 Score =  221 bits (562), Expect = 5e-55
 Identities = 123/275 (44%), Positives = 154/275 (56%)
 Frame = +1

Query: 466  FNRDSADNENSYGTNNGFSGGYRPSDDGDVEKSSEXXXXXXXXXXXXXXXXXXXXXXDEE 645
            FNRD A+NENS+ +N G +GG    +DG+  K SE                        +
Sbjct: 88   FNRDYANNENSF-SNMGVAGGQGAPEDGEGGKPSERRNYGGPRPPFRGRRGGFSNGEAGD 146

Query: 646  GERPRRVFERRSGTGRGNEFKREGAGRGNWGTATDDATLEPEEPVIEGEKNVDSDKPAGQ 825
            G+RPRR FERRSGTGRGNE KREG+GRGNWGT TD+ +   EE V EGEKN+ ++KP G+
Sbjct: 147  GDRPRRAFERRSGTGRGNELKREGSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGE 206

Query: 826  EDAVDATKXXXXXXXXXXXXXXXXXXXXXYEKVLEEKRKALQGLKSEERKVGLDKDLAKM 1005
            ED  D  K                     YEKVLEE+RKALQ LK+EERKV +DK+   M
Sbjct: 207  EDVADGNKENPVNEPEEKEPEEKEMTLEEYEKVLEERRKALQTLKTEERKVDVDKEFKSM 266

Query: 1006 QLLSNKKSEEDIFVKLGSXXXXXXXXXXXXXXXXXSLSINEFLKPAEGERYQNPXXXXXX 1185
            Q LS+KK  +DIF+KLGS                 ++SINEFLKPAEGER+ +P      
Sbjct: 267  QQLSSKKGNDDIFIKLGSDKDKRKEAAEKEERAKKAVSINEFLKPAEGERFYSPGGRGRG 326

Query: 1186 XXXXXXXXXXXXXXINDAVAPAIEDVGQFPSLGVK 1290
                          +++  AP+IED GQFP+LG K
Sbjct: 327  RGRGSRGGYGGGNAMSNVAAPSIEDPGQFPTLGAK 361


>emb|CBI16673.3| unnamed protein product [Vitis vinifera]
          Length = 361

 Score =  221 bits (562), Expect = 5e-55
 Identities = 123/275 (44%), Positives = 154/275 (56%)
 Frame = +1

Query: 466  FNRDSADNENSYGTNNGFSGGYRPSDDGDVEKSSEXXXXXXXXXXXXXXXXXXXXXXDEE 645
            FNRD A+NENS+ +N G +GG    +DG+  K SE                        +
Sbjct: 88   FNRDYANNENSF-SNMGVAGGQGAPEDGEGGKPSERRNYGGPRPPFRGRRGGFSNGEAGD 146

Query: 646  GERPRRVFERRSGTGRGNEFKREGAGRGNWGTATDDATLEPEEPVIEGEKNVDSDKPAGQ 825
            G+RPRR FERRSGTGRGNE KREG+GRGNWGT TD+ +   EE V EGEKN+ ++KP G+
Sbjct: 147  GDRPRRAFERRSGTGRGNELKREGSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGE 206

Query: 826  EDAVDATKXXXXXXXXXXXXXXXXXXXXXYEKVLEEKRKALQGLKSEERKVGLDKDLAKM 1005
            ED  D  K                     YEKVLEE+RKALQ LK+EERKV +DK+   M
Sbjct: 207  EDVADGNKENPVNEPEEKEPEEKEMTLEEYEKVLEERRKALQTLKTEERKVDVDKEFKSM 266

Query: 1006 QLLSNKKSEEDIFVKLGSXXXXXXXXXXXXXXXXXSLSINEFLKPAEGERYQNPXXXXXX 1185
            Q LS+KK  +DIF+KLGS                 ++SINEFLKPAEGER+ +P      
Sbjct: 267  QQLSSKKGNDDIFIKLGSDKDKRKEAAEKEERAKKAVSINEFLKPAEGERFYSPGGRGRG 326

Query: 1186 XXXXXXXXXXXXXXINDAVAPAIEDVGQFPSLGVK 1290
                          +++  AP+IED GQFP+LG K
Sbjct: 327  RGRGSRGGYGGGNAMSNVAAPSIEDPGQFPTLGAK 361


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