BLASTX nr result

ID: Atractylodes22_contig00000996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000996
         (1545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   410   e-112
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...   400   e-109
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...   398   e-108
ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...   397   e-108
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...   369   1e-99

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
           [Vitis vinifera]
          Length = 2177

 Score =  410 bits (1054), Expect = e-112
 Identities = 222/292 (76%), Positives = 236/292 (80%)
 Frame = -1

Query: 909 AMLSVIQQQLGGQPLNIVSGAADEILAVLKNDTLKNPDKKADIEKLLNPIPNNVFDQLVS 730
           AMLSVIQQQLGGQPLNIVSGAADEILAVLKN+T+KNPDKK +IE+LLNPIPN++FDQLVS
Sbjct: 126 AMLSVIQQQLGGQPLNIVSGAADEILAVLKNETVKNPDKKKEIERLLNPIPNHIFDQLVS 185

Query: 729 IGRLITDFQXXXXXXXXXXXXXXGEDALDDDVGVAVXXXXXXXXXXXXXXXXXXXXXXXX 550
           IGRLITDFQ               +DALDDDVGVAV                        
Sbjct: 186 IGRLITDFQDGGDAAGPTAANG--DDALDDDVGVAVEFEENEDEEEESDLDMVQEDEEED 243

Query: 549 XXXXXXXDGNNAMQMGRGMDDDDLQEANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQS 370
                   G+ AMQMG G+DDDD+QEANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQ 
Sbjct: 244 DDVMEQN-GSGAMQMGGGIDDDDMQEANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQC 302

Query: 369 QKLAEEVLKILEEGDDREVETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEDQEQR 190
           QKLAEEVLKIL EGDDREVETKLLVHLQFDKFSLIK+LLRNRLKIVWCTRLARAEDQE+R
Sbjct: 303 QKLAEEVLKILAEGDDREVETKLLVHLQFDKFSLIKFLLRNRLKIVWCTRLARAEDQEER 362

Query: 189 KQIEEKMMGLGPDLAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG 34
           K+IEE+M G G DLAAILEQLHATRATAKERQK LEKSIREEARRLKDESGG
Sbjct: 363 KKIEEEMTGSGSDLAAILEQLHATRATAKERQKILEKSIREEARRLKDESGG 414



 Score =  160 bits (406), Expect = 6e-37
 Identities = 84/109 (77%), Positives = 88/109 (80%)
 Frame = -2

Query: 1361 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKSFGDRAY 1182
            MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPK+FGDRAY
Sbjct: 1    MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKTFGDRAY 60

Query: 1181 RGRPPELDXXXXXXXXXXXXXXXXXXXEAVNNRQSKRRRLQEESVLTST 1035
            RGRPPELD                   E V +RQSKRRR+QEESVL+ST
Sbjct: 61   RGRPPELD-EKLKKSKRKKEREPQNASEPVLSRQSKRRRIQEESVLSST 108


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
           [Cucumis sativus]
          Length = 2175

 Score =  400 bits (1029), Expect = e-109
 Identities = 215/292 (73%), Positives = 233/292 (79%)
 Frame = -1

Query: 909 AMLSVIQQQLGGQPLNIVSGAADEILAVLKNDTLKNPDKKADIEKLLNPIPNNVFDQLVS 730
           AMLSVIQQQLGGQPL+IVSGAADEILAVLKND+ KNPDKK +IEKLLNPIPNNVFDQLVS
Sbjct: 125 AMLSVIQQQLGGQPLSIVSGAADEILAVLKNDSFKNPDKKKEIEKLLNPIPNNVFDQLVS 184

Query: 729 IGRLITDFQXXXXXXXXXXXXXXGEDALDDDVGVAVXXXXXXXXXXXXXXXXXXXXXXXX 550
           IGRLITD+Q               + ALDDD+GVAV                        
Sbjct: 185 IGRLITDYQDGNDATGPATANG--DGALDDDIGVAVEFEENEEEEESDLDMVQEDEEDED 242

Query: 549 XXXXXXXDGNNAMQMGRGMDDDDLQEANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQS 370
                   G+ AMQM  G+DDDDLQE + GM LNVQDIDAYWLQRKISQAYEQQIDPQQ 
Sbjct: 243 DVAEPN--GSGAMQMDGGIDDDDLQENDGGMNLNVQDIDAYWLQRKISQAYEQQIDPQQC 300

Query: 369 QKLAEEVLKILEEGDDREVETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEDQEQR 190
           QKLAEEVLKIL EGDDRE+ETKLLVHLQF+KFSL+K+LLRNRLK+VWCTRLAR+EDQE+R
Sbjct: 301 QKLAEEVLKILAEGDDREIETKLLVHLQFEKFSLVKFLLRNRLKVVWCTRLARSEDQEER 360

Query: 189 KQIEEKMMGLGPDLAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG 34
           K+IEE+MM LGPDLAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG
Sbjct: 361 KKIEEEMMHLGPDLAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG 412



 Score =  161 bits (408), Expect = 4e-37
 Identities = 84/109 (77%), Positives = 86/109 (78%)
 Frame = -2

Query: 1361 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKSFGDRAY 1182
            MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKSFGDRAY
Sbjct: 1    MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKSFGDRAY 60

Query: 1181 RGRPPELDXXXXXXXXXXXXXXXXXXXEAVNNRQSKRRRLQEESVLTST 1035
            RGRPPELD                   +   +RQ KRRRLQEESVLTST
Sbjct: 61   RGRPPELDEKLKKSKRKKKELDPIAEPQP--SRQGKRRRLQEESVLTST 107


>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
           200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score =  398 bits (1023), Expect = e-108
 Identities = 214/292 (73%), Positives = 232/292 (79%)
 Frame = -1

Query: 909 AMLSVIQQQLGGQPLNIVSGAADEILAVLKNDTLKNPDKKADIEKLLNPIPNNVFDQLVS 730
           AMLSVIQQQLGGQPL+IVSGAADEILAVLKND+ KNPDKK +IEKLLNPIPNNVFDQLVS
Sbjct: 125 AMLSVIQQQLGGQPLSIVSGAADEILAVLKNDSFKNPDKKKEIEKLLNPIPNNVFDQLVS 184

Query: 729 IGRLITDFQXXXXXXXXXXXXXXGEDALDDDVGVAVXXXXXXXXXXXXXXXXXXXXXXXX 550
           IGRLITD+Q               + ALDDD+GVAV                        
Sbjct: 185 IGRLITDYQDGNDATGPATANG--DGALDDDIGVAVEFEENEEEEESDLDMVQEDEEDED 242

Query: 549 XXXXXXXDGNNAMQMGRGMDDDDLQEANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQS 370
                   G+ AMQM  G+DDDDLQE + GM LNVQDIDAYWLQRKISQAYEQQIDPQQ 
Sbjct: 243 DVAEPN--GSGAMQMDGGIDDDDLQENDGGMNLNVQDIDAYWLQRKISQAYEQQIDPQQC 300

Query: 369 QKLAEEVLKILEEGDDREVETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEDQEQR 190
           QKLAEEVLKIL EGDDRE+ETKLLVHLQF+KFSL+K+LLRNRLK+VWCTRLAR+EDQE+R
Sbjct: 301 QKLAEEVLKILAEGDDREIETKLLVHLQFEKFSLVKFLLRNRLKVVWCTRLARSEDQEER 360

Query: 189 KQIEEKMMGLGPDLAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG 34
            +IEE+MM LGPDLAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG
Sbjct: 361 XKIEEEMMHLGPDLAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG 412



 Score =  161 bits (408), Expect = 4e-37
 Identities = 84/109 (77%), Positives = 86/109 (78%)
 Frame = -2

Query: 1361 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKSFGDRAY 1182
            MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKSFGDRAY
Sbjct: 1    MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKSFGDRAY 60

Query: 1181 RGRPPELDXXXXXXXXXXXXXXXXXXXEAVNNRQSKRRRLQEESVLTST 1035
            RGRPPELD                   +   +RQ KRRRLQEESVLTST
Sbjct: 61   RGRPPELDEKLKKSKRKKKELDPIAEPQP--SRQGKRRRLQEESVLTST 107


>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
           predicted protein [Populus trichocarpa]
          Length = 2157

 Score =  397 bits (1020), Expect = e-108
 Identities = 211/292 (72%), Positives = 232/292 (79%)
 Frame = -1

Query: 909 AMLSVIQQQLGGQPLNIVSGAADEILAVLKNDTLKNPDKKADIEKLLNPIPNNVFDQLVS 730
           AMLSVIQQQLGGQPLNIVS AADEILAVLKN++++  DK+ +IEKLLNPIPNN+F+Q+VS
Sbjct: 125 AMLSVIQQQLGGQPLNIVSAAADEILAVLKNESVRTQDKRKEIEKLLNPIPNNMFEQVVS 184

Query: 729 IGRLITDFQXXXXXXXXXXXXXXGEDALDDDVGVAVXXXXXXXXXXXXXXXXXXXXXXXX 550
           IGRLITD+Q               +DALDD VGVAV                        
Sbjct: 185 IGRLITDYQDAGDGAGASVANG--DDALDDGVGVAVEFDEDNEDEEEDSDLDMVPEEEEE 242

Query: 549 XXXXXXXDGNNAMQMGRGMDDDDLQEANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQS 370
                   G+ AMQMG G+DDD++ EANEG+ LNVQDIDAYWLQRKIS AYEQQIDPQQ 
Sbjct: 243 EDDVVEPGGSGAMQMGGGIDDDEMGEANEGLNLNVQDIDAYWLQRKISLAYEQQIDPQQC 302

Query: 369 QKLAEEVLKILEEGDDREVETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEDQEQR 190
           QKLAEEVLKIL EGDDREVETKLLVHLQFDKFSLIK+LLRNRLKIVWCTRLARA+DQE+R
Sbjct: 303 QKLAEEVLKILAEGDDREVETKLLVHLQFDKFSLIKFLLRNRLKIVWCTRLARAKDQEER 362

Query: 189 KQIEEKMMGLGPDLAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG 34
           KQIEE+MMGLGPDLA ILEQLHATRATAKERQKNLEKSIREEARRLKDE+GG
Sbjct: 363 KQIEEEMMGLGPDLAGILEQLHATRATAKERQKNLEKSIREEARRLKDETGG 414



 Score =  152 bits (384), Expect = 2e-34
 Identities = 80/109 (73%), Positives = 86/109 (78%)
 Frame = -2

Query: 1361 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKSFGDRAY 1182
            MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPE+L+G+IDP+SFGDRAY
Sbjct: 1    MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPETLWGRIDPRSFGDRAY 60

Query: 1181 RGRPPELDXXXXXXXXXXXXXXXXXXXEAVNNRQSKRRRLQEESVLTST 1035
            RGRP ELD                   EA   RQ+KRRRL+EESVLTST
Sbjct: 61   RGRPAELD--EKINKAKRKKKERDAVSEAGPTRQAKRRRLREESVLTST 107


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
           [Glycine max]
          Length = 2183

 Score =  369 bits (947), Expect = 1e-99
 Identities = 203/292 (69%), Positives = 225/292 (77%)
 Frame = -1

Query: 909 AMLSVIQQQLGGQPLNIVSGAADEILAVLKNDTLKNPDKKADIEKLLNPIPNNVFDQLVS 730
           AMLSVIQ QLGGQPL+IVS AADEILAVLKNDT+KNPDKK DIEKLLNPIP +VFDQLVS
Sbjct: 127 AMLSVIQNQLGGQPLSIVSAAADEILAVLKNDTVKNPDKKKDIEKLLNPIPGHVFDQLVS 186

Query: 729 IGRLITDFQXXXXXXXXXXXXXXGEDALDDDVGVAVXXXXXXXXXXXXXXXXXXXXXXXX 550
           IG+LITDFQ               E+ LDDDVGVAV                        
Sbjct: 187 IGKLITDFQEVVDVPNGSSAMDG-EEGLDDDVGVAVEFEENEDDDEESDLDIVQDEEEDD 245

Query: 549 XXXXXXXDGNNAMQMGRGMDDDDLQEANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQS 370
                   G+ AMQMG G+DD+D++E NEGM LNVQDIDAYWLQRKISQA+EQQIDPQ  
Sbjct: 246 EDVAEPN-GSGAMQMG-GIDDEDMEEGNEGMGLNVQDIDAYWLQRKISQAFEQQIDPQHC 303

Query: 369 QKLAEEVLKILEEGDDREVETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEDQEQR 190
           QKLAEEVLKIL EGDDREVE KLL HL+FDKFSLIK+LLRNRLKIVWCTRLARA+DQE+R
Sbjct: 304 QKLAEEVLKILAEGDDREVENKLLFHLEFDKFSLIKFLLRNRLKIVWCTRLARAQDQEER 363

Query: 189 KQIEEKMMGLGPDLAAILEQLHATRATAKERQKNLEKSIREEARRLKDESGG 34
           ++IEE+M   G +L  ILEQLHATRA+AKERQKNLEKSIREEARRLKD++GG
Sbjct: 364 EKIEEEMK--GTELQPILEQLHATRASAKERQKNLEKSIREEARRLKDDTGG 413



 Score =  150 bits (380), Expect = 7e-34
 Identities = 76/109 (69%), Positives = 83/109 (76%)
 Frame = -2

Query: 1361 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKSFGDRAY 1182
            MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL+GKIDPKSFGDRAY
Sbjct: 1    MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKSFGDRAY 60

Query: 1181 RGRPPELDXXXXXXXXXXXXXXXXXXXEAVNNRQSKRRRLQEESVLTST 1035
            RGRPPELD                   +      SKRRR+Q +SVL+++
Sbjct: 61   RGRPPELDEKLEKAKNKKKKKDRDAAADDATAVPSKRRRVQHDSVLSTS 109


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