BLASTX nr result

ID: Atractylodes22_contig00000969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000969
         (2238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148659.1| PREDICTED: photosystem I reaction center sub...   223   2e-55
ref|XP_004163047.1| PREDICTED: photosystem I reaction center sub...   221   8e-55
ref|XP_003631913.1| PREDICTED: photosystem I reaction center sub...   220   1e-54
ref|XP_003602547.1| Photosystem I reaction center subunit N [Med...   216   2e-53
gb|ACZ72945.1| photosystem I reaction center subunit [Nicotiana ...   213   1e-52

>ref|XP_004148659.1| PREDICTED: photosystem I reaction center subunit N,
            chloroplastic-like [Cucumis sativus]
          Length = 171

 Score =  223 bits (567), Expect = 2e-55
 Identities = 115/173 (66%), Positives = 130/173 (75%), Gaps = 4/173 (2%)
 Frame = -3

Query: 2110 MATMNSSVLACNYAVSGGVASPDFNSK----PSSVAPATVSYKLPVIRAKQTVRSSSHSN 1943
            MATMNSSVLACNYA+SG   S D NSK    PS  +P  V YKLP IRA+QT +     N
Sbjct: 1    MATMNSSVLACNYAISGA-GSADLNSKLTAAPSVASPGVVGYKLPAIRAQQT-KVPEAKN 58

Query: 1942 DQSQQGRRXXXXXXXXXXXXXATSSANAGVIDEYLEKSKANKELNDQKRLATSGANFARA 1763
            D  +                 + SSANAGVI++YLEKSKANKELND+KRLATSGANFARA
Sbjct: 59   DGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARA 118

Query: 1762 YTVQFGTCTFPYNFTGCQDLAKQKKVPFLSEDLELECKGKDKFKCGSNVFWKW 1604
            YTV+FGTC FP NFTGCQDLAKQKKVPF+++DLELEC+GKDK+KCGSNVFWKW
Sbjct: 119  YTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW 171


>ref|XP_004163047.1| PREDICTED: photosystem I reaction center subunit N,
            chloroplastic-like [Cucumis sativus]
          Length = 171

 Score =  221 bits (562), Expect = 8e-55
 Identities = 114/173 (65%), Positives = 129/173 (74%), Gaps = 4/173 (2%)
 Frame = -3

Query: 2110 MATMNSSVLACNYAVSGGVASPDFNSK----PSSVAPATVSYKLPVIRAKQTVRSSSHSN 1943
            MATMNSSVLACNYA+SG   S D NSK    PS  +P  V YKLP IRA+Q  +     N
Sbjct: 1    MATMNSSVLACNYAISGA-GSADLNSKLTAAPSVASPGVVGYKLPAIRAQQA-KVPEAKN 58

Query: 1942 DQSQQGRRXXXXXXXXXXXXXATSSANAGVIDEYLEKSKANKELNDQKRLATSGANFARA 1763
            D  +                 + SSANAGVI++YLEKSKANKELND+KRLATSGANFARA
Sbjct: 59   DGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARA 118

Query: 1762 YTVQFGTCTFPYNFTGCQDLAKQKKVPFLSEDLELECKGKDKFKCGSNVFWKW 1604
            YTV+FGTC FP NFTGCQDLAKQKKVPF+++DLELEC+GKDK+KCGSNVFWKW
Sbjct: 119  YTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW 171


>ref|XP_003631913.1| PREDICTED: photosystem I reaction center subunit N, chloroplastic
            [Vitis vinifera]
          Length = 173

 Score =  220 bits (561), Expect = 1e-54
 Identities = 118/175 (67%), Positives = 134/175 (76%), Gaps = 6/175 (3%)
 Frame = -3

Query: 2110 MATMNSSVLACNYAVSGGVASPDFNSK----PSSVAPATVSYKLPVIRAKQTVRSSSHSN 1943
            MA++NSSVLACNYA+SG  A P+ NSK    PS+ +PA    KLP IRA+Q  R S    
Sbjct: 1    MASVNSSVLACNYAISGAGA-PELNSKLVSMPSAASPAVAGLKLPAIRAQQA-RVSDSKK 58

Query: 1942 DQSQQGRRXXXXXXXXXXXXXA--TSSANAGVIDEYLEKSKANKELNDQKRLATSGANFA 1769
              + +GRR             A  +SSANAGVID+YLEKSKANKELND+KRLATSGANFA
Sbjct: 59   WGAGEGRRAALVYLAATLFTTAAASSSANAGVIDDYLEKSKANKELNDKKRLATSGANFA 118

Query: 1768 RAYTVQFGTCTFPYNFTGCQDLAKQKKVPFLSEDLELECKGKDKFKCGSNVFWKW 1604
            RAYTVQFGTC FP NFTGCQDLAK+KKVPFLSEDLELEC+G+DK+KCGSNVFWKW
Sbjct: 119  RAYTVQFGTCKFPENFTGCQDLAKKKKVPFLSEDLELECEGRDKYKCGSNVFWKW 173


>ref|XP_003602547.1| Photosystem I reaction center subunit N [Medicago truncatula]
            gi|355491595|gb|AES72798.1| Photosystem I reaction center
            subunit N [Medicago truncatula]
            gi|388492560|gb|AFK34346.1| unknown [Medicago truncatula]
          Length = 172

 Score =  216 bits (551), Expect = 2e-53
 Identities = 112/173 (64%), Positives = 128/173 (73%), Gaps = 4/173 (2%)
 Frame = -3

Query: 2110 MATMNSSVLACNYAVSGGVASPDFNSKPSSVAPATVSYKLPVIRAKQTVRSSSHSNDQSQ 1931
            MA MNSSVLAC+YA+SG   +    S PS+ +P     KLP+I+A+Q VR       ++ 
Sbjct: 1    MAAMNSSVLACSYAISGSELNAKLISVPSAASPGVSGIKLPLIKAQQ-VRIPEAKESRAS 59

Query: 1930 QGRRXXXXXXXXXXXXXATS----SANAGVIDEYLEKSKANKELNDQKRLATSGANFARA 1763
             GRR             A S    SANAGVI+EYLEKSKANKELND+KRLATSGANFARA
Sbjct: 60   DGRRNALALLAATLFTTAVSASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARA 119

Query: 1762 YTVQFGTCTFPYNFTGCQDLAKQKKVPFLSEDLELECKGKDKFKCGSNVFWKW 1604
            YTVQFGTC FP NFTGCQDLAKQKKVPF++EDLELEC+GKDK+KCGSNVFWKW
Sbjct: 120  YTVQFGTCKFPENFTGCQDLAKQKKVPFITEDLELECEGKDKYKCGSNVFWKW 172


>gb|ACZ72945.1| photosystem I reaction center subunit [Nicotiana tabacum]
          Length = 168

 Score =  213 bits (543), Expect = 1e-52
 Identities = 114/171 (66%), Positives = 134/171 (78%), Gaps = 2/171 (1%)
 Frame = -3

Query: 2110 MATMNSSVLACNYAVSGGVASPDFNSKPSSVAPATVSYKLPVIRAKQTVRSSSHSNDQSQ 1931
            MA MNSSVLAC+YAVSG + + +  SK +S+A  +V  K PVI+A+Q+    S +N ++Q
Sbjct: 1    MAAMNSSVLACSYAVSG-IGASELTSKHASIASQSVQ-KWPVIKAQQSKVLDSEAN-KNQ 57

Query: 1930 QGRRXXXXXXXXXXXXXATS--SANAGVIDEYLEKSKANKELNDQKRLATSGANFARAYT 1757
             GRR             A+S  SANAGVID+YLEKSKANKELND+KRLATSGANFARAYT
Sbjct: 58   AGRRIALLGLAAALFTAASSNSSANAGVIDDYLEKSKANKELNDKKRLATSGANFARAYT 117

Query: 1756 VQFGTCTFPYNFTGCQDLAKQKKVPFLSEDLELECKGKDKFKCGSNVFWKW 1604
            VQFGTC FP NFTGCQDLAKQKKVPF+S+DL LEC+GKDK+KCGSNVFWKW
Sbjct: 118  VQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 168


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