BLASTX nr result

ID: Atractylodes22_contig00000957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000957
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta]       531   e-149
sp|P27494.1|CB23_TOBAC RecName: Full=Chlorophyll a-b binding pro...   519   e-145
gb|AFO67217.1| putative chlorophyll a/b binding protein [Aralia ...   518   e-145
dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]       517   e-144
emb|CAA74179.1| chlorophyll a/b-binding protein [Beta vulgaris s...   516   e-144

>gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta]
          Length = 265

 Score =  531 bits (1368), Expect = e-149
 Identities = 257/265 (96%), Positives = 261/265 (98%)
 Frame = -2

Query: 959 MATSAIQQSAFAGQQALKPQNDLVRKTGSFNGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 780
           MATSAIQQSAFAG  ALKPQN+LV+KTGSF GGRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGSAALKPQNELVKKTGSFTGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 779 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 600
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LSK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLSK 120

Query: 599 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGP 420
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGP 180

Query: 419 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDKIYPGG+FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 239 NLSDHLSDPVANNAWAYATNFVPGK 165
           NL DHLSDPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHLSDPVANNAWAYATNFVPGK 265


>sp|P27494.1|CB23_TOBAC RecName: Full=Chlorophyll a-b binding protein 36, chloroplastic;
           AltName: Full=LHCII type I CAB-36; Short=LHCP; Flags:
           Precursor gi|19827|emb|CAA41188.1| chlorophyll a/b
           binding protein [Nicotiana tabacum]
          Length = 265

 Score =  519 bits (1336), Expect = e-145
 Identities = 250/265 (94%), Positives = 258/265 (97%)
 Frame = -2

Query: 959 MATSAIQQSAFAGQQALKPQNDLVRKTGSFNGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 780
           MATSAI+QSAFAGQ ALK QN+LVRK GSFNGGR TMRRTVKSAPQSIWYG DRPKYLGP
Sbjct: 1   MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGP 60

Query: 779 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 600
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+LSK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 599 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGP 420
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILA+WASQVVLMGLIEGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGP 180

Query: 419 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 239 NLSDHLSDPVANNAWAYATNFVPGK 165
           NL DH++DPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265


>gb|AFO67217.1| putative chlorophyll a/b binding protein [Aralia elata]
          Length = 265

 Score =  518 bits (1335), Expect = e-145
 Identities = 248/265 (93%), Positives = 257/265 (96%)
 Frame = -2

Query: 959 MATSAIQQSAFAGQQALKPQNDLVRKTGSFNGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 780
           MATSAIQQSAFAGQ ALKPQN+LVRK GSF GG  TMRRTVKSAP+SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKPQNELVRKVGSFGGGHITMRRTVKSAPESIWYGPDRPKYLGP 60

Query: 779 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 600
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 599 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGP 420
           NGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIWASQVVLMG +EGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGP 180

Query: 419 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LG GLDKIYPGG+FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGWGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 239 NLSDHLSDPVANNAWAYATNFVPGK 165
           NL DHL+DPVANNAWAYATNFVPGK
Sbjct: 241 NLYDHLADPVANNAWAYATNFVPGK 265


>dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]
          Length = 265

 Score =  517 bits (1331), Expect = e-144
 Identities = 246/265 (92%), Positives = 258/265 (97%)
 Frame = -2

Query: 959 MATSAIQQSAFAGQQALKPQNDLVRKTGSFNGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 780
           MATSAIQ+SAFAGQ ALKPQN+LVRK GS  GGR TMRRTV+SAP+SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQRSAFAGQTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGP 60

Query: 779 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 600
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAR 120

Query: 599 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGP 420
           NGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIWASQVVLMG +EGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGP 180

Query: 419 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDKIYPGG+FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 239 NLSDHLSDPVANNAWAYATNFVPGK 165
           NL DHL+DPVANNAWAYATNFVPGK
Sbjct: 241 NLYDHLADPVANNAWAYATNFVPGK 265


>emb|CAA74179.1| chlorophyll a/b-binding protein [Beta vulgaris subsp. vulgaris]
          Length = 264

 Score =  516 bits (1329), Expect = e-144
 Identities = 251/265 (94%), Positives = 257/265 (96%)
 Frame = -2

Query: 959 MATSAIQQSAFAGQQALKPQNDLVRKTGSFNGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 780
           MATS IQQSAFAGQ  LKPQN+LVRK G  NGGR +MRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSTIQQSAFAGQTILKPQNELVRKFGG-NGGRASMRRTVKSAPQSIWYGPDRPKYLGP 59

Query: 779 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 600
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LSK
Sbjct: 60  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK 119

Query: 599 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGP 420
           NGVKFGEAVWFKAGSQIF EGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGP
Sbjct: 120 NGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGP 179

Query: 419 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDK+YPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 180 LGEGLDKLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 239

Query: 239 NLSDHLSDPVANNAWAYATNFVPGK 165
           NLSDHL+DPVANNAWA+ATNFVPGK
Sbjct: 240 NLSDHLADPVANNAWAFATNFVPGK 264


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