BLASTX nr result

ID: Atractylodes22_contig00000952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000952
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR23806.1| initiation factor eIF4A-15 [Helianthus annuus]          77   1e-12
ref|XP_003597562.1| Eukaryotic initiation factor 4A [Medicago tr...    76   3e-12
ref|XP_002888890.1| predicted protein [Arabidopsis lyrata subsp....    74   1e-11
ref|NP_175829.1| translation initiation factor 4A-2 [Arabidopsis...    74   2e-11
ref|NP_001185220.1| translation initiation factor 4A-2 [Arabidop...    74   2e-11

>gb|AAR23806.1| initiation factor eIF4A-15 [Helianthus annuus]
          Length = 413

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = +1

Query: 1   GRKGVAINFVTLEDEKMLADIQKFYNVIVEELPSNVADLI 120
           GRKGVAINFVTL+DEKML DIQKFYNV+VEELPSNVADLI
Sbjct: 374 GRKGVAINFVTLDDEKMLGDIQKFYNVVVEELPSNVADLI 413


>ref|XP_003597562.1| Eukaryotic initiation factor 4A [Medicago truncatula]
           gi|355486610|gb|AES67813.1| Eukaryotic initiation factor
           4A [Medicago truncatula]
          Length = 413

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = +1

Query: 1   GRKGVAINFVTLEDEKMLADIQKFYNVIVEELPSNVADLI 120
           GRKGVAINFVTLED +MLADIQKFYNVIVEELPSNVADL+
Sbjct: 374 GRKGVAINFVTLEDARMLADIQKFYNVIVEELPSNVADLL 413


>ref|XP_002888890.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334731|gb|EFH65149.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = +1

Query: 1   GRKGVAINFVTLEDEKMLADIQKFYNVIVEELPSNVADLI 120
           GRKGVAINF+T EDE+MLADIQ+FYNV+VEELPSNVADL+
Sbjct: 375 GRKGVAINFMTTEDERMLADIQRFYNVVVEELPSNVADLL 414


>ref|NP_175829.1| translation initiation factor 4A-2 [Arabidopsis thaliana]
           gi|1170505|sp|P41377.1|IF4A2_ARATH RecName:
           Full=Eukaryotic initiation factor 4A-2; Short=eIF-4A-2;
           AltName: Full=ATP-dependent RNA helicase eIF4A-2;
           AltName: Full=DEAD-box ATP-dependent RNA helicase 19
           gi|4585969|gb|AAD25605.1|AC005287_7 Eukaryotic
           Initiation Factor 4A-2 [Arabidopsis thaliana]
           gi|14423372|gb|AAK62368.1|AF386923_1 Eukaryotic
           Initiation Factor 4A-2 [Arabidopsis thaliana]
           gi|16226681|gb|AAL16231.1|AF428462_1 At1g54270/F20D21_52
           [Arabidopsis thaliana] gi|16556|emb|CAA46189.1|
           eukaryotic translation initiation factor 4A-2
           [Arabidopsis thaliana] gi|21593545|gb|AAM65512.1|
           eukaryotic translation initiation factor 4A, putative
           [Arabidopsis thaliana] gi|30725682|gb|AAP37863.1|
           At1g54270 [Arabidopsis thaliana]
           gi|110740791|dbj|BAE98493.1| Eukaryotic Initiation
           Factor 4A-2 [Arabidopsis thaliana]
           gi|332194952|gb|AEE33073.1| translation initiation
           factor 4A-2 [Arabidopsis thaliana]
          Length = 412

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = +1

Query: 1   GRKGVAINFVTLEDEKMLADIQKFYNVIVEELPSNVADLI 120
           GRKGVAINFVTL+D++ML DIQKFYNV+VEELPSNVADL+
Sbjct: 373 GRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 412


>ref|NP_001185220.1| translation initiation factor 4A-2 [Arabidopsis thaliana]
           gi|332194953|gb|AEE33074.1| translation initiation
           factor 4A-2 [Arabidopsis thaliana]
          Length = 407

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = +1

Query: 1   GRKGVAINFVTLEDEKMLADIQKFYNVIVEELPSNVADLI 120
           GRKGVAINFVTL+D++ML DIQKFYNV+VEELPSNVADL+
Sbjct: 368 GRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 407


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