BLASTX nr result

ID: Atractylodes22_contig00000934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000934
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    53   1e-22
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    52   7e-22
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    52   2e-20
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    49   2e-19
gb|ACL13172.1| S-locus F-box protein 9 [Prunus armeniaca]              56   2e-18

>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 53.1 bits (126), Expect(3) = 1e-22
 Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
 Frame = +2

Query: 392 LSRSPQLELANFINFPV-NEDSHFEVVGSVNGLLCLSEQQSNEDFVIQIRNLSLSAVLTL 568
           L  +P   + + +N+PV N+  H  +VGS NGLLC + +       + + N S+      
Sbjct: 123 LFNNPSSTVCDDLNYPVKNKFRHDGIVGSCNGLLCFAIKGD----CVLLWNPSIRVSKKS 178

Query: 569 PPYNISLRSFDSTFCHFRFGYDPKTDDYKVIKVLCILRPPRDPLASLLSFGTNLSVAKEW 748
           PP   + R     F  F  GYD   +DYKV+ V C      DP    +            
Sbjct: 179 PPLGNNWRP--GCFTAFGLGYDHVNEDYKVVAVFC------DPSEYFIE----------- 219

Query: 749 VEVEVYSMRKGSWESITQRFP 811
            +V+VYSM   SW  I Q FP
Sbjct: 220 CKVKVYSMATNSWRKI-QDFP 239



 Score = 51.2 bits (121), Expect(3) = 1e-22
 Identities = 22/46 (47%), Positives = 32/46 (69%)
 Frame = +3

Query: 201 LPDDVLLKIFVRLPAKPLAQMRCVSKPWNALLSQPSFIKFHLQTTT 338
           LPD+++++I  RLP K L Q RCV K W +L+S P F+K HL  ++
Sbjct: 49  LPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSS 94



 Score = 49.7 bits (117), Expect(3) = 1e-22
 Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
 Frame = +3

Query: 903  IVAFELGKETFSEICLPDSILDSNVRCEIIGLGVLGGKLCVMSSFRNYNFEVWVM----- 1067
            IV+ +L KET+ E+  PD   +    C    LGVL G LC+   ++  +F VW+M     
Sbjct: 272  IVSLDLHKETYREVLPPDYEKED---CSTPSLGVLQGCLCMNYDYKKTHFVVWMMKDYGV 328

Query: 1068 NESWVKHHVF------SQFSNSGIIRPFGFTLNNEFLFNAHGRLFLYDP 1196
             ESWVK            FS SG   P+  + N + L      L LYDP
Sbjct: 329  RESWVKLVSIPYVPNPEDFSYSG---PYYISENGKVLLMFEFDLILYDP 374


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 51.6 bits (122), Expect(3) = 7e-22
 Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
 Frame = +3

Query: 903  IVAFELGKETFSEICLPDSILDSNVRCEIIGLGVLGGKLCVMSSFRNYNFEVWVM----- 1067
            IV+ +L KET+ E+  PD   +    C   GLGVL G LC+   ++  +F VW+M     
Sbjct: 271  IVSLDLHKETYREVLPPDYEKED---CSTPGLGVLQGCLCMNYDYKKTHFVVWMMKDYGA 327

Query: 1068 NESWVKHHVF------SQFSNSGIIRPFGFTLNNEFLFNAHGRLFLYDP 1196
             ESWVK            FS SG   P+  + N E L      L LY+P
Sbjct: 328  RESWVKLVSIPYVPNPENFSYSG---PYYISENGEVLLMFEFDLILYNP 373



 Score = 50.8 bits (120), Expect(3) = 7e-22
 Identities = 42/129 (32%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
 Frame = +2

Query: 428 INFPV-NEDSHFEVVGSVNGLLCLSEQQSNEDFVIQIRNLSLSAVLTLPPYNISLRSFDS 604
           +N+PV N+  H  +VGS NGLLC + +       + + N S+      PP   + R    
Sbjct: 134 LNYPVKNKFRHDGIVGSCNGLLCFAIKGD----CVLLWNPSIRVSKKSPPLGNNWRP--G 187

Query: 605 TFCHFRFGYDPKTDDYKVIKVLCILRPPRDPLASLLSFGTNLSVAKEWVEVEVYSMRKGS 784
            F  F  GYD   +DYKV+ V C      DP    +             +V+VYSM   S
Sbjct: 188 CFTAFGLGYDHVNEDYKVVAVFC------DPSEYFIE-----------CKVKVYSMATNS 230

Query: 785 WESITQRFP 811
           W  I Q FP
Sbjct: 231 WRKI-QDFP 238



 Score = 48.9 bits (115), Expect(3) = 7e-22
 Identities = 21/46 (45%), Positives = 31/46 (67%)
 Frame = +3

Query: 201 LPDDVLLKIFVRLPAKPLAQMRCVSKPWNALLSQPSFIKFHLQTTT 338
           LPD+++++I  RLP K L Q RCV K W +L+  P F+K HL  ++
Sbjct: 49  LPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHLHLSS 94


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 366

 Score = 51.6 bits (122), Expect(3) = 2e-20
 Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
 Frame = +3

Query: 900  TIVAFELGKETFSEICLPDSILDSNVRCEIIGLGVLGGKLCVMSSFRNYNFEVWVM---- 1067
            TIV+ +L KET+ E+  PD        C    L VL G LC+   ++  +F VW+M    
Sbjct: 231  TIVSLDLEKETYREVLPPDY---EKEECSTPSLSVLKGCLCMNYDYKKTDFVVWLMKDYG 287

Query: 1068 -NESWVKHHVF------SQFSNSGIIRPFGFTLNNEFLFNAHGRLFLYDP 1196
              ESW+K            FS SG   P+  + N E L      L LYDP
Sbjct: 288  VRESWIKLLTIPYLPNPEDFSYSG---PYCISENGEVLLMFEFDLILYDP 334



 Score = 48.1 bits (113), Expect(3) = 2e-20
 Identities = 44/133 (33%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
 Frame = +2

Query: 428 INFPV-NEDSHFEVVGSVNGLLCLSEQQSNEDFVIQIRNLSLSAVLTLPPYNISLRSFDS 604
           +N+PV N+  H  +VGS NGLLC + +       + + N S+      PP   + R    
Sbjct: 94  LNYPVKNKFRHDGIVGSCNGLLCFAIKGD----CVLLWNPSIRVSKKSPPLGNNWRP--G 147

Query: 605 TFCHFRFGYDPKTDDYKVIKVLCILRPPRDPLASLLSFGTNLSVAKEWVEVEVYSMRKGS 784
            F  F  GYD   DDYKV+ V C      DP           S +K    V+VYSM   +
Sbjct: 148 CFTCFGLGYDHVNDDYKVVAVFC------DP-------NEFFSESK----VKVYSMATNT 190

Query: 785 WESITQRFPSHVT 823
           W  I   FP  V+
Sbjct: 191 WRKI-HDFPHGVS 202



 Score = 47.0 bits (110), Expect(3) = 2e-20
 Identities = 20/46 (43%), Positives = 31/46 (67%)
 Frame = +3

Query: 201 LPDDVLLKIFVRLPAKPLAQMRCVSKPWNALLSQPSFIKFHLQTTT 338
           LP++++L+I ++LP K L + RCV K W  ++S P FIK  L  +T
Sbjct: 8   LPEELILEILIKLPIKSLLRFRCVCKSWLHIISNPYFIKKQLHFST 53


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 49.3 bits (116), Expect(3) = 2e-19
 Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
 Frame = +2

Query: 428 INFPVNEDSH-FEVVGSVNGLLCLSEQQSNEDFVIQIRNLSLSAVLTLPPYNISL-RSFD 601
           +N P+   +H  +V+GSVNGLLC+S    +    I + N S      +P   I L R F 
Sbjct: 85  LNHPLMCYNHGIKVLGSVNGLLCISNVVDD----IAVWNPSTRKHRVVPFLPIELKRYFG 140

Query: 602 STFCH---FRFGYDPKTDDYKVIKVLCILRPPRDPLASLLSFGTNLSVAKEWVEVEVYSM 772
           +  C    F FGYD   DDYK++++                FG     + E  EV+VYS+
Sbjct: 141 TKSCSVYVFGFGYDSVRDDYKLVRI--------------AQFGGGGKRSFE-SEVKVYSL 185

Query: 773 RKGSWESI 796
           RK SW  I
Sbjct: 186 RKQSWRRI 193



 Score = 48.1 bits (113), Expect(3) = 2e-19
 Identities = 22/43 (51%), Positives = 30/43 (69%)
 Frame = +3

Query: 201 LPDDVLLKIFVRLPAKPLAQMRCVSKPWNALLSQPSFIKFHLQ 329
           LP +++ +I  RLPAK L   R VSKPW AL+  P+F+K HL+
Sbjct: 4   LPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLK 46



 Score = 45.8 bits (107), Expect(3) = 2e-19
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
 Frame = +3

Query: 903  IVAFELGKETFSEICLPDSILDSNVRCEIIGLGVLGGKLCVMSSFRNYNFEVWVM----- 1067
            +VA +LG E + E+  P+   D N     I LGVL G LC +++F     +VW+M     
Sbjct: 230  VVALDLGVEDYREVLQPE-YKDKNF---YIDLGVLRGCLCFLANFLGERVDVWMMKEYGV 285

Query: 1068 NESWVKHHVFSQFSNSGIIR---PFGFTLNNEFLFNAHGRLFL 1187
             ESW K    +Q+   G +R   P  ++ + + +   H  L L
Sbjct: 286  KESWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDL 328


>gb|ACL13172.1| S-locus F-box protein 9 [Prunus armeniaca]
          Length = 352

 Score = 56.2 bits (134), Expect(3) = 2e-18
 Identities = 37/128 (28%), Positives = 66/128 (51%)
 Frame = +2

Query: 413 ELANFINFPVNEDSHFEVVGSVNGLLCLSEQQSNEDFVIQIRNLSLSAVLTLPPYNISLR 592
           +L + ++ P+   + + + GS NGL+C+S++  N D  I I N S+    T PP + ++ 
Sbjct: 85  KLCSKLSHPLGSTNRYGIYGSSNGLVCISDEILNFDSPIHIWNPSVKK-FTSPPMSTNI- 142

Query: 593 SFDSTFCHFRFGYDPKTDDYKVIKVLCILRPPRDPLASLLSFGTNLSVAKEWVEVEVYSM 772
           +   T+   +FG+ P  +DYKV++   ++R  +  LA                 VEVY++
Sbjct: 143 NVKFTYVALQFGFHPSLNDYKVVR---MMRTNKGALA-----------------VEVYTL 182

Query: 773 RKGSWESI 796
           R  SW+ I
Sbjct: 183 RTDSWKMI 190



 Score = 45.1 bits (105), Expect(3) = 2e-18
 Identities = 19/45 (42%), Positives = 26/45 (57%)
 Frame = +3

Query: 210 DVLLKIFVRLPAKPLAQMRCVSKPWNALLSQPSFIKFHLQTTTMK 344
           ++L+ I  RLPAK L +  C  K W+ L+S PSF+  HL     K
Sbjct: 1   EILIDILARLPAKSLVRFLCTCKSWSDLISSPSFVSTHLYRNVTK 45



 Score = 38.5 bits (88), Expect(3) = 2e-18
 Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
 Frame = +3

Query: 876  IDEKMEQKTIVAFELGKETFSEICLPDSILDSNVRCEIIGLGVLGGKLCVMSSFRNYNFE 1055
            I EK    +I++F+ G E F E   PDSI   +  C    + V   ++C++ SF +   E
Sbjct: 216  IIEKGPMFSIMSFDSGSEEFEEFIAPDSICSPSELC----IDVYKEQICLLFSFYSCEEE 271

Query: 1056 VWVMNESWVKHHVFSQFSNSGIIRPF----------GFTLNNEFL 1160
              V N+ WV      Q+     +RPF          G +++NE L
Sbjct: 272  GMVPNDLWVLQE--KQWKQ---LRPFIYPAGSYGTIGISIDNELL 311


Top