BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000889
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA74537.1| polyprotein [Navel orange infectious mottling vi...   168   4e-40
dbj|BAF56877.1| RNA-dependent RNA polymerase [Citrus mosaic sadw...   157   9e-37
dbj|BAF56879.1| RNA-dependent RNA polymerase [Citrus mosaic sadw...   157   9e-37
ref|NP_734025.1| RNA-dependent RNA polymerase [Satsuma dwarf virus]   152   3e-35
ref|NP_620566.1| polyprotein [Satsuma dwarf virus] gi|81979373|s...   152   3e-35

>dbj|BAA74537.1| polyprotein [Navel orange infectious mottling virus]
          Length = 872

 Score =  168 bits (426), Expect = 4e-40
 Identities = 85/88 (96%), Positives = 86/88 (97%)
 Frame = -3

Query: 266 PLKKISIEERLFYVKGGQDELAALELNMATALCEAFFHGREYFCFLEAEILKAVRKSGIS 87
           PLKKISIEERLFYVKGGQDELAALELNMATALCEAFFHG+EYF FLEAEILKAVRKS IS
Sbjct: 653 PLKKISIEERLFYVKGGQDELAALELNMATALCEAFFHGKEYFRFLEAEILKAVRKSRIS 712

Query: 86  LTKPLPTMESIRVWYLSQRTNTKVRSPS 3
           LTKPLPTMESIRVWYLSQRTNTKVRSPS
Sbjct: 713 LTKPLPTMESIRVWYLSQRTNTKVRSPS 740


>dbj|BAF56877.1| RNA-dependent RNA polymerase [Citrus mosaic sadwavirus]
           gi|145586897|dbj|BAF56878.1| RNA-dependent RNA
           polymerase [Citrus mosaic sadwavirus]
          Length = 319

 Score =  157 bits (397), Expect = 9e-37
 Identities = 77/88 (87%), Positives = 82/88 (93%)
 Frame = -3

Query: 266 PLKKISIEERLFYVKGGQDELAALELNMATALCEAFFHGREYFCFLEAEILKAVRKSGIS 87
           PLKKISIEERLFYVKGGQDELAALELN+ATALCEAFFHG+EYF  LE  I++AV KSGI 
Sbjct: 101 PLKKISIEERLFYVKGGQDELAALELNVATALCEAFFHGKEYFALLEKRIIEAVHKSGIR 160

Query: 86  LTKPLPTMESIRVWYLSQRTNTKVRSPS 3
           LTKPLPTMESIRVWYLSQR+NTKVRSPS
Sbjct: 161 LTKPLPTMESIRVWYLSQRSNTKVRSPS 188


>dbj|BAF56879.1| RNA-dependent RNA polymerase [Citrus mosaic sadwavirus]
          Length = 319

 Score =  157 bits (397), Expect = 9e-37
 Identities = 77/88 (87%), Positives = 82/88 (93%)
 Frame = -3

Query: 266 PLKKISIEERLFYVKGGQDELAALELNMATALCEAFFHGREYFCFLEAEILKAVRKSGIS 87
           PLKKISIEERLFYVKGGQDELAALELN+ATALCEAFFHG+EYF  LE  I++AV KSGI 
Sbjct: 101 PLKKISIEERLFYVKGGQDELAALELNVATALCEAFFHGKEYFALLEKRIIEAVHKSGIR 160

Query: 86  LTKPLPTMESIRVWYLSQRTNTKVRSPS 3
           LTKPLPTMESIRVWYLSQR+NTKVRSPS
Sbjct: 161 LTKPLPTMESIRVWYLSQRSNTKVRSPS 188


>ref|NP_734025.1| RNA-dependent RNA polymerase [Satsuma dwarf virus]
          Length = 682

 Score =  152 bits (384), Expect = 3e-35
 Identities = 69/88 (78%), Positives = 84/88 (95%)
 Frame = -3

Query: 266 PLKKISIEERLFYVKGGQDELAALELNMATALCEAFFHGREYFCFLEAEILKAVRKSGIS 87
           PLKKISIEERLFYV+GGQDE+AALELN+ATALCEAFFHG+EYF FLE +I++A+RKSG++
Sbjct: 464 PLKKISIEERLFYVRGGQDEIAALELNIATALCEAFFHGKEYFSFLEGKIIEAMRKSGVA 523

Query: 86  LTKPLPTMESIRVWYLSQRTNTKVRSPS 3
           L++PLPTMES+R WY+SQR NTK+RSPS
Sbjct: 524 LSRPLPTMESVRAWYMSQRGNTKIRSPS 551


>ref|NP_620566.1| polyprotein [Satsuma dwarf virus] gi|81979373|sp|Q9WAL8.1|POL1_SDVS5
            RecName: Full=RNA1 polyprotein; AltName: Full=P1;
            Contains: RecName: Full=Putative helicase; AltName:
            Full=Putative NTP-binding protein; Contains: RecName:
            Full=Probable picornain 3C-like protease; Short=3C-like
            protease; Contains: RecName: Full=Probable RNA-directed
            RNA polymerase gi|4589400|dbj|BAA76746.1| polyprotein
            [Satsuma dwarf virus]
          Length = 2081

 Score =  152 bits (384), Expect = 3e-35
 Identities = 69/88 (78%), Positives = 84/88 (95%)
 Frame = -3

Query: 266  PLKKISIEERLFYVKGGQDELAALELNMATALCEAFFHGREYFCFLEAEILKAVRKSGIS 87
            PLKKISIEERLFYV+GGQDE+AALELN+ATALCEAFFHG+EYF FLE +I++A+RKSG++
Sbjct: 1863 PLKKISIEERLFYVRGGQDEIAALELNIATALCEAFFHGKEYFSFLEGKIIEAMRKSGVA 1922

Query: 86   LTKPLPTMESIRVWYLSQRTNTKVRSPS 3
            L++PLPTMES+R WY+SQR NTK+RSPS
Sbjct: 1923 LSRPLPTMESVRAWYMSQRGNTKIRSPS 1950