BLASTX nr result
ID: Atractylodes22_contig00000880
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00000880
(1660 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|2... 473 0.0
ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putativ... 468 0.0
ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|2... 468 0.0
ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 464 0.0
ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 464 0.0
>ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|222847303|gb|EEE84850.1|
predicted protein [Populus trichocarpa]
Length = 791
Score = 473 bits (1217), Expect(2) = 0.0
Identities = 247/356 (69%), Positives = 275/356 (77%), Gaps = 6/356 (1%)
Frame = -3
Query: 1487 MAATATVTTSAPRYAPEDPTLPKPWKGLVDGKTGYLYYWNPETNVTQYERPSGSKGSAXX 1308
MAATAT ++ PRYAPEDPTLPKPW+GLVDGKTGYLY+WNPETNVTQYERP+ K +
Sbjct: 1 MAATATASSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPTLPKSVS-- 58
Query: 1307 XXXXXXXXXXXXXXXXXXXXPHGNGFIDDDRYGRSSNGGSKFSSGTRGHESTRSGSHPNG 1128
+ +DDRYGR++N GSK + TR S+ +
Sbjct: 59 ----SLPITSSVQVHQSSHRGYNPSVKEDDRYGRANNAGSKPDAVTRSISSSNQSARGAA 114
Query: 1127 IIAA-LPGGT----SVRPYXXXXXXXXSP-DAYRRRHEITVTGDNVPPPFTSFEDTGFPS 966
I + +P GT S R Y +AYRRRHEITVTGD VPPP TSFE TGFPS
Sbjct: 115 IQSENVPNGTANGLSARVYGSSAGGSGMSGEAYRRRHEITVTGDEVPPPLTSFETTGFPS 174
Query: 965 ELLREVLQAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRVHKNR 786
E+L+EVL AGFSAPTPIQAQSWP+ALQSRDIVA+AKTGSGKTLGYLIPGFIHLKR +
Sbjct: 175 EILKEVLNAGFSAPTPIQAQSWPIALQSRDIVAVAKTGSGKTLGYLIPGFIHLKRSCNDP 234
Query: 785 QMGPTVLVLSPTRELATQIQVEAVKFGKSSKILCTCLYGGAPKGPQLRELDRGTDIVVAT 606
++GPTVLVLSPTRELATQIQVEAVKFGKSS+ CTCLYGGAPKGPQL+ELDRG DIVVAT
Sbjct: 235 RLGPTVLVLSPTRELATQIQVEAVKFGKSSRFSCTCLYGGAPKGPQLKELDRGADIVVAT 294
Query: 605 PGRLNDILEMRRISLSQVTYLVLDEADRMLDMGFEPQIRKIVKEIPARRQTLMYTA 438
PGRLNDILEMRR+SLSQV+YLVLDEADRMLDMGFEPQIRKIVKE+PARRQTLMYTA
Sbjct: 295 PGRLNDILEMRRVSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTA 350
Score = 204 bits (520), Expect(2) = 0.0
Identities = 98/112 (87%), Positives = 106/112 (94%)
Frame = -1
Query: 337 QYIEVLAPMEKHRRLEQILRSQEPRSKVIIFCSTKKMCDQLGRNLTRQFSAAVIHGDKSQ 158
QY+E+LAP+EKHRRLEQILRSQE SK+IIFCSTKKMCDQL RNLTRQF AA IHGDKSQ
Sbjct: 386 QYVELLAPLEKHRRLEQILRSQESGSKIIIFCSTKKMCDQLSRNLTRQFGAAAIHGDKSQ 445
Query: 157 GERDYVLNQFRSGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 2
ERDYVL+QFR+GRSP+LVATDVAARGLDIKDIRVV+NYDFPTGVEDYVHRI
Sbjct: 446 SERDYVLSQFRTGRSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 497
>ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223539345|gb|EEF40936.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 781
Score = 468 bits (1203), Expect(2) = 0.0
Identities = 247/360 (68%), Positives = 275/360 (76%), Gaps = 10/360 (2%)
Frame = -3
Query: 1487 MAATATVTTSAPRYAPEDPTLPKPWKGLVDGKTGYLYYWNPETNVTQYERPSG----SKG 1320
MAATAT + PRYAPEDPTLPKPW+GLVDGKTGYLY+WNPETNVTQYERP SK
Sbjct: 1 MAATAT---AGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPIATALPSKS 57
Query: 1319 SAXXXXXXXXXXXXXXXXXXXXXXPHGNGFIDDDRYGRSSNGGSKFSSGTRGHESTRSGS 1140
S ++DRYGR + GSK +GT +++ + G
Sbjct: 58 SLVPISSSVQVQQSSRRGYSPVK--------EEDRYGRGNGSGSKPDAGTNFNQNAKGGG 109
Query: 1139 H-----PNGIIAALPGGTSVRPYXXXXXXXXS-PDAYRRRHEITVTGDNVPPPFTSFEDT 978
PNG A PGG S R + P+AYRRRHEI+VTGD+VPPP T+FE T
Sbjct: 110 FQSQNVPNGT-ANGPGGPSARGHGSSAGGSILSPEAYRRRHEISVTGDDVPPPLTTFEAT 168
Query: 977 GFPSELLREVLQAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRV 798
GFPSE+LREVL AGFS PTPIQAQSWP+ALQS+DIVAIAKTGSGKTLGYL+PGFIHLKR
Sbjct: 169 GFPSEILREVLSAGFSVPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPGFIHLKRC 228
Query: 797 HKNRQMGPTVLVLSPTRELATQIQVEAVKFGKSSKILCTCLYGGAPKGPQLRELDRGTDI 618
+ Q+GPTVLVLSPTRELATQIQ EAVKFG+SS+I CTCLYGGAPKGPQL+ELDRG DI
Sbjct: 229 RNDPQLGPTVLVLSPTRELATQIQDEAVKFGRSSRISCTCLYGGAPKGPQLKELDRGVDI 288
Query: 617 VVATPGRLNDILEMRRISLSQVTYLVLDEADRMLDMGFEPQIRKIVKEIPARRQTLMYTA 438
VVATPGRLNDILEMRRISLSQV+YLVLDEADRMLDMGFEPQIRKIVKE+P+RRQTLMYTA
Sbjct: 289 VVATPGRLNDILEMRRISLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPSRRQTLMYTA 348
Score = 206 bits (525), Expect(2) = 0.0
Identities = 101/112 (90%), Positives = 106/112 (94%)
Frame = -1
Query: 337 QYIEVLAPMEKHRRLEQILRSQEPRSKVIIFCSTKKMCDQLGRNLTRQFSAAVIHGDKSQ 158
QYIEVLAPMEKHRRLEQILRSQEP SK+IIFCSTKKMCDQL RNLTR F AA IHGDKSQ
Sbjct: 384 QYIEVLAPMEKHRRLEQILRSQEPGSKIIIFCSTKKMCDQLARNLTRTFGAAAIHGDKSQ 443
Query: 157 GERDYVLNQFRSGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 2
ERD+VL+QFR+GRSPVLVATDVAARGLDIKDIRVV+NYDFPTGVEDYVHRI
Sbjct: 444 SERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 495
>ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|222867004|gb|EEF04135.1|
predicted protein [Populus trichocarpa]
Length = 726
Score = 468 bits (1204), Expect(2) = 0.0
Identities = 244/351 (69%), Positives = 271/351 (77%), Gaps = 1/351 (0%)
Frame = -3
Query: 1487 MAATATVTTSAPRYAPEDPTLPKPWKGLVDGKTGYLYYWNPETNVTQYERPSGSKGSAXX 1308
M A AT +++ PRYAP+DPTLPKPW+GLVDGKTGYLY+WNPETNVTQYERPS S
Sbjct: 1 MTAAATTSSAGPRYAPDDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSTSA----- 55
Query: 1307 XXXXXXXXXXXXXXXXXXXXPHGNGFIDDDRYGRSSNGGSKFSSGTRGHESTRSGSHPNG 1128
G+ DDRYGR+ N SK + TR S+++ + PNG
Sbjct: 56 IPPKSSSSVPITPSVQVEQSSSHRGYSPDDRYGRAHNAESKADAVTR---SSQAWNVPNG 112
Query: 1127 IIAALPGGTSVRPYXXXXXXXXSP-DAYRRRHEITVTGDNVPPPFTSFEDTGFPSELLRE 951
G S R + +AYRRRHEITVTGD VPPP TSFE TGFPSE+L+E
Sbjct: 113 TA----NGISARGHGSSSGGSGLTGEAYRRRHEITVTGDEVPPPLTSFEATGFPSEILKE 168
Query: 950 VLQAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRVHKNRQMGPT 771
VL+AGFS+PTPIQAQSWPVALQSRDIVA+AKTGSGKTLGYLIPGFIHLKR + Q+GPT
Sbjct: 169 VLKAGFSSPTPIQAQSWPVALQSRDIVAVAKTGSGKTLGYLIPGFIHLKRCRNDPQLGPT 228
Query: 770 VLVLSPTRELATQIQVEAVKFGKSSKILCTCLYGGAPKGPQLRELDRGTDIVVATPGRLN 591
VLVLSPTRELATQIQ EAVKFGKSS+I CTCLYGGAPKGPQL+ELDRG DIVVATPGRLN
Sbjct: 229 VLVLSPTRELATQIQDEAVKFGKSSRISCTCLYGGAPKGPQLKELDRGADIVVATPGRLN 288
Query: 590 DILEMRRISLSQVTYLVLDEADRMLDMGFEPQIRKIVKEIPARRQTLMYTA 438
DILEMRR+SL+QV YLVLDEADRMLDMGFEPQIRKIVKE+PARRQTLMYTA
Sbjct: 289 DILEMRRVSLNQVKYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTA 339
Score = 204 bits (519), Expect(2) = 0.0
Identities = 98/112 (87%), Positives = 107/112 (95%)
Frame = -1
Query: 337 QYIEVLAPMEKHRRLEQILRSQEPRSKVIIFCSTKKMCDQLGRNLTRQFSAAVIHGDKSQ 158
Q++E+LAP+EKHRRLEQILRSQEP SK+IIFCSTKKMCDQL RNLTRQF AA IHGDKSQ
Sbjct: 375 QHVELLAPLEKHRRLEQILRSQEPGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQ 434
Query: 157 GERDYVLNQFRSGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 2
ERD+VL+QFR+GRSP+LVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI
Sbjct: 435 SERDHVLSQFRTGRSPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 486
>ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 1
[Vitis vinifera]
Length = 863
Score = 464 bits (1195), Expect(2) = 0.0
Identities = 248/357 (69%), Positives = 269/357 (75%), Gaps = 7/357 (1%)
Frame = -3
Query: 1487 MAATATVTTSAPRYAPEDPTLPKPWKGLVDGKTGYLYYWNPETNVTQYERP-----SGSK 1323
MAATAT PRYAPEDPTLPKPWKGLVDGKTGYLY+WNPETNVTQYERP S +
Sbjct: 1 MAATAT----GPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPERPGASSNA 56
Query: 1322 GSAXXXXXXXXXXXXXXXXXXXXXXPHGNGF-IDDDRYGRSSNGGSKFSSGTRGHESTRS 1146
A +G +DD+Y R+ N GT S
Sbjct: 57 SLAPPPKSSASISSSVQVQQSSQGQRRDHGLNEEDDKYNRARNLQQSARGGT-----VHS 111
Query: 1145 GSHPNGIIAALPGGTSVRPY-XXXXXXXXSPDAYRRRHEITVTGDNVPPPFTSFEDTGFP 969
PNGI+ A GG+SVR S ++YRRRHEITVTGD+VP PFTSFE TGFP
Sbjct: 112 HDPPNGIVGAGHGGSSVRGQGSSGPGSGASTESYRRRHEITVTGDDVPQPFTSFESTGFP 171
Query: 968 SELLREVLQAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRVHKN 789
E++REV AGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKR+ N
Sbjct: 172 PEIIREVYSAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNN 231
Query: 788 RQMGPTVLVLSPTRELATQIQVEAVKFGKSSKILCTCLYGGAPKGPQLRELDRGTDIVVA 609
QMGPTVLVLSPTRELATQIQ EAVKFG+SS++ CTCLYGGAPKGPQLR+LDRG DIVVA
Sbjct: 232 PQMGPTVLVLSPTRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVA 291
Query: 608 TPGRLNDILEMRRISLSQVTYLVLDEADRMLDMGFEPQIRKIVKEIPARRQTLMYTA 438
TPGRLNDILEMRR+SL QV+YLVLDEADRMLDMGFEPQIRKIVKE+PARRQTLMYTA
Sbjct: 292 TPGRLNDILEMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTA 348
Score = 205 bits (522), Expect(2) = 0.0
Identities = 100/112 (89%), Positives = 105/112 (93%)
Frame = -1
Query: 337 QYIEVLAPMEKHRRLEQILRSQEPRSKVIIFCSTKKMCDQLGRNLTRQFSAAVIHGDKSQ 158
QY+EVL MEKH+RLEQILRSQEP SK+IIFCSTKKMCDQL RNLTR F AA IHGDKSQ
Sbjct: 384 QYVEVLPYMEKHKRLEQILRSQEPGSKIIIFCSTKKMCDQLARNLTRPFGAAAIHGDKSQ 443
Query: 157 GERDYVLNQFRSGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 2
GERDYVLNQFR+GRSPVLVATDVAARGLDIKDIRVV+NYDFPTGVEDYVHRI
Sbjct: 444 GERDYVLNQFRTGRSPVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 495
>ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 2
[Vitis vinifera]
Length = 828
Score = 464 bits (1195), Expect(2) = 0.0
Identities = 248/357 (69%), Positives = 269/357 (75%), Gaps = 7/357 (1%)
Frame = -3
Query: 1487 MAATATVTTSAPRYAPEDPTLPKPWKGLVDGKTGYLYYWNPETNVTQYERP-----SGSK 1323
MAATAT PRYAPEDPTLPKPWKGLVDGKTGYLY+WNPETNVTQYERP S +
Sbjct: 1 MAATAT----GPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPERPGASSNA 56
Query: 1322 GSAXXXXXXXXXXXXXXXXXXXXXXPHGNGF-IDDDRYGRSSNGGSKFSSGTRGHESTRS 1146
A +G +DD+Y R+ N GT S
Sbjct: 57 SLAPPPKSSASISSSVQVQQSSQGQRRDHGLNEEDDKYNRARNLQQSARGGT-----VHS 111
Query: 1145 GSHPNGIIAALPGGTSVRPY-XXXXXXXXSPDAYRRRHEITVTGDNVPPPFTSFEDTGFP 969
PNGI+ A GG+SVR S ++YRRRHEITVTGD+VP PFTSFE TGFP
Sbjct: 112 HDPPNGIVGAGHGGSSVRGQGSSGPGSGASTESYRRRHEITVTGDDVPQPFTSFESTGFP 171
Query: 968 SELLREVLQAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRVHKN 789
E++REV AGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKR+ N
Sbjct: 172 PEIIREVYSAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNN 231
Query: 788 RQMGPTVLVLSPTRELATQIQVEAVKFGKSSKILCTCLYGGAPKGPQLRELDRGTDIVVA 609
QMGPTVLVLSPTRELATQIQ EAVKFG+SS++ CTCLYGGAPKGPQLR+LDRG DIVVA
Sbjct: 232 PQMGPTVLVLSPTRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVA 291
Query: 608 TPGRLNDILEMRRISLSQVTYLVLDEADRMLDMGFEPQIRKIVKEIPARRQTLMYTA 438
TPGRLNDILEMRR+SL QV+YLVLDEADRMLDMGFEPQIRKIVKE+PARRQTLMYTA
Sbjct: 292 TPGRLNDILEMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTA 348
Score = 205 bits (522), Expect(2) = 0.0
Identities = 100/112 (89%), Positives = 105/112 (93%)
Frame = -1
Query: 337 QYIEVLAPMEKHRRLEQILRSQEPRSKVIIFCSTKKMCDQLGRNLTRQFSAAVIHGDKSQ 158
QY+EVL MEKH+RLEQILRSQEP SK+IIFCSTKKMCDQL RNLTR F AA IHGDKSQ
Sbjct: 384 QYVEVLPYMEKHKRLEQILRSQEPGSKIIIFCSTKKMCDQLARNLTRPFGAAAIHGDKSQ 443
Query: 157 GERDYVLNQFRSGRSPVLVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRI 2
GERDYVLNQFR+GRSPVLVATDVAARGLDIKDIRVV+NYDFPTGVEDYVHRI
Sbjct: 444 GERDYVLNQFRTGRSPVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 495