BLASTX nr result

ID: Atractylodes22_contig00000847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000847
         (1383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus...   456   e-126
gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana ...   440   e-121
gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana ta...   439   e-120
gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humul...   424   e-116
ref|XP_002283364.1| PREDICTED: geranylgeranyl pyrophosphate synt...   418   e-114

>gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus]
          Length = 356

 Score =  456 bits (1174), Expect = e-126
 Identities = 250/375 (66%), Positives = 274/375 (73%)
 Frame = +1

Query: 163  MRSLSLVDSWVQTCSMFNGXXXXXFIGLICATPLKCSNPNFKNHLXXXXXXXXXXXXXXX 342
            MR +SLV S    CS+F G         I  TP+  + P FK H                
Sbjct: 1    MRPMSLVHS----CSIFTGS------SFIKTTPIN-NKPTFKIHQRPTIRSTISAAIV-- 47

Query: 343  XXXXXKEEQETLGENYQKSTFNFKAYMGEKANSVNKALDESISVKTPPTIHQAMRYSLLA 522
                  EE+    +   K TFNF AYM  K NSV+KALDESI +K PPTIH+AMRYSLLA
Sbjct: 48   ------EEEVVELQQKPKPTFNFNAYMLGKGNSVHKALDESIMIKNPPTIHEAMRYSLLA 101

Query: 523  GGKRVRPILCIAACELVGGDQSTAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTNH 702
            GGKRVRPILCIAACELVGG+++TAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTNH
Sbjct: 102  GGKRVRPILCIAACELVGGEEATAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTNH 161

Query: 703  KVYGEDVAVLAGDSLLALAFQHVSSATAGASPARVLAAVGELAKSIGTEGLVAGQVVDIA 882
            KVYGEDVAVLAGDSLLA AF++VSS T GASPARVLAA+GELAKSIGTEGLVAGQVVDIA
Sbjct: 162  KVYGEDVAVLAGDSLLAFAFEYVSSRTEGASPARVLAAIGELAKSIGTEGLVAGQVVDIA 221

Query: 883  STGAKGVGLDQLEFIHIHKTXXXXXXXXXXXXXXXXXSETQVEKLRKFARCIGLLFQVVD 1062
            STG + +GLDQLEFIHIHKT                 S+ QVEKLR FARCIGLLFQVVD
Sbjct: 222  STGGQDIGLDQLEFIHIHKTAALLEASVVLGAILGGGSDAQVEKLRTFARCIGLLFQVVD 281

Query: 1063 DILDVTKTSEELGKTAGKDLVADKMTYPKLMGMEKSRQFXXXXXXXXXXXXXGFESYKAV 1242
            DILDVTK+SEELGKTAGKDL+ DK TYPKL+G++KSRQF              FES  AV
Sbjct: 282  DILDVTKSSEELGKTAGKDLLVDKTTYPKLLGLDKSRQFAEELLAEAKQQLEEFESQAAV 341

Query: 1243 APLVALAEYIAYRQN 1287
            APL+ALAEYIAYRQN
Sbjct: 342  APLLALAEYIAYRQN 356


>gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata]
          Length = 366

 Score =  440 bits (1131), Expect = e-121
 Identities = 236/376 (62%), Positives = 270/376 (71%), Gaps = 1/376 (0%)
 Frame = +1

Query: 163  MRSLSLVDSWV-QTCSMFNGXXXXXFIGLICATPLKCSNPNFKNHLXXXXXXXXXXXXXX 339
            MRS++LVDSW  Q CS+FN              P+K  NP+F                  
Sbjct: 1    MRSMNLVDSWAAQVCSVFNQTIPNKTFTGFMKIPVK--NPSFLKQ-------KRPFSALS 51

Query: 340  XXXXXXKEEQETLGENYQKSTFNFKAYMGEKANSVNKALDESISVKTPPTIHQAMRYSLL 519
                  KE++       QK  FNFK Y+ EKA SVNKALDE++ VK PP I++AMRYSLL
Sbjct: 52   VSAIATKEDERVKEAGTQKEQFNFKTYVAEKAISVNKALDEAVIVKDPPVIYEAMRYSLL 111

Query: 520  AGGKRVRPILCIAACELVGGDQSTAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTN 699
            AGGKRVRP+LC+AACELVGGDQS AMPAACAVEMIHTMSLIHDDLPCMDNDD RRGKPTN
Sbjct: 112  AGGKRVRPMLCLAACELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDIRRGKPTN 171

Query: 700  HKVYGEDVAVLAGDSLLALAFQHVSSATAGASPARVLAAVGELAKSIGTEGLVAGQVVDI 879
            HKVYGEDVAVLAGDSLLA AF+ +++ATAG SP+R+LAA+GELAKSIGTEGLVAGQV DI
Sbjct: 172  HKVYGEDVAVLAGDSLLAFAFEFIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADI 231

Query: 880  ASTGAKGVGLDQLEFIHIHKTXXXXXXXXXXXXXXXXXSETQVEKLRKFARCIGLLFQVV 1059
            A TG   VGLD LEFIHIHKT                 ++ +VEKLR+FARCIGLLFQVV
Sbjct: 232  ACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRRFARCIGLLFQVV 291

Query: 1060 DDILDVTKTSEELGKTAGKDLVADKMTYPKLMGMEKSRQFXXXXXXXXXXXXXGFESYKA 1239
            DDILDVTK+SEELGKTAGKDLV DK TYPKL+G+EK+++F              F+ +KA
Sbjct: 292  DDILDVTKSSEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNRDAKQQLADFDPHKA 351

Query: 1240 VAPLVALAEYIAYRQN 1287
             APLVALA+YIA RQN
Sbjct: 352  -APLVALADYIANRQN 366


>gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
          Length = 366

 Score =  439 bits (1128), Expect = e-120
 Identities = 234/376 (62%), Positives = 270/376 (71%), Gaps = 1/376 (0%)
 Frame = +1

Query: 163  MRSLSLVDSWV-QTCSMFNGXXXXXFIGLICATPLKCSNPNFKNHLXXXXXXXXXXXXXX 339
            MRS++LVDSW  Q CS+FN              P+K  NP+F                  
Sbjct: 1    MRSMNLVDSWAAQVCSVFNQTIPNKTFTGFMKIPVK--NPSFLKQ-------KRPFSALS 51

Query: 340  XXXXXXKEEQETLGENYQKSTFNFKAYMGEKANSVNKALDESISVKTPPTIHQAMRYSLL 519
                  KE+++      QK  FNFK Y+ EKA SVNKALDE++ VK PP IH+AMRYSLL
Sbjct: 52   VSAIATKEDEKVKEVETQKEQFNFKTYVAEKAISVNKALDEAVIVKDPPVIHEAMRYSLL 111

Query: 520  AGGKRVRPILCIAACELVGGDQSTAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTN 699
            AGGKRVRP+LC+AACELVGGDQS AMPAACAVEMIHTMSLIHDDLPCMDNDD RRGKPTN
Sbjct: 112  AGGKRVRPMLCLAACELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 171

Query: 700  HKVYGEDVAVLAGDSLLALAFQHVSSATAGASPARVLAAVGELAKSIGTEGLVAGQVVDI 879
            HKVYGEDVAVLAGDSLLA AF+++++ATAG SP+R+LAA+GELAKSIGTEGLVAGQV DI
Sbjct: 172  HKVYGEDVAVLAGDSLLAFAFEYIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADI 231

Query: 880  ASTGAKGVGLDQLEFIHIHKTXXXXXXXXXXXXXXXXXSETQVEKLRKFARCIGLLFQVV 1059
            A TG   VGLD LEFIHIHKT                 ++ +VEKLR FARCIGLLFQVV
Sbjct: 232  ACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRIFARCIGLLFQVV 291

Query: 1060 DDILDVTKTSEELGKTAGKDLVADKMTYPKLMGMEKSRQFXXXXXXXXXXXXXGFESYKA 1239
            DDILDVTK+SE LGKTAGKDL  DK TYPKL+G+EK+++F              F+ +KA
Sbjct: 292  DDILDVTKSSEVLGKTAGKDLAVDKTTYPKLLGLEKAKEFAAELNRDAKQQLVEFDPHKA 351

Query: 1240 VAPLVALAEYIAYRQN 1287
             APL+ALA+YIAYR+N
Sbjct: 352  -APLIALADYIAYREN 366


>gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
          Length = 369

 Score =  424 bits (1090), Expect = e-116
 Identities = 227/377 (60%), Positives = 269/377 (71%), Gaps = 2/377 (0%)
 Frame = +1

Query: 163  MRSLSLVDSWVQTCSMFN--GXXXXXFIGLICATPLKCSNPNFKNHLXXXXXXXXXXXXX 336
            M S++L  +WVQTCSMFN  G        L+   PLK    +F+                
Sbjct: 1    MSSVNL--TWVQTCSMFNQAGRSRSSTFNLLHYHPLKKVPFSFQT-----PKQRRPTSSF 53

Query: 337  XXXXXXXKEEQETLGENYQKSTFNFKAYMGEKANSVNKALDESISVKTPPTIHQAMRYSL 516
                    E++    +  QKSTFNFK+YM +KANSVN+ALD ++ ++ P  IH+AMRYSL
Sbjct: 54   SSISAVLTEQEAVTEDEEQKSTFNFKSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSL 113

Query: 517  LAGGKRVRPILCIAACELVGGDQSTAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPT 696
            LAGGKRVRP+LC++ACELVGGD+S AMPAACAVEMIHTMSLIHDDLPCMDNDD RRGKPT
Sbjct: 114  LAGGKRVRPVLCLSACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPT 173

Query: 697  NHKVYGEDVAVLAGDSLLALAFQHVSSATAGASPARVLAAVGELAKSIGTEGLVAGQVVD 876
            NHKV+GEDVAVLAGD+LLA AF+HV+ +T G   AR++ A+GELAKSIG+EGLVAGQVVD
Sbjct: 174  NHKVFGEDVAVLAGDALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVD 233

Query: 877  IASTGAKGVGLDQLEFIHIHKTXXXXXXXXXXXXXXXXXSETQVEKLRKFARCIGLLFQV 1056
            I S G   VGL+QLEFIH+HKT                 ++ QVE+LR FARCIGLLFQ 
Sbjct: 234  IDSEGLANVGLEQLEFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQA 293

Query: 1057 VDDILDVTKTSEELGKTAGKDLVADKMTYPKLMGMEKSRQFXXXXXXXXXXXXXGFESYK 1236
            VDDILDVTK+S+ELGKTAGKDLVADK TYP+LMG+EKSR+F             GF+  K
Sbjct: 294  VDDILDVTKSSQELGKTAGKDLVADKATYPRLMGIEKSREFAEKLNREAQEHLGGFDPQK 353

Query: 1237 AVAPLVALAEYIAYRQN 1287
            A APL+ALA YIAYRQN
Sbjct: 354  A-APLIALANYIAYRQN 369


>ref|XP_002283364.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
            [Vitis vinifera]
          Length = 371

 Score =  418 bits (1075), Expect = e-114
 Identities = 214/307 (69%), Positives = 249/307 (81%)
 Frame = +1

Query: 367  QETLGENYQKSTFNFKAYMGEKANSVNKALDESISVKTPPTIHQAMRYSLLAGGKRVRPI 546
            +E  G   +++ F+FK YM +KA+SV+KALDE++ VK+P  IH+AMRYSLLAGGKRVRP 
Sbjct: 66   KEGKGPTQKETPFSFKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKRVRPA 125

Query: 547  LCIAACELVGGDQSTAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVYGEDVA 726
            LC+AACELVGGD+S AMPAACAVEMIHTMSLIHDDLPCMDNDD RRGKPTNHKV+GEDVA
Sbjct: 126  LCLAACELVGGDESNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVA 185

Query: 727  VLAGDSLLALAFQHVSSATAGASPARVLAAVGELAKSIGTEGLVAGQVVDIASTGAKGVG 906
            VLAGDSLLA AF+H+++AT+G S +R++AAVGELAKSIG EGLVAGQVVDI+STG   VG
Sbjct: 186  VLAGDSLLAFAFEHLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVG 245

Query: 907  LDQLEFIHIHKTXXXXXXXXXXXXXXXXXSETQVEKLRKFARCIGLLFQVVDDILDVTKT 1086
            LDQLEFIHIHKT                 S+ +VEKLRK+AR +GLLFQVVDDILDVTK+
Sbjct: 246  LDQLEFIHIHKTAALLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILDVTKS 305

Query: 1087 SEELGKTAGKDLVADKMTYPKLMGMEKSRQFXXXXXXXXXXXXXGFESYKAVAPLVALAE 1266
            S+ELGKTAGKDLV DK TYPKLMG+EKSR+F             GF+  KA APL+ALA+
Sbjct: 306  SQELGKTAGKDLVTDKATYPKLMGLEKSREFAENLNKEAKEQLSGFDLEKA-APLIALAD 364

Query: 1267 YIAYRQN 1287
            YIAYRQN
Sbjct: 365  YIAYRQN 371


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