BLASTX nr result

ID: Atractylodes22_contig00000790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000790
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319199.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002334129.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
emb|CBI31208.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002268494.2| PREDICTED: zinc finger protein VAR3, chlorop...    67   2e-09
ref|XP_002530944.1| hypothetical protein RCOM_0844850 [Ricinus c...    58   7e-07

>ref|XP_002319199.1| predicted protein [Populus trichocarpa] gi|222857575|gb|EEE95122.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 49/121 (40%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
 Frame = +3

Query: 6   ELHGVTGPTSAVLHDDFPQIMPVRKGENRFVDSKTIHQPFS--LYPRQQAMEQGSTXXXX 179
           ELH VT  TSA+  DDFP+IMP+RKGEN+FV SK   +  +  +Y R  AMEQ +T    
Sbjct: 476 ELHNVTDLTSAISDDDFPEIMPLRKGENKFVVSKKKDRSLTSPMYKRHAAMEQANTTNSV 535

Query: 180 XXXXXXXXXXAKKDDQQQQPESTDLTVKPTDDISLSLSQENKNLVQGTRNQQMSGTDNLD 359
                     AKKD+  QQP+ TD   K   + S ++S+  K +  GT  Q        D
Sbjct: 536 PFVPFPPNYFAKKDN--QQPDETDSHDKGVSETSKNISE--KKIFTGTAPQSSKNQSVGD 591

Query: 360 S 362
           S
Sbjct: 592 S 592


>ref|XP_002334129.1| predicted protein [Populus trichocarpa] gi|222869692|gb|EEF06823.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
 Frame = +3

Query: 6   ELHGVTGPTSAVLHDDFPQIMPVRKGENRFVDSKTIHQPFS--LYPRQQAMEQGSTXXXX 179
           ELH VT  TSA+  DDFP+IMP+RKGEN+FV SK   +  +  +Y R  AMEQ +T    
Sbjct: 564 ELHNVTDLTSAISDDDFPEIMPLRKGENKFVVSKKKDRSLTSPMYKRHAAMEQANTTNSV 623

Query: 180 XXXXXXXXXXAKKDDQQQQPESTDLTVKPTDDISLSLSQE 299
                     AKKD+  QQP+ TD   K   + S S + E
Sbjct: 624 PFVPFPPNYFAKKDN--QQPDETDSHDKGVSETSSSATLE 661


>emb|CBI31208.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
 Frame = +3

Query: 6   ELHGVTGPTSAVLHDDFPQIMPVRKGENRFVDSKTIHQPFS--LYPRQQAMEQGSTXXXX 179
           ELH VT  +SA+  +DFP+IMP+RKGENRFV SK   +  +   Y R+ AM+Q S     
Sbjct: 468 ELHDVTDLSSAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPTYKRRLAMDQASKTNFV 527

Query: 180 XXXXXXXXXXAKKDDQQQQPESTDLTVKPTDDISLSLSQ------ENKNLVQGTRNQQMS 341
                     AKKD  +QQP   D T K TD+++ +L++      +N+N+ QG   + + 
Sbjct: 528 PFVPFPPDYFAKKD--KQQPNEADSTQKVTDNMT-NLNESSPGLPKNQNVRQGWTGKSLE 584

Query: 342 GT 347
           G+
Sbjct: 585 GS 586


>ref|XP_002268494.2| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Vitis
           vinifera]
          Length = 879

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 52/134 (38%), Positives = 68/134 (50%), Gaps = 15/134 (11%)
 Frame = +3

Query: 6   ELHGVTGPTSAVLHDDFPQIMPVRKGENRFVDSKTIHQPFS--LYPRQQAMEQGSTXXXX 179
           ELH VT  +SA+  +DFP+IMP+RKGENRFV SK   +  +   Y R+ AM+Q S     
Sbjct: 597 ELHDVTDLSSAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPTYKRRLAMDQASKTNFV 656

Query: 180 XXXXXXXXXXAKKDDQQQQPESTDLTVK------PTDDISLSLSQ------ENKNLVQGT 323
                     AKKD  +QQP   D T K      PT  I   LS+       +++ +Q T
Sbjct: 657 PFVPFPPDYFAKKD--KQQPNEADSTQKVTGETSPTSAIPEKLSERLDDRIHDRDHMQPT 714

Query: 324 RNQQMS-GTDNLDS 362
            NQ  S G+ N  S
Sbjct: 715 ENQTNSPGSWNFSS 728


>ref|XP_002530944.1| hypothetical protein RCOM_0844850 [Ricinus communis]
           gi|223529459|gb|EEF31416.1| hypothetical protein
           RCOM_0844850 [Ricinus communis]
          Length = 916

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
 Frame = +3

Query: 6   ELHGVTGPTSAVLHDDFPQIMPVRKGENRFVDSKTIHQPFS--LYPRQQAMEQGSTXXXX 179
           ELH V    S +  +DFP+IMP+RKGENRFV SK   +  +  +Y R+ AMEQ S     
Sbjct: 578 ELHNVKDLASEISDEDFPEIMPMRKGENRFVVSKRKDRSLTSPMYKRRMAMEQASDTNFV 637

Query: 180 XXXXXXXXXXAKKDDQQ 230
                     A+KD+QQ
Sbjct: 638 PFVPFPPNYFAQKDNQQ 654


Top