BLASTX nr result

ID: Atractylodes22_contig00000770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000770
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein C...    67   2e-09
ref|XP_003534048.1| PREDICTED: chlorophyll a-b binding protein C...    60   2e-07
ref|XP_003548249.1| PREDICTED: chlorophyll a-b binding protein C...    57   1e-06
gb|ACU23386.1| unknown [Glycine max]                                   57   1e-06
ref|XP_002329192.1| light-harvesting complex II protein Lhcb5 [P...    57   2e-06

>ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
           [Vitis vinifera] gi|147770824|emb|CAN76428.1|
           hypothetical protein VITISV_023565 [Vitis vinifera]
           gi|297734735|emb|CBI16969.3| unnamed protein product
           [Vitis vinifera]
          Length = 290

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/35 (91%), Positives = 34/35 (97%)
 Frame = -3

Query: 155 LGVSKMLGNPLNFNGASRTAPSASSPVTFKTVALF 51
           LGVS+MLGNPLNF+GASRTAPSASSP TFKTVALF
Sbjct: 13  LGVSEMLGNPLNFSGASRTAPSASSPATFKTVALF 47


>ref|XP_003534048.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
           [Glycine max]
          Length = 291

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = -3

Query: 155 LGVSKMLGNPLNFNGASRTAPSASSPVTFKTVALF 51
           LG+S+MLGNP+NF+GA+R APSASSP +FKTVALF
Sbjct: 13  LGMSEMLGNPINFSGATRPAPSASSPASFKTVALF 47


>ref|XP_003548249.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
           [Glycine max]
          Length = 289

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = -3

Query: 155 LGVSKMLGNPLNFNGASRTAPSASSPVTFKTVALF 51
           LG+S+MLGNP+N +GA+R APSASSP +FKTVALF
Sbjct: 13  LGMSEMLGNPINLSGATRPAPSASSPASFKTVALF 47


>gb|ACU23386.1| unknown [Glycine max]
          Length = 289

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = -3

Query: 155 LGVSKMLGNPLNFNGASRTAPSASSPVTFKTVALF 51
           LG+S+MLGNP+N +GA+R APSASSP +FKTVALF
Sbjct: 13  LGMSEMLGNPINLSGATRPAPSASSPASFKTVALF 47


>ref|XP_002329192.1| light-harvesting complex II protein Lhcb5 [Populus trichocarpa]
           gi|118487642|gb|ABK95646.1| unknown [Populus
           trichocarpa] gi|222870973|gb|EEF08104.1|
           light-harvesting complex II protein Lhcb5 [Populus
           trichocarpa]
          Length = 290

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/36 (77%), Positives = 34/36 (94%), Gaps = 1/36 (2%)
 Frame = -3

Query: 155 LGVSKMLGNPLNFNGASRTA-PSASSPVTFKTVALF 51
           LGVS+MLGNPLNF+GA+R+A P+AS+P TFKTVALF
Sbjct: 13  LGVSEMLGNPLNFSGATRSASPAASTPATFKTVALF 48


Top