BLASTX nr result

ID: Atractylodes22_contig00000676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000676
         (1311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284195.1| PREDICTED: F-box protein At1g78100-like [Vit...   275   2e-71
ref|XP_002513900.1| conserved hypothetical protein [Ricinus comm...   274   3e-71
ref|XP_002307387.1| predicted protein [Populus trichocarpa] gi|2...   273   9e-71
ref|XP_002887721.1| F-box family protein [Arabidopsis lyrata sub...   255   2e-65
ref|NP_565169.1| F-box protein [Arabidopsis thaliana] gi|7526224...   254   3e-65

>ref|XP_002284195.1| PREDICTED: F-box protein At1g78100-like [Vitis vinifera]
          Length = 320

 Score =  275 bits (702), Expect = 2e-71
 Identities = 167/344 (48%), Positives = 215/344 (62%), Gaps = 4/344 (1%)
 Frame = -2

Query: 1169 DSFDRLPDPIILTIFNNISDIKTLIRCRAVSRRFSSLVPQSDSLLLXXXXXXXXXXXXXX 990
            DSFDRLPDP+IL IFN+++DIKTLIRCRAVS+RF+SLVPQ+++L+L              
Sbjct: 7    DSFDRLPDPLILVIFNSVADIKTLIRCRAVSKRFNSLVPQAETLVLKVDRVISTDSDGSF 66

Query: 989  XXXXXXXGFIKSIVKSIQDLISPPEDHTLQSTSSPHQSQNSPAMILRGFERIKELDIELP 810
                    F+KSI +S+  +ISP    +L     PH   NSP  ILRGF+RI+ L+IELP
Sbjct: 67   FLS-----FLKSIFRSLHHIISPK---SLPIQPRPH---NSPTQILRGFDRIRNLEIELP 115

Query: 809  TGDLRLEKRAGIKWKAEFGKTLKSCVILGFRCVXXXXXXXXXXXG---LKTRVVWTISAL 639
             GDL LEK A +KWKAEFGK LKSCVI+G+R +               LK RVVWTISAL
Sbjct: 116  GGDLCLEKGAVLKWKAEFGKRLKSCVIMGYRGLGEGEELDFGGDMDGGLKVRVVWTISAL 175

Query: 638  IAASARHYMVKEIVKENAHLSKLIVKDREGEGTVVMNELGIKEFREDKGENHDXXXXXXX 459
            IAASARHY+++E+++E+  L +L+++DR+GEGTVVM+   ++E R+ +GE          
Sbjct: 176  IAASARHYLLRELIREHRELERLVLRDRDGEGTVVMDREALRECRDGEGEEEQEEEAVEP 235

Query: 458  XXXXXGVWWRSNRTRVPAVWMRMRHEAKLELSN-GVTMEGATLVVVRPTTNAIGVVGATX 282
                       +RT+VPAV MRMRHE  LEL   GV M GATLVVV P  +  G    T 
Sbjct: 236  GERD------KSRTKVPAVQMRMRHEPLLELEGCGVRMGGATLVVVTPIKD--GRKTGTE 287

Query: 281  XXXXXEQRWDEGLVAAGRGFDGIYGEAVEKLIKRRSYLLEMNSF 150
                     + GLV     F+G++GEA   L+K R+YLLEMNSF
Sbjct: 288  ---------EAGLVC--DAFEGMFGEAARTLLKTRTYLLEMNSF 320


>ref|XP_002513900.1| conserved hypothetical protein [Ricinus communis]
            gi|223546986|gb|EEF48483.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 303

 Score =  274 bits (701), Expect = 3e-71
 Identities = 160/342 (46%), Positives = 214/342 (62%), Gaps = 1/342 (0%)
 Frame = -2

Query: 1172 IDSFDRLPDPIILTIFNNISDIKTLIRCRAVSRRFSSLVPQSDSLLLXXXXXXXXXXXXX 993
            +D FDRLPD +I+ IFN++S IKTLIRCR+VS+RF+SLVPQ++SLLL             
Sbjct: 1    MDGFDRLPDSLIVLIFNSVSHIKTLIRCRSVSKRFNSLVPQTESLLLTVDRVISTESDTE 60

Query: 992  XXXXXXXXGFIKSIVKSIQDLISPPEDHTLQSTSSPHQSQNSPAMILRGFERIKELDIEL 813
                     F+KS++KSI DL  P E+  +Q+ +    +QN+PA IL  FERI++L+IEL
Sbjct: 61   ILLLA----FLKSLLKSIHDLFKPDEEKPIQNVNL---TQNTPAQILSRFERIRDLEIEL 113

Query: 812  PTGDLRLEKRAGIKWKAEFGKTLKSCVILGFRCVXXXXXXXXXXXGLKTRVVWTISALIA 633
            P GDL+LEK   IKW+AE+GKTLKSCVI+GFR              LK RVVWTISALIA
Sbjct: 114  PAGDLKLEKGVVIKWRAEYGKTLKSCVIMGFR------TRNSDDFDLKARVVWTISALIA 167

Query: 632  ASARHYMVKEIVKENAHLSKLIVKDREGEGTVVMNELGIKEFREDKGENHDXXXXXXXXX 453
            ASARHY++K++V+E+  + +L++KD++ EGTVVM +  ++E R D               
Sbjct: 168  ASARHYLLKDVVREHEEMERLVLKDKDEEGTVVMEKDDLRECRIDMAARGKDEWE----- 222

Query: 452  XXXGVWWRSNRTRVPAVWMRMRHEAKLELSNGVTMEGATLVVVRPTTNAIGVVGATXXXX 273
                  W++ RT VP+V MR+RHE ++ LS+G  +EGATLVVVRP      V        
Sbjct: 223  ------WQARRTVVPSVRMRVRHETRVRLSDGTWLEGATLVVVRPCVADADV-------- 268

Query: 272  XXEQRWDEGLVAAGRGFDG-IYGEAVEKLIKRRSYLLEMNSF 150
                   E    A   F G +YGEAV+ L+K +SY+LEMNSF
Sbjct: 269  -------EDAELAMDAFGGEVYGEAVKLLLKTKSYVLEMNSF 303


>ref|XP_002307387.1| predicted protein [Populus trichocarpa] gi|222856836|gb|EEE94383.1|
            predicted protein [Populus trichocarpa]
          Length = 312

 Score =  273 bits (697), Expect = 9e-71
 Identities = 170/349 (48%), Positives = 214/349 (61%), Gaps = 7/349 (2%)
 Frame = -2

Query: 1175 AIDSFDRLPDPIILTIFNNISDIKTLIRCRAVSRRFSSLVPQSDSLLLXXXXXXXXXXXX 996
            A+D FDRLPD +IL IFN+ISDIK LIRCR+VS+RF+SLVPQ++SL L            
Sbjct: 4    AMDGFDRLPDSLILLIFNSISDIKALIRCRSVSKRFNSLVPQTESLSLKVDCVISPESDS 63

Query: 995  XXXXXXXXXGFIKSIVKSIQDLISPPEDHTLQSTSSPHQSQNSPAMILRGFERIKELDIE 816
                        KS++KSI DL  P    T ++     Q+QNSPA IL  F+RI++L IE
Sbjct: 64   DSLFT-----LFKSLLKSIHDLFKPDPKPTARN-----QTQNSPARILSQFDRIRDLQIE 113

Query: 815  LPTGDLRLEKRAGIKWKAEFGKTLKSCVILGFRCV-----XXXXXXXXXXXGLKTRVVWT 651
            LP GDL+LEK A IKW+AEFGK+LKSCVILGFR V                GLKTRVVW 
Sbjct: 114  LPAGDLKLEKGAVIKWRAEFGKSLKSCVILGFRRVANPEGNSADEEIDFTGGLKTRVVWA 173

Query: 650  ISALIAASARHYMVKEIVKENAHLSKLIVKDREGEGTVVMNELGIKEFREDK--GENHDX 477
            ISALIAASARHY++ ++VK +  + +L++ DREGEGTV M + G++E RE    GE  + 
Sbjct: 174  ISALIAASARHYLLNDVVKGHREMERLVLVDREGEGTVAMEKEGLRECREAARGGEWEED 233

Query: 476  XXXXXXXXXXXGVWWRSNRTRVPAVWMRMRHEAKLELSNGVTMEGATLVVVRPTTNAIGV 297
                              RT VP+V MRMRHE +++L +GV MEG TLVVVRP +   G 
Sbjct: 234  ----------------GGRTVVPSVRMRMRHEQRVQLKDGVWMEGVTLVVVRPCSG--GG 275

Query: 296  VGATXXXXXXEQRWDEGLVAAGRGFDGIYGEAVEKLIKRRSYLLEMNSF 150
             G            ++  +A G    GIYGEAV+ L+K +SYLLEMNSF
Sbjct: 276  DG------------EDAELALGAFGGGIYGEAVQVLLKNKSYLLEMNSF 312


>ref|XP_002887721.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333562|gb|EFH63980.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 333

 Score =  255 bits (651), Expect = 2e-65
 Identities = 156/356 (43%), Positives = 204/356 (57%), Gaps = 15/356 (4%)
 Frame = -2

Query: 1172 IDSFDRLPDPIILTIFNNISDIKTLIRCRAVSRRFSSLVPQSDSLLLXXXXXXXXXXXXX 993
            +D+FD +PDP+++ I N + D+KTLIRCR+VS+RF+SL  QSDSLLL             
Sbjct: 1    MDAFDAIPDPVVIDILNKVGDVKTLIRCRSVSKRFNSLATQSDSLLLQLDQILGATESDS 60

Query: 992  XXXXXXXXGFIKSIVKSIQDLISPPEDHTLQSTSSPHQSQNSPAMILRGFERIKELDIEL 813
                     F +S+ KSI  L+ P      ++     +S  +PA IL GFERI+ L++EL
Sbjct: 61   EIDSPIAS-FFRSLFKSIYGLL-PSFSKPAKTDEILTRSPKTPAQILAGFERIRNLEVEL 118

Query: 812  PTGDLRLEKRAGIKWKAEFGKTLKSCVILGFRCV---------------XXXXXXXXXXX 678
              GD++LEK A +KWKAEFGKTLKSCVI+ FR                            
Sbjct: 119  YGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATESTAVVDGGVESDSEFVC 178

Query: 677  GLKTRVVWTISALIAASARHYMVKEIVKENAHLSKLIVKDREGEGTVVMNELGIKEFRED 498
            GLKTRVVWTISAL+AAS RHY+++++VK++  + KLIV+DREGEGTVVM+  G+KE+RE 
Sbjct: 179  GLKTRVVWTISALMAASTRHYLMRDLVKDHKDMEKLIVRDREGEGTVVMDAAGMKEYRET 238

Query: 497  KGENHDXXXXXXXXXXXXGVWWRSNRTRVPAVWMRMRHEAKLELSNGVTMEGATLVVVRP 318
            +    D                   RT VP+V M MRH   L L +G+ +E ATLVVVRP
Sbjct: 239  EARGDDKTLERV-----------GERTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRP 287

Query: 317  TTNAIGVVGATXXXXXXEQRWDEGLVAAGRGFDGIYGEAVEKLIKRRSYLLEMNSF 150
            T    GV           + +      AG G D +YGEAV  L+KRR  +LEMNSF
Sbjct: 288  T----GVASDDNDVELVTEAF------AGDGGDCMYGEAVTALLKRRRNVLEMNSF 333


>ref|NP_565169.1| F-box protein [Arabidopsis thaliana]
            gi|75262248|sp|Q9C9S2.1|FB91_ARATH RecName: Full=F-box
            protein At1g78100 gi|12324249|gb|AAG52096.1|AC012680_7
            unknown protein; 22671-23675 [Arabidopsis thaliana]
            gi|15450976|gb|AAK96759.1| Unknown protein [Arabidopsis
            thaliana] gi|20148731|gb|AAM10256.1| unknown protein
            [Arabidopsis thaliana] gi|332197946|gb|AEE36067.1| F-box
            protein [Arabidopsis thaliana]
          Length = 334

 Score =  254 bits (649), Expect = 3e-65
 Identities = 155/358 (43%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
 Frame = -2

Query: 1172 IDSFDRLPDPIILTIFNNISDIKTLIRCRAVSRRFSSLVPQSDSLLLXXXXXXXXXXXXX 993
            +D+FD +PDP+++ I N + D+KTLIRCR+VS+RF+SL  QS+SLLL             
Sbjct: 1    MDAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGATESDS 60

Query: 992  XXXXXXXXGFIKSIVKSIQDLISPPEDHTLQSTSSPHQSQNSPAMILRGFERIKELDIEL 813
                     F +S+ KSI  L+ P       S     +S  +PA IL GFERI+ L++EL
Sbjct: 61   EIDSPIAS-FFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRNLEVEL 119

Query: 812  PTGDLRLEKRAGIKWKAEFGKTLKSCVILGFRCV---------------XXXXXXXXXXX 678
              GD++LEK A +KWKAEFGKTLKSCVI+ FR                            
Sbjct: 120  YGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVESDSEFVC 179

Query: 677  GLKTRVVWTISALIAASARHYMVKEIVKENAHLSKLIVKDREGEGTVVMNELGIKEFRED 498
            GLKTRVVWTISAL+AAS RHY+++++VK++  + KLIV+D +GEGTVVM+  G+KE+RE 
Sbjct: 180  GLKTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAGMKEYRET 239

Query: 497  --KGENHDXXXXXXXXXXXXGVWWRSNRTRVPAVWMRMRHEAKLELSNGVTMEGATLVVV 324
              +G+N +                   RT VP+V M MRH   L L +G+ +E ATLVVV
Sbjct: 240  EVRGDNKESERV-------------GERTVVPSVRMSMRHAPSLMLKSGICLEAATLVVV 286

Query: 323  RPTTNAIGVVGATXXXXXXEQRWDEGLVAAGRGFDGIYGEAVEKLIKRRSYLLEMNSF 150
            RPT    GV           + +      AG G D +YGEAV  L+KRR  +LEMNSF
Sbjct: 287  RPT----GVASDDNDVELVTEAF------AGDGDDCMYGEAVTALLKRRRNVLEMNSF 334


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