BLASTX nr result

ID: Atractylodes22_contig00000623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000623
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS65094.1| holocarboxylase synthetase [Elaeis guineensis]         103   1e-20
ref|XP_002300905.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
gb|ACF06614.1| holocarboxylase synthetase [Elaeis guineensis]         102   3e-20
ref|XP_004139686.1| PREDICTED: uncharacterized protein LOC101216...   101   7e-20
ref|XP_002524331.1| conserved hypothetical protein [Ricinus comm...   100   2e-19

>gb|AFS65094.1| holocarboxylase synthetase [Elaeis guineensis]
          Length = 216

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/87 (60%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = -1

Query: 289 LSQLYSQAMSQQKLSFLSGERHGLEMLYQWISRQHGEGLRVTSDDILAYIQAELESSGEE 110
           LSQLY+QAM+QQK+SF +GERH LE +YQWI RQH EG RV  DDIL YIQ E++  GE+
Sbjct: 30  LSQLYTQAMNQQKVSFQAGERHSLEKIYQWILRQHEEGSRVNIDDILTYIQNEMDYGGED 89

Query: 109 PSMAPRTLQQNQ-PHTQPANPFTNSDS 32
             ++PR   Q+Q PH Q A  FTNS+S
Sbjct: 90  GIVSPRLQFQHQHPHVQTAMHFTNSNS 116


>ref|XP_002300905.1| predicted protein [Populus trichocarpa] gi|222842631|gb|EEE80178.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  102 bits (255), Expect = 3e-20
 Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 6/101 (5%)
 Frame = -1

Query: 289 LSQLYSQAMSQQKLSFLSGERHGLEMLYQWISRQHGEGLRVTSDDILAYIQAELESSGEE 110
           LSQLY+Q+M+ QKLSF +GERHGLE LYQWI RQ   G RVT+ DI+ Y+Q EL+  GEE
Sbjct: 30  LSQLYTQSMNHQKLSFQAGERHGLEKLYQWIWRQQEGGSRVTTFDIINYLQNELDYCGEE 89

Query: 109 PSMAPRTLQQNQPHTQPANPFTN------SDSSSMPTAAQG 5
           PSM+PRT  Q+Q ++QP  P TN      S SS +P   QG
Sbjct: 90  PSMSPRTPHQHQ-NSQPI-PSTNSTFLVSSGSSGLPATGQG 128


>gb|ACF06614.1| holocarboxylase synthetase [Elaeis guineensis]
          Length = 216

 Score =  102 bits (255), Expect = 3e-20
 Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = -1

Query: 289 LSQLYSQAMSQQKLSFLSGERHGLEMLYQWISRQHGEGLRVTSDDILAYIQAELESSGEE 110
           LSQLY+QAM+QQK+SF +GERH LE +YQWI RQH EG RV  DDIL Y+Q E++  GE+
Sbjct: 30  LSQLYTQAMNQQKVSFQAGERHSLEKIYQWILRQHEEGSRVNIDDILTYMQNEMDYGGED 89

Query: 109 PSMAPRTLQQNQ-PHTQPANPFTNSDS 32
             ++PR   Q+Q PH Q A  FTNS+S
Sbjct: 90  GIVSPRLQFQHQHPHVQTAMHFTNSNS 116


>ref|XP_004139686.1| PREDICTED: uncharacterized protein LOC101216474 [Cucumis sativus]
           gi|449503237|ref|XP_004161902.1| PREDICTED:
           uncharacterized protein LOC101229005 [Cucumis sativus]
          Length = 217

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/100 (53%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
 Frame = -1

Query: 289 LSQLYSQAMSQQKLSFLSGERHGLEMLYQWISRQHGEGLRVTSDDILAYIQAELESSGEE 110
           LSQLY+QAM+ QKLSF +GERH +E LYQW+ RQ   G RVT+ D+L YI+ EL+  GEE
Sbjct: 30  LSQLYTQAMNHQKLSFQAGERHAMEKLYQWMFRQQEGGSRVTTTDVLNYIRNELDYCGEE 89

Query: 109 PSMAPRTLQQNQPHTQPANPFTNSD-----SSSMPTAAQG 5
           PSM+PR       H QP   FTNS       S   T  QG
Sbjct: 90  PSMSPRPAVHQHQHAQPTMQFTNSSFPASGLSGQATTGQG 129


>ref|XP_002524331.1| conserved hypothetical protein [Ricinus communis]
           gi|223536422|gb|EEF38071.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  100 bits (248), Expect = 2e-19
 Identities = 57/99 (57%), Positives = 69/99 (69%), Gaps = 4/99 (4%)
 Frame = -1

Query: 289 LSQLYSQAMSQQKLSFLSGERHGLEMLYQWISRQHGEGLRVTSDDILAYIQAELESSGEE 110
           LSQLY+Q+M+ QKLSF +GERHGLE LYQWI RQ   G RVT+ DI+ YIQ EL+ SGEE
Sbjct: 30  LSQLYTQSMNHQKLSFQAGERHGLEKLYQWIWRQQEGGSRVTTVDIINYIQNELDYSGEE 89

Query: 109 PSMAPRTLQQNQPHTQPA----NPFTNSDSSSMPTAAQG 5
           P  +PR  QQ+Q  +QP     + F +S SS   TA QG
Sbjct: 90  PPASPRAPQQHQ-SSQPIQFTNSSFLSSGSSGPITAGQG 127


Top