BLASTX nr result

ID: Atractylodes22_contig00000592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000592
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...   144   6e-33
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   144   6e-33
emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]   144   6e-33
ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   144   8e-33
ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-l...   142   2e-32

>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
           vinifera]
          Length = 447

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/123 (58%), Positives = 83/123 (67%), Gaps = 8/123 (6%)
 Frame = -1

Query: 347 NGKHKMEGSMVPLVVKWADTEKERXXXXXXXXXXXXXXXXXADPTQHPSLFGALPMGYIS 168
           NGKHKMEGS VPLVVKWADTEKER                 AD  QHPSLFGALP+GY+ 
Sbjct: 174 NGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVP 233

Query: 167 PYNGYGYQAAGSYGLMQYRLPPGQNQPSFPNVIPHANQGNVF--------RGGTPRSYSV 12
           PYNGYGYQA G+YGLMQYR+PP Q+Q +F N+IP  NQG+          R   PR+Y+V
Sbjct: 234 PYNGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAV 293

Query: 11  PAA 3
           P+A
Sbjct: 294 PSA 296


>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
           vinifera] gi|296086641|emb|CBI32276.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/123 (58%), Positives = 83/123 (67%), Gaps = 8/123 (6%)
 Frame = -1

Query: 347 NGKHKMEGSMVPLVVKWADTEKERXXXXXXXXXXXXXXXXXADPTQHPSLFGALPMGYIS 168
           NGKHKMEGS VPLVVKWADTEKER                 AD  QHPSLFGALP+GY+ 
Sbjct: 164 NGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVP 223

Query: 167 PYNGYGYQAAGSYGLMQYRLPPGQNQPSFPNVIPHANQGNVF--------RGGTPRSYSV 12
           PYNGYGYQA G+YGLMQYR+PP Q+Q +F N+IP  NQG+          R   PR+Y+V
Sbjct: 224 PYNGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAV 283

Query: 11  PAA 3
           P+A
Sbjct: 284 PSA 286


>emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
          Length = 450

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/123 (58%), Positives = 83/123 (67%), Gaps = 8/123 (6%)
 Frame = -1

Query: 347 NGKHKMEGSMVPLVVKWADTEKERXXXXXXXXXXXXXXXXXADPTQHPSLFGALPMGYIS 168
           NGKHKMEGS VPLVVKWADTEKER                 AD  QHPSLFGALP+GY+ 
Sbjct: 218 NGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVP 277

Query: 167 PYNGYGYQAAGSYGLMQYRLPPGQNQPSFPNVIPHANQGNVF--------RGGTPRSYSV 12
           PYNGYGYQA G+YGLMQYR+PP Q+Q +F N+IP  NQG+          R   PR+Y+V
Sbjct: 278 PYNGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAV 337

Query: 11  PAA 3
           P+A
Sbjct: 338 PSA 340


>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  144 bits (363), Expect = 8e-33
 Identities = 74/124 (59%), Positives = 84/124 (67%), Gaps = 9/124 (7%)
 Frame = -1

Query: 347 NGKHKMEGSMVPLVVKWADTEKERXXXXXXXXXXXXXXXXXADPTQHPSLFGALPMGYIS 168
           NGKHKMEGS VPLVVKWADTEKER                 AD +QHPSLFGALPMGY+ 
Sbjct: 164 NGKHKMEGSSVPLVVKWADTEKERQARRAQKVQSQASNLPNAD-SQHPSLFGALPMGYVP 222

Query: 167 PYNGYGYQAAGSYGLMQYRLPPGQNQPSFPNVIPHANQGNVFRGGT---------PRSYS 15
            YNGYGYQA G+YGLM YRLPP Q+QP+F ++IP  NQGN  RGG          PR+Y+
Sbjct: 223 QYNGYGYQAPGTYGLMPYRLPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYA 282

Query: 14  VPAA 3
           +P A
Sbjct: 283 LPPA 286


>ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
           gi|449491521|ref|XP_004158924.1| PREDICTED: CUGBP
           Elav-like family member 2-like [Cucumis sativus]
          Length = 438

 Score =  142 bits (359), Expect = 2e-32
 Identities = 74/123 (60%), Positives = 82/123 (66%), Gaps = 8/123 (6%)
 Frame = -1

Query: 347 NGKHKMEGSMVPLVVKWADTEKERXXXXXXXXXXXXXXXXXADPTQHPSLFGALPMGYIS 168
           NGK KMEGS VPLVVKWADTEKER                 AD +QHPSLFGA+P+GY+ 
Sbjct: 171 NGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNAD-SQHPSLFGAMPLGYVP 229

Query: 167 PYNGYGYQAAGSYGLMQYRLPPGQNQPSFPNVIPHANQGNVFRGGTP--------RSYSV 12
           PYNGYGYQA GSYGLMQY LPP QNQ  FPN+IP  NQGN  RG  P        R+Y++
Sbjct: 230 PYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAM 289

Query: 11  PAA 3
           P A
Sbjct: 290 PPA 292


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