BLASTX nr result

ID: Atractylodes22_contig00000575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000575
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9M3V8.1|RS6_ASPOF RecName: Full=40S ribosomal protein S6 gi|...   372   e-101
ref|XP_002531669.1| 40S ribosomal protein S6, putative [Ricinus ...   369   e-100
ref|XP_002306298.1| predicted protein [Populus trichocarpa] gi|1...   369   e-100
gb|ABA40470.1| ribosomal protein S6-like protein [Solanum tubero...   368   1e-99
ref|XP_002513953.1| 40S ribosomal protein S6, putative [Ricinus ...   367   2e-99

>sp|Q9M3V8.1|RS6_ASPOF RecName: Full=40S ribosomal protein S6 gi|7649387|emb|CAB89081.1|
           S6 ribosomal protein [Asparagus officinalis]
          Length = 251

 Score =  372 bits (954), Expect = e-101
 Identities = 193/239 (80%), Positives = 196/239 (82%)
 Frame = +3

Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 230
           MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 231 FPMKQGVLTPGRVRLLLVRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVLNLVIVKKGD 410
           FPMKQGVLTPGRVRLLL RGTPCF                 CIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 411 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKAGKECSKAPKI 590
           NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNK GK CSKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180

Query: 591 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQREKRSESLAKKRSRL 767
           QRLVTPLTLQ                      YQKLLASRLKEQR++RSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSRL 239


>ref|XP_002531669.1| 40S ribosomal protein S6, putative [Ricinus communis]
           gi|223528700|gb|EEF30713.1| 40S ribosomal protein S6,
           putative [Ricinus communis]
          Length = 247

 Score =  369 bits (947), Expect = e-100
 Identities = 192/239 (80%), Positives = 197/239 (82%)
 Frame = +3

Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 230
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGDALGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 231 FPMKQGVLTPGRVRLLLVRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVLNLVIVKKGD 410
           FPMKQGVLTPGRVRLLL RGTPCF                 CIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 411 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKAGKECSKAPKI 590
           NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT K+GK+ SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 591 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQREKRSESLAKKRSRL 767
           QRLVTPLTLQ                      YQKLLASRLKEQRE+RSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKAKAEAAEYQKLLASRLKEQRERRSESLAKKRSRL 239


>ref|XP_002306298.1| predicted protein [Populus trichocarpa] gi|118485704|gb|ABK94702.1|
           unknown [Populus trichocarpa]
           gi|222855747|gb|EEE93294.1| predicted protein [Populus
           trichocarpa]
          Length = 249

 Score =  369 bits (946), Expect = e-100
 Identities = 191/239 (79%), Positives = 197/239 (82%)
 Frame = +3

Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 230
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGDALGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 231 FPMKQGVLTPGRVRLLLVRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVLNLVIVKKGD 410
           FPMKQGVLTPGRVRLLL RGTPCF                 CIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 411 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKAGKECSKAPKI 590
           NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT K+GK+ SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 591 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQREKRSESLAKKRSRL 767
           QRLVTPLTLQ                      YQKLLA+RLKEQRE+RSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARISDKKKRISKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRL 239


>gb|ABA40470.1| ribosomal protein S6-like protein [Solanum tuberosum]
          Length = 249

 Score =  368 bits (944), Expect = 1e-99
 Identities = 191/239 (79%), Positives = 194/239 (81%)
 Frame = +3

Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 230
           MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 231 FPMKQGVLTPGRVRLLLVRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVLNLVIVKKGD 410
           FPMKQGVLTPGRVRLLL RGTPCF                 CIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLYRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 411 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKAGKECSKAPKI 590
           NDLPGLTD EKPRMRGPKRASKIRKLFNL K+DDVRKYVNTYRRTFTNK GKE SKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLGKDDDVRKYVNTYRRTFTNKKGKEVSKAPKI 180

Query: 591 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQREKRSESLAKKRSRL 767
           QRLVTPLTLQ                      YQKLLASRLKEQRE+RSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKAKSEAADYQKLLASRLKEQRERRSESLAKKRSRL 239


>ref|XP_002513953.1| 40S ribosomal protein S6, putative [Ricinus communis]
           gi|223547039|gb|EEF48536.1| 40S ribosomal protein S6,
           putative [Ricinus communis]
          Length = 249

 Score =  367 bits (943), Expect = 2e-99
 Identities = 191/239 (79%), Positives = 196/239 (82%)
 Frame = +3

Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 230
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGDALGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 231 FPMKQGVLTPGRVRLLLVRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVLNLVIVKKGD 410
           FPMKQGVLTPGRVRLLL RGTPCF                 CIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 411 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKAGKECSKAPKI 590
           NDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FT K+GK+ SKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 591 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQREKRSESLAKKRSRL 767
           QRLVTPLTLQ                      YQKLLASRLKEQRE+RSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKAKAEAAEYQKLLASRLKEQRERRSESLAKKRSRL 239


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