BLASTX nr result

ID: Atractylodes22_contig00000573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000573
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH56591.1| polyprotein [Navel orange infectious mottling vi...   225   4e-57
ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus]             221   7e-56
ref|NP_620566.1| polyprotein [Satsuma dwarf virus] gi|81979373|s...   221   7e-56
dbj|BAH56589.1| polyprotein [Citrus mosaic sadwavirus]                220   2e-55
ref|NP_733976.1| movement protein [Satsuma dwarf virus]               219   3e-55

>dbj|BAH56591.1| polyprotein [Navel orange infectious mottling virus]
          Length = 1576

 Score =  225 bits (574), Expect = 4e-57
 Identities = 110/133 (82%), Positives = 117/133 (87%)
 Frame = +3

Query: 195 FQDTESWKNSAFAACRGCKTYPIEEVGANGSVTIREVPVGLVLKGVMAQYRSLLWTQFVA 374
           FQDTESWKNSAFAACRGCKTYPIEEVGA+G VT+REVPVGL+LKGVMAQYRSLLWTQFVA
Sbjct: 11  FQDTESWKNSAFAACRGCKTYPIEEVGADGLVTVREVPVGLMLKGVMAQYRSLLWTQFVA 70

Query: 375 DSATTTVDRKSFDFWLFCRRAEAATLRAFEXXXXXXXXXXXXLNAEGVIDRSFKGRTYKV 554
           DSATTTVDRKSFDFWLFCRRAE A LRAFE            L+AEG+IDRS+KGR+YKV
Sbjct: 71  DSATTTVDRKSFDFWLFCRRAEVAALRAFEARKKKRAAKAAALDAEGIIDRSYKGRSYKV 130

Query: 555 STRGLSWKSVRAA 593
           STRGLSWKSVR A
Sbjct: 131 STRGLSWKSVRDA 143


>ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus]
          Length = 1190

 Score =  221 bits (563), Expect = 7e-56
 Identities = 109/133 (81%), Positives = 115/133 (86%)
 Frame = +3

Query: 195 FQDTESWKNSAFAACRGCKTYPIEEVGANGSVTIREVPVGLVLKGVMAQYRSLLWTQFVA 374
           FQDTESWKNSAFAACRGCKTYPIEEVG +GSV IRE+PVGLVLKGVMAQYRS+LWTQFVA
Sbjct: 11  FQDTESWKNSAFAACRGCKTYPIEEVGTDGSVRIRELPVGLVLKGVMAQYRSILWTQFVA 70

Query: 375 DSATTTVDRKSFDFWLFCRRAEAATLRAFEXXXXXXXXXXXXLNAEGVIDRSFKGRTYKV 554
           D ATTTVDRKSFDFWLFCRRAEAA  RAF             L+AEG+IDRS+KGRTYKV
Sbjct: 71  DPATTTVDRKSFDFWLFCRRAEAAQERAFRARQSKRAAKAAALDAEGLIDRSYKGRTYKV 130

Query: 555 STRGLSWKSVRAA 593
           STRGLSWKSVRAA
Sbjct: 131 STRGLSWKSVRAA 143


>ref|NP_620566.1| polyprotein [Satsuma dwarf virus]
           gi|81979373|sp|Q9WAL8.1|POL1_SDVS5 RecName: Full=RNA1
           polyprotein; AltName: Full=P1; Contains: RecName:
           Full=Putative helicase; AltName: Full=Putative
           NTP-binding protein; Contains: RecName: Full=Probable
           picornain 3C-like protease; Short=3C-like protease;
           Contains: RecName: Full=Probable RNA-directed RNA
           polymerase gi|4589400|dbj|BAA76746.1| polyprotein
           [Satsuma dwarf virus]
          Length = 2081

 Score =  221 bits (563), Expect = 7e-56
 Identities = 109/133 (81%), Positives = 115/133 (86%)
 Frame = +3

Query: 195 FQDTESWKNSAFAACRGCKTYPIEEVGANGSVTIREVPVGLVLKGVMAQYRSLLWTQFVA 374
           FQDTESWKNSAFAACRGCKTYPIEEVG +GSV IRE+PVGLVLKGVMAQYRS+LWTQFVA
Sbjct: 11  FQDTESWKNSAFAACRGCKTYPIEEVGTDGSVRIRELPVGLVLKGVMAQYRSILWTQFVA 70

Query: 375 DSATTTVDRKSFDFWLFCRRAEAATLRAFEXXXXXXXXXXXXLNAEGVIDRSFKGRTYKV 554
           D ATTTVDRKSFDFWLFCRRAEAA  RAF             L+AEG+IDRS+KGRTYKV
Sbjct: 71  DPATTTVDRKSFDFWLFCRRAEAAQERAFRARQSKRAAKAAALDAEGLIDRSYKGRTYKV 130

Query: 555 STRGLSWKSVRAA 593
           STRGLSWKSVRAA
Sbjct: 131 STRGLSWKSVRAA 143


>dbj|BAH56589.1| polyprotein [Citrus mosaic sadwavirus]
          Length = 1574

 Score =  220 bits (560), Expect = 2e-55
 Identities = 107/133 (80%), Positives = 115/133 (86%)
 Frame = +3

Query: 195 FQDTESWKNSAFAACRGCKTYPIEEVGANGSVTIREVPVGLVLKGVMAQYRSLLWTQFVA 374
           FQDTESWKNSAFAACRGCKTYPIEEVGA+G VT+REVPVGLVLKGVMAQYRSL+WTQFVA
Sbjct: 11  FQDTESWKNSAFAACRGCKTYPIEEVGADGLVTVREVPVGLVLKGVMAQYRSLMWTQFVA 70

Query: 375 DSATTTVDRKSFDFWLFCRRAEAATLRAFEXXXXXXXXXXXXLNAEGVIDRSFKGRTYKV 554
           D+AT T DRKSFDFWL+CRRAE A LRAFE            L+AEG+IDRS+KGRTYKV
Sbjct: 71  DAATITHDRKSFDFWLYCRRAEVADLRAFEARKKKRAAKAAALSAEGIIDRSYKGRTYKV 130

Query: 555 STRGLSWKSVRAA 593
           S RGLSWKSVRAA
Sbjct: 131 SVRGLSWKSVRAA 143


>ref|NP_733976.1| movement protein [Satsuma dwarf virus]
          Length = 913

 Score =  219 bits (558), Expect = 3e-55
 Identities = 108/133 (81%), Positives = 114/133 (85%)
 Frame = +3

Query: 195 FQDTESWKNSAFAACRGCKTYPIEEVGANGSVTIREVPVGLVLKGVMAQYRSLLWTQFVA 374
           FQDTESWKNSAFAACRGCKTYPIEEVG +GSV IRE+PVGLVLKGVMAQYRS+LWTQFVA
Sbjct: 11  FQDTESWKNSAFAACRGCKTYPIEEVGTDGSVRIRELPVGLVLKGVMAQYRSILWTQFVA 70

Query: 375 DSATTTVDRKSFDFWLFCRRAEAATLRAFEXXXXXXXXXXXXLNAEGVIDRSFKGRTYKV 554
           D ATTTVDRKSFDFWLFCRRAEAA  RAF             L+AEG+IDRS+KGRTYKV
Sbjct: 71  DPATTTVDRKSFDFWLFCRRAEAAQERAFRARQSKRAAKAAALDAEGLIDRSYKGRTYKV 130

Query: 555 STRGLSWKSVRAA 593
           S RGLSWKSVRAA
Sbjct: 131 SVRGLSWKSVRAA 143


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