BLASTX nr result

ID: Atractylodes22_contig00000562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000562
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331857.1| predicted protein [Populus trichocarpa] gi|2...   207   5e-52
ref|XP_002272873.1| PREDICTED: 60S ribosomal protein L32-1 [Viti...   206   2e-51
ref|XP_002303076.1| predicted protein [Populus trichocarpa] gi|2...   205   4e-51
gb|ADR71279.1| 60S ribosomal protein L32A [Hevea brasiliensis] g...   204   5e-51
gb|AFK45640.1| unknown [Lotus japonicus]                              204   5e-51

>ref|XP_002331857.1| predicted protein [Populus trichocarpa]
           gi|224132224|ref|XP_002321286.1| predicted protein
           [Populus trichocarpa] gi|118483614|gb|ABK93702.1|
           unknown [Populus trichocarpa]
           gi|118484494|gb|ABK94122.1| unknown [Populus
           trichocarpa] gi|222862059|gb|EEE99601.1| predicted
           protein [Populus trichocarpa]
           gi|222875375|gb|EEF12506.1| predicted protein [Populus
           trichocarpa]
          Length = 133

 Score =  207 bits (528), Expect = 5e-52
 Identities = 101/108 (93%), Positives = 102/108 (94%)
 Frame = +1

Query: 1   VKKRVKKFKRPHSDWKICVKENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPN 180
           VKKRVKKFKRP SD KI VK NWRRPKGIDSRVRRKFKG TLMPNIGYGSDKKTRHYLPN
Sbjct: 11  VKKRVKKFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPN 70

Query: 181 GFKKFVVHNAKELEVLMMHNRTYCAEIAHNVSTRKRKEIVERASQLDV 324
           GFKKFVVHN KELEVLMMHNRTYCAEIAHNVSTRKRKEIVERA+QLDV
Sbjct: 71  GFKKFVVHNVKELEVLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDV 118


>ref|XP_002272873.1| PREDICTED: 60S ribosomal protein L32-1 [Vitis vinifera]
           gi|147815192|emb|CAN74433.1| hypothetical protein
           VITISV_040276 [Vitis vinifera]
           gi|297740628|emb|CBI30810.3| unnamed protein product
           [Vitis vinifera]
          Length = 133

 Score =  206 bits (524), Expect = 2e-51
 Identities = 99/108 (91%), Positives = 103/108 (95%)
 Frame = +1

Query: 1   VKKRVKKFKRPHSDWKICVKENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPN 180
           VKKRVKKFKRP SD K+ VK NWRRPKGIDSRVRRKFKG TLMPNIGYGSDKKTRHYLPN
Sbjct: 11  VKKRVKKFKRPQSDRKVSVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPN 70

Query: 181 GFKKFVVHNAKELEVLMMHNRTYCAEIAHNVSTRKRKEIVERASQLDV 324
           GFKKFVVHNA+ELE+LMMHNRTYCAEIAHNVSTRKRKEIVERA+QLDV
Sbjct: 71  GFKKFVVHNAQELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDV 118


>ref|XP_002303076.1| predicted protein [Populus trichocarpa] gi|222844802|gb|EEE82349.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  205 bits (521), Expect = 4e-51
 Identities = 100/108 (92%), Positives = 101/108 (93%)
 Frame = +1

Query: 1   VKKRVKKFKRPHSDWKICVKENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPN 180
           VKKRVKKFKRP SD KI VK NWRRPKGIDSRVRRKFKG TLMPNIGYGSDKKTRHYLPN
Sbjct: 11  VKKRVKKFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPN 70

Query: 181 GFKKFVVHNAKELEVLMMHNRTYCAEIAHNVSTRKRKEIVERASQLDV 324
           GFKKFVVHN  ELEVLMMHNRTYCAEIAHNVSTRKRKEIVERA+QLDV
Sbjct: 71  GFKKFVVHNVGELEVLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDV 118


>gb|ADR71279.1| 60S ribosomal protein L32A [Hevea brasiliensis]
           gi|313586539|gb|ADR71280.1| 60S ribosomal protein L32B
           [Hevea brasiliensis]
          Length = 133

 Score =  204 bits (520), Expect = 5e-51
 Identities = 99/108 (91%), Positives = 102/108 (94%)
 Frame = +1

Query: 1   VKKRVKKFKRPHSDWKICVKENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPN 180
           VKKRVKKFKRP SD KI VK NWRRPKGIDSRVRRKFKG TLMPNIGYGSDKKTRHYLPN
Sbjct: 11  VKKRVKKFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPN 70

Query: 181 GFKKFVVHNAKELEVLMMHNRTYCAEIAHNVSTRKRKEIVERASQLDV 324
           GFKKFVVHN KELE+LMMHNRTYCAEIAH+VSTRKRKEIVERA+QLDV
Sbjct: 71  GFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDV 118


>gb|AFK45640.1| unknown [Lotus japonicus]
          Length = 133

 Score =  204 bits (520), Expect = 5e-51
 Identities = 96/108 (88%), Positives = 104/108 (96%)
 Frame = +1

Query: 1   VKKRVKKFKRPHSDWKICVKENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPN 180
           +KKRVK+F RP SD KICVK++WRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPN
Sbjct: 11  IKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPN 70

Query: 181 GFKKFVVHNAKELEVLMMHNRTYCAEIAHNVSTRKRKEIVERASQLDV 324
           GFKKFVVHN K+LE+LMMHNRTYCAEIAHNVSTRKRK+IVERA+QLDV
Sbjct: 71  GFKKFVVHNVKDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDV 118


Top