BLASTX nr result

ID: Atractylodes22_contig00000561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000561
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331857.1| predicted protein [Populus trichocarpa] gi|2...   177   4e-54
gb|AFK42243.1| unknown [Medicago truncatula]                          177   1e-53
gb|AFK45640.1| unknown [Lotus japonicus]                              179   1e-53
gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa]                176   1e-53
ref|XP_002272873.1| PREDICTED: 60S ribosomal protein L32-1 [Viti...   176   1e-53

>ref|XP_002331857.1| predicted protein [Populus trichocarpa]
           gi|224132224|ref|XP_002321286.1| predicted protein
           [Populus trichocarpa] gi|118483614|gb|ABK93702.1|
           unknown [Populus trichocarpa]
           gi|118484494|gb|ABK94122.1| unknown [Populus
           trichocarpa] gi|222862059|gb|EEE99601.1| predicted
           protein [Populus trichocarpa]
           gi|222875375|gb|EEF12506.1| predicted protein [Populus
           trichocarpa]
          Length = 133

 Score =  177 bits (450), Expect(2) = 4e-54
 Identities = 85/91 (93%), Positives = 85/91 (93%)
 Frame = +1

Query: 46  RPHSDWKICVKENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHN 225
           RP SD KI VK NWRRPKGIDSRVRRKFKG TLMPNIGYGSDKKTRHYLPNGFKKFVVHN
Sbjct: 20  RPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHN 79

Query: 226 AKELEVLMMHNRTYCAEIAHNVSTRKRKEIV 318
            KELEVLMMHNRTYCAEIAHNVSTRKRKEIV
Sbjct: 80  VKELEVLMMHNRTYCAEIAHNVSTRKRKEIV 110



 Score = 58.9 bits (141), Expect(2) = 4e-54
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 395 RKRKEIVERAAQLDVVVTNKLARLRSQEDE 484
           RKRKEIVERAAQLDVVVTNKLARLRSQEDE
Sbjct: 104 RKRKEIVERAAQLDVVVTNKLARLRSQEDE 133


>gb|AFK42243.1| unknown [Medicago truncatula]
          Length = 133

 Score =  177 bits (450), Expect(2) = 1e-53
 Identities = 82/91 (90%), Positives = 88/91 (96%)
 Frame = +1

Query: 46  RPHSDWKICVKENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHN 225
           RP SD KICVK++WRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHN
Sbjct: 20  RPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHN 79

Query: 226 AKELEVLMMHNRTYCAEIAHNVSTRKRKEIV 318
            ++LE+LMMHNRTYCAEIAHNVSTRKRK+IV
Sbjct: 80  VQDLELLMMHNRTYCAEIAHNVSTRKRKDIV 110



 Score = 57.8 bits (138), Expect(2) = 1e-53
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +2

Query: 395 RKRKEIVERAAQLDVVVTNKLARLRSQEDE 484
           RKRK+IVERAAQLDVVVTNKLARLRSQEDE
Sbjct: 104 RKRKDIVERAAQLDVVVTNKLARLRSQEDE 133


>gb|AFK45640.1| unknown [Lotus japonicus]
          Length = 133

 Score =  179 bits (454), Expect(2) = 1e-53
 Identities = 83/91 (91%), Positives = 88/91 (96%)
 Frame = +1

Query: 46  RPHSDWKICVKENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHN 225
           RP SD KICVK++WRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHN
Sbjct: 20  RPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHN 79

Query: 226 AKELEVLMMHNRTYCAEIAHNVSTRKRKEIV 318
            K+LE+LMMHNRTYCAEIAHNVSTRKRK+IV
Sbjct: 80  VKDLELLMMHNRTYCAEIAHNVSTRKRKDIV 110



 Score = 55.8 bits (133), Expect(2) = 1e-53
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +2

Query: 395 RKRKEIVERAAQLDVVVTNKLARLRSQEDE 484
           RKRK+IVERAAQLDVVVTNK ARLRSQEDE
Sbjct: 104 RKRKDIVERAAQLDVVVTNKTARLRSQEDE 133


>gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa]
          Length = 133

 Score =  176 bits (446), Expect(2) = 1e-53
 Identities = 82/91 (90%), Positives = 87/91 (95%)
 Frame = +1

Query: 46  RPHSDWKICVKENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHN 225
           RP S  KICVK++WRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHN
Sbjct: 20  RPQSGRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHN 79

Query: 226 AKELEVLMMHNRTYCAEIAHNVSTRKRKEIV 318
            ++LE+LMMHNRTYCAEIAHNVSTRKRKEIV
Sbjct: 80  VQDLELLMMHNRTYCAEIAHNVSTRKRKEIV 110



 Score = 58.9 bits (141), Expect(2) = 1e-53
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 395 RKRKEIVERAAQLDVVVTNKLARLRSQEDE 484
           RKRKEIVERAAQLDVVVTNKLARLRSQEDE
Sbjct: 104 RKRKEIVERAAQLDVVVTNKLARLRSQEDE 133


>ref|XP_002272873.1| PREDICTED: 60S ribosomal protein L32-1 [Vitis vinifera]
           gi|147815192|emb|CAN74433.1| hypothetical protein
           VITISV_040276 [Vitis vinifera]
           gi|297740628|emb|CBI30810.3| unnamed protein product
           [Vitis vinifera]
          Length = 133

 Score =  176 bits (446), Expect(2) = 1e-53
 Identities = 83/91 (91%), Positives = 86/91 (94%)
 Frame = +1

Query: 46  RPHSDWKICVKENWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHN 225
           RP SD K+ VK NWRRPKGIDSRVRRKFKG TLMPNIGYGSDKKTRHYLPNGFKKFVVHN
Sbjct: 20  RPQSDRKVSVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHN 79

Query: 226 AKELEVLMMHNRTYCAEIAHNVSTRKRKEIV 318
           A+ELE+LMMHNRTYCAEIAHNVSTRKRKEIV
Sbjct: 80  AQELELLMMHNRTYCAEIAHNVSTRKRKEIV 110



 Score = 58.9 bits (141), Expect(2) = 1e-53
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 395 RKRKEIVERAAQLDVVVTNKLARLRSQEDE 484
           RKRKEIVERAAQLDVVVTNKLARLRSQEDE
Sbjct: 104 RKRKEIVERAAQLDVVVTNKLARLRSQEDE 133


Top