BLASTX nr result

ID: Atractylodes22_contig00000546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000546
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    50   6e-08
ref|XP_002299194.1| predicted protein [Populus trichocarpa] gi|2...    42   6e-07
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    41   1e-06
gb|ACY69610.1| TIR-NBS-LRR resistance-like protein RGC151 [Helia...    39   1e-06
ref|XP_003520332.1| PREDICTED: TMV resistance protein N-like [Gl...    41   2e-06

>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223548234|gb|EEF49725.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 50.4 bits (119), Expect(2) = 6e-08
 Identities = 25/41 (60%), Positives = 28/41 (68%)
 Frame = +1

Query: 4   SYKSLPYDSEKELFLHIACFFIGKDMDYVAKILEHDYCALW 126
           SY SL  D  K LFLHIACFF G+D DYV K+L  D C L+
Sbjct: 422 SYDSLQDDKYKNLFLHIACFFTGRDKDYVVKVL--DGCELY 460



 Score = 31.2 bits (69), Expect(2) = 6e-08
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +2

Query: 125 GIETLTNRCLLSVSPNKKLMMHRLLQEM 208
           GI+ L +R L++++ + KLMMH LL++M
Sbjct: 464 GIQNLIDRHLVTINKDNKLMMHPLLRDM 491


>ref|XP_002299194.1| predicted protein [Populus trichocarpa] gi|222846452|gb|EEE83999.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score = 41.6 bits (96), Expect(2) = 6e-07
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +1

Query: 25  DSEKELFLHIACFFIGKDMDYVAKILE 105
           + +K LFL IACFFIG D DYV +ILE
Sbjct: 2   ERDKNLFLDIACFFIGNDKDYVRRILE 28



 Score = 36.6 bits (83), Expect(2) = 6e-07
 Identities = 14/28 (50%), Positives = 23/28 (82%)
 Frame = +2

Query: 125 GIETLTNRCLLSVSPNKKLMMHRLLQEM 208
           GI+ L +RCL+++  + KLMMH+LL++M
Sbjct: 37  GIQKLIDRCLITIDKDNKLMMHQLLRDM 64


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
           gi|223543328|gb|EEF44860.1| TMV resistance protein N,
           putative [Ricinus communis]
          Length = 1186

 Score = 41.2 bits (95), Expect(2) = 1e-06
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +1

Query: 4   SYKSLPYDSEKELFLHIACFFIGKDMDYVAKILE 105
           S+ SL  D +K LFL IACFF G D+ YV +IL+
Sbjct: 432 SFDSLQDDHDKRLFLDIACFFTGMDIGYVFRILD 465



 Score = 36.2 bits (82), Expect(2) = 1e-06
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +2

Query: 125 GIETLTNRCLLSVSPNKKLMMHRLLQEM 208
           GI+ L +RCL+++S   KLMMH+LL +M
Sbjct: 474 GIQNLIDRCLITISDKYKLMMHQLLGDM 501


>gb|ACY69610.1| TIR-NBS-LRR resistance-like protein RGC151 [Helianthus annuus]
          Length = 1021

 Score = 39.3 bits (90), Expect(2) = 1e-06
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +2

Query: 125 GIETLTNRCLLSVSPNKKLMMHRLLQEM 208
           GI+ L NRCLL+V  + +LMMH+LLQ+M
Sbjct: 488 GIKVLVNRCLLTVGSSGELMMHQLLQDM 515



 Score = 38.1 bits (87), Expect(2) = 1e-06
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +1

Query: 4   SYKSLPYDSEKELFLHIACFFIGKDMDYVAKILE 105
           SY +LP + +KELF +IAC F+G++  +   IL+
Sbjct: 446 SYDTLPSEKDKELFKYIACLFVGEERKFTEDILK 479


>ref|XP_003520332.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1047

 Score = 41.2 bits (95), Expect(2) = 2e-06
 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
 Frame = +1

Query: 4   SYKSLPYDSEKELFLHIACFFIGKDMDYVAKILE----HDYCAL 123
           S+  L  + EK++FL + CFFIGKD+ YV +IL     H  C +
Sbjct: 432 SFDGLNDEKEKDIFLDVCCFFIGKDIAYVTEILNGCGLHSDCGI 475



 Score = 35.4 bits (80), Expect(2) = 2e-06
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = +2

Query: 122 CGIETLTNRCLLSVSPNKKLMMHRLLQEM 208
           CGI  L +R L+ V  N KL MH L+QEM
Sbjct: 473 CGIPVLIDRSLIKVEKNNKLGMHNLVQEM 501


Top