BLASTX nr result

ID: Atractylodes22_contig00000538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000538
         (2080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81424.1| hypothetical protein VITISV_035944 [Vitis vinifera]    48   2e-06
ref|XP_002284970.2| PREDICTED: uncharacterized protein LOC100267...    46   5e-06

>emb|CAN81424.1| hypothetical protein VITISV_035944 [Vitis vinifera]
          Length = 401

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 40/143 (27%), Positives = 56/143 (39%), Gaps = 50/143 (34%)
 Frame = -3

Query: 980 KKDSGDKKNWLSSTQLWNTN-----ENVGQKANATVQPTKKKAEEED------------- 855
           +KD  DKKNW+SS QLWN++     +++  K   +    K++ +EE+             
Sbjct: 111 EKDCKDKKNWMSSVQLWNSDDSASTDHIYDKKQDSKLEIKQRVDEENRPATEDPFQPCKS 170

Query: 854 --AGRAF-----------------------------CSPGIKNPMRGNGLLTEINVASRL 768
              GRAF                              +PGIKNP   +G        SR 
Sbjct: 171 RTGGRAFLPFKGYSGFPVATARKEDKDELPVHGLSLLTPGIKNPREESGSSGSKTSCSRG 230

Query: 767 IPCSIPNVQSG-GIVPTPPHQQT 702
           +  S PN+Q      P PP QQT
Sbjct: 231 VSSSAPNLQPNLRTGPQPPQQQT 253



 Score = 32.3 bits (72), Expect(2) = 2e-06
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -2

Query: 1104 AIVALKEESTVLKKSSNAEPVLA*FIPLK 1018
            AI+ALKEE  +  K+SN +PVL  FIPLK
Sbjct: 72   AILALKEE-LLRSKASNVQPVLEEFIPLK 99


>ref|XP_002284970.2| PREDICTED: uncharacterized protein LOC100267475 [Vitis vinifera]
           gi|297741334|emb|CBI32465.3| unnamed protein product
           [Vitis vinifera]
          Length = 401

 Score = 46.2 bits (108), Expect(2) = 5e-06
 Identities = 39/143 (27%), Positives = 56/143 (39%), Gaps = 50/143 (34%)
 Frame = -3

Query: 980 KKDSGDKKNWLSSTQLWNTN-----ENVGQKANATVQPTKKKAEEED------------- 855
           +K+  DKKNW+SS QLWN++     +++  K   +    K++ +EE+             
Sbjct: 111 EKECKDKKNWMSSVQLWNSDDSASTDHIYDKKQDSKLEIKQRVDEENRPATEDPFQPCKS 170

Query: 854 --AGRAF-----------------------------CSPGIKNPMRGNGLLTEINVASRL 768
              GRAF                              +PGIKNP   +G        SR 
Sbjct: 171 RTGGRAFLPFKGYSGFPVATARKEDKDELPVHGLSLLTPGIKNPREESGSSGSKTSCSRG 230

Query: 767 IPCSIPNVQSG-GIVPTPPHQQT 702
           +  S PN+Q      P PP QQT
Sbjct: 231 VSSSAPNLQPNLRTGPQPPQQQT 253



 Score = 32.3 bits (72), Expect(2) = 5e-06
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -2

Query: 1104 AIVALKEESTVLKKSSNAEPVLA*FIPLK 1018
            AI+ALKEE  +  K+SN +PVL  FIPLK
Sbjct: 72   AILALKEE-LLRSKASNVQPVLEEFIPLK 99


Top