BLASTX nr result

ID: Atractylodes22_contig00000517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000517
         (1657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ89702.1| predicted protein [Hordeum vulgare subsp. vulgare]     66   2e-08
ref|XP_002454168.1| hypothetical protein SORBIDRAFT_04g025870 [S...    64   9e-08
gb|ACF06578.1| 40S ribosomal protein S11 [Elaeis guineensis]           64   2e-07
ref|XP_004144894.1| PREDICTED: 40S ribosomal protein S11-3-like ...    63   2e-07
tpg|DAA37074.1| TPA: 40S ribosomal protein S11 [Zea mays]              63   2e-07

>dbj|BAJ89702.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 161

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 36/63 (57%), Positives = 37/63 (58%)
 Frame = -3

Query: 1655 EKAFLKQPKVFLCSXXXXXXXXXXXXGNRFWKSGNSFWKSVALGFKTPSEAIEGIKQHSN 1476
            EKAFLKQPKVFLCS             N+  K GN FWKSV LGFKTP EAIEG      
Sbjct: 6    EKAFLKQPKVFLCSKKATKGN------NKPGKEGNRFWKSVGLGFKTPKEAIEGTYIDKK 59

Query: 1475 CNF 1467
            C F
Sbjct: 60   CPF 62


>ref|XP_002454168.1| hypothetical protein SORBIDRAFT_04g025870 [Sorghum bicolor]
            gi|242076386|ref|XP_002448129.1| hypothetical protein
            SORBIDRAFT_06g021750 [Sorghum bicolor]
            gi|241933999|gb|EES07144.1| hypothetical protein
            SORBIDRAFT_04g025870 [Sorghum bicolor]
            gi|241939312|gb|EES12457.1| hypothetical protein
            SORBIDRAFT_06g021750 [Sorghum bicolor]
          Length = 160

 Score = 64.3 bits (155), Expect = 9e-08
 Identities = 34/63 (53%), Positives = 37/63 (58%)
 Frame = -3

Query: 1655 EKAFLKQPKVFLCSXXXXXXXXXXXXGNRFWKSGNSFWKSVALGFKTPSEAIEGIKQHSN 1476
            EKAFLKQPKVFLCS             N+  K GN FWK++ LGFKTP EAIEG      
Sbjct: 6    EKAFLKQPKVFLCSKKAAKG-------NKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKK 58

Query: 1475 CNF 1467
            C F
Sbjct: 59   CPF 61


>gb|ACF06578.1| 40S ribosomal protein S11 [Elaeis guineensis]
          Length = 163

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 34/63 (53%), Positives = 36/63 (57%)
 Frame = -3

Query: 1655 EKAFLKQPKVFLCSXXXXXXXXXXXXGNRFWKSGNSFWKSVALGFKTPSEAIEGIKQHSN 1476
            E+AFLKQPKVFLCS              R  K GN FWKS+ LGFKTP EAIEG      
Sbjct: 6    ERAFLKQPKVFLCSKKSGKG-------KRPGKGGNRFWKSIGLGFKTPREAIEGAYVDKK 58

Query: 1475 CNF 1467
            C F
Sbjct: 59   CPF 61


>ref|XP_004144894.1| PREDICTED: 40S ribosomal protein S11-3-like [Cucumis sativus]
            gi|449471994|ref|XP_004153463.1| PREDICTED: 40S ribosomal
            protein S11-3-like [Cucumis sativus]
            gi|449522568|ref|XP_004168298.1| PREDICTED: 40S ribosomal
            protein S11-3-like [Cucumis sativus]
          Length = 159

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 33/63 (52%), Positives = 37/63 (58%)
 Frame = -3

Query: 1655 EKAFLKQPKVFLCSXXXXXXXXXXXXGNRFWKSGNSFWKSVALGFKTPSEAIEGIKQHSN 1476
            EKAFLKQPKVFLCS             N+  K GN FWK++ LGFKTP +AIEG      
Sbjct: 6    EKAFLKQPKVFLCSKKTAKG-------NKPGKGGNRFWKNIGLGFKTPRDAIEGTYIDKK 58

Query: 1475 CNF 1467
            C F
Sbjct: 59   CPF 61


>tpg|DAA37074.1| TPA: 40S ribosomal protein S11 [Zea mays]
          Length = 571

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 33/63 (52%), Positives = 37/63 (58%)
 Frame = -3

Query: 1655 EKAFLKQPKVFLCSXXXXXXXXXXXXGNRFWKSGNSFWKSVALGFKTPSEAIEGIKQHSN 1476
            E+AFLKQPKVFLCS             N+  K GN FWK++ LGFKTP EAIEG      
Sbjct: 417  ERAFLKQPKVFLCSKKATKV-------NKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKK 469

Query: 1475 CNF 1467
            C F
Sbjct: 470  CPF 472


Top