BLASTX nr result

ID: Atractylodes22_contig00000466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000466
         (931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein...   520   e-145
dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein...   504   e-140
gb|AAA80593.1| chlorophyll a/b binding protein [Solanum tuberosum]    503   e-140
dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein...   503   e-140
dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein...   503   e-140

>dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein (LHCP) precursor
           [Lactuca sativa]
          Length = 266

 Score =  520 bits (1339), Expect = e-145
 Identities = 253/266 (95%), Positives = 258/266 (96%), Gaps = 1/266 (0%)
 Frame = -2

Query: 903 MAASTMALSSSFVGQAVKVAPSGSEIIGNGRVSMRKTAV-KKVAPSGSPWYGPDRVKYLG 727
           MAASTMALSS F GQAVK +PS SE+ GNGRVSMRKTA  KK APSGSPWYGPDRVKYLG
Sbjct: 1   MAASTMALSSPFAGQAVKTSPSSSELFGNGRVSMRKTAAAKKAAPSGSPWYGPDRVKYLG 60

Query: 726 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 547
           PFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61  PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLA 120

Query: 546 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGG 367
           RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWATQVILMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 180

Query: 366 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 187
           PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 186 ENLADHLADPVANNAWSYATNFVPGK 109
           ENLADHLADPVANNAWSYATNFVPGK
Sbjct: 241 ENLADHLADPVANNAWSYATNFVPGK 266


>dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  504 bits (1298), Expect = e-140
 Identities = 248/266 (93%), Positives = 255/266 (95%), Gaps = 1/266 (0%)
 Frame = -2

Query: 903 MAASTMALSS-SFVGQAVKVAPSGSEIIGNGRVSMRKTAVKKVAPSGSPWYGPDRVKYLG 727
           MAASTMALSS SF GQAVK++PS SEI GNGRVSMRKT  K VA S SPWYGPDRVKYLG
Sbjct: 1   MAASTMALSSPSFAGQAVKLSPSASEITGNGRVSMRKTVAKPVA-SSSPWYGPDRVKYLG 59

Query: 726 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 547
           PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 60  PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 119

Query: 546 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGG 367
           RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVILMGAVEGYR+AGG
Sbjct: 120 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 179

Query: 366 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 187
           PLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 180 PLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239

Query: 186 ENLADHLADPVANNAWSYATNFVPGK 109
           ENLADHLADPV NNAW+YATNFVPGK
Sbjct: 240 ENLADHLADPVNNNAWAYATNFVPGK 265


>gb|AAA80593.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 265

 Score =  503 bits (1296), Expect = e-140
 Identities = 246/266 (92%), Positives = 256/266 (96%), Gaps = 1/266 (0%)
 Frame = -2

Query: 903 MAASTMALSS-SFVGQAVKVAPSGSEIIGNGRVSMRKTAVKKVAPSGSPWYGPDRVKYLG 727
           MAASTMALSS SF GQAVK++PS SEI GNGR++MRK AV K APS SPWYGPDRVKYLG
Sbjct: 1   MAASTMALSSPSFAGQAVKLSPSTSEITGNGRITMRK-AVAKSAPSSSPWYGPDRVKYLG 59

Query: 726 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 547
           PFSGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 60  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 119

Query: 546 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGG 367
           RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGG
Sbjct: 120 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 179

Query: 366 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 187
           PLGEV+DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 180 PLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239

Query: 186 ENLADHLADPVANNAWSYATNFVPGK 109
           ENLADHLADPV NNAW+YATNFVPGK
Sbjct: 240 ENLADHLADPVNNNAWAYATNFVPGK 265


>dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  503 bits (1296), Expect = e-140
 Identities = 248/266 (93%), Positives = 255/266 (95%), Gaps = 1/266 (0%)
 Frame = -2

Query: 903 MAASTMALSS-SFVGQAVKVAPSGSEIIGNGRVSMRKTAVKKVAPSGSPWYGPDRVKYLG 727
           MAA+TMALSS SF GQAVK++PS SEI GNGRVSMRKT  K VA S SPWYGPDRVKYLG
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEITGNGRVSMRKTVAKPVA-SSSPWYGPDRVKYLG 59

Query: 726 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 547
           PFSGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 60  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 119

Query: 546 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGG 367
           RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVILMGAVEGYR+AGG
Sbjct: 120 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRVAGG 179

Query: 366 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 187
           PLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 180 PLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239

Query: 186 ENLADHLADPVANNAWSYATNFVPGK 109
           ENLADHLADPV NNAWSYATNFVPGK
Sbjct: 240 ENLADHLADPVNNNAWSYATNFVPGK 265


>dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  503 bits (1295), Expect = e-140
 Identities = 248/266 (93%), Positives = 254/266 (95%), Gaps = 1/266 (0%)
 Frame = -2

Query: 903 MAASTMALSS-SFVGQAVKVAPSGSEIIGNGRVSMRKTAVKKVAPSGSPWYGPDRVKYLG 727
           MAASTMALSS SF GQAVK++PS  EI GNGRVSMRKT  K VA S SPWYGPDRVKYLG
Sbjct: 1   MAASTMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVA-SSSPWYGPDRVKYLG 59

Query: 726 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 547
           PFSGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 60  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 119

Query: 546 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGG 367
           RNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSLIHAQSILAIWA QVILMGAVEGYR+AGG
Sbjct: 120 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRVAGG 179

Query: 366 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 187
           PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 180 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239

Query: 186 ENLADHLADPVANNAWSYATNFVPGK 109
           ENLADHLADPV NNAWSYATNFVPGK
Sbjct: 240 ENLADHLADPVNNNAWSYATNFVPGK 265


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