BLASTX nr result

ID: Atractylodes22_contig00000447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000447
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37137.3| unnamed protein product [Vitis vinifera]              188   5e-46
ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-...   188   5e-46
emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]   188   5e-46
ref|XP_002529848.1| DNA repair and recombination protein RAD26, ...   171   7e-41
ref|XP_002307656.1| chromatin remodeling complex subunit [Populu...   166   2e-39

>emb|CBI37137.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score =  188 bits (477), Expect = 5e-46
 Identities = 99/183 (54%), Positives = 133/183 (72%), Gaps = 3/183 (1%)
 Frame = -3

Query: 544 VEDVKNFSRAEEHVYXXXXXXXXXXXXXEQSILQASSNDLTLQHALATDRLESLKRTKAQ 365
           V+  +N  R E HV              ++ ++QAS N+LTLQHALA DRL SLK+TKAQ
Sbjct: 84  VQQARNTERNENHVSHGNDNRAQGDAEDDKLVIQASPNNLTLQHALAADRLRSLKKTKAQ 143

Query: 364 LEKQFANLGNEGFPESSKHEKLLQSLVKEQPNRKRKQKEIPTTNKKLKKRHKTVAFNDDG 185
           LE + ++   E   ++ +H+K++Q+LVKE+   K++ KEIP + K LKKR KT++F+DD 
Sbjct: 144 LEIELSDWQKEKPSKTVEHDKVIQNLVKEEARPKKRLKEIPKSGKDLKKRKKTISFDDDV 203

Query: 184 DFDAVLNAASAGFVETERDELVRKGILTPFHNLKGYERRIEEPGSS---HTIEEGDKGND 14
           DFDAVL+AASAGFVETERD+LVRKGILTPFH LKG+ERR+++PG S   +  EEGDK +D
Sbjct: 204 DFDAVLDAASAGFVETERDKLVRKGILTPFHKLKGFERRLQQPGPSSRDNLPEEGDKIDD 263

Query: 13  LSS 5
           L+S
Sbjct: 264 LAS 266


>ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
          Length = 1227

 Score =  188 bits (477), Expect = 5e-46
 Identities = 99/183 (54%), Positives = 133/183 (72%), Gaps = 3/183 (1%)
 Frame = -3

Query: 544 VEDVKNFSRAEEHVYXXXXXXXXXXXXXEQSILQASSNDLTLQHALATDRLESLKRTKAQ 365
           V+  +N  R E HV              ++ ++QAS N+LTLQHALA DRL SLK+TKAQ
Sbjct: 84  VQQARNTERNENHVSHGNDNRAQGDAEDDKLVIQASPNNLTLQHALAADRLRSLKKTKAQ 143

Query: 364 LEKQFANLGNEGFPESSKHEKLLQSLVKEQPNRKRKQKEIPTTNKKLKKRHKTVAFNDDG 185
           LE + ++   E   ++ +H+K++Q+LVKE+   K++ KEIP + K LKKR KT++F+DD 
Sbjct: 144 LEIELSDWQKEKPSKTVEHDKVIQNLVKEEARPKKRLKEIPKSGKDLKKRKKTISFDDDV 203

Query: 184 DFDAVLNAASAGFVETERDELVRKGILTPFHNLKGYERRIEEPGSS---HTIEEGDKGND 14
           DFDAVL+AASAGFVETERD+LVRKGILTPFH LKG+ERR+++PG S   +  EEGDK +D
Sbjct: 204 DFDAVLDAASAGFVETERDKLVRKGILTPFHKLKGFERRLQQPGPSSRDNLPEEGDKIDD 263

Query: 13  LSS 5
           L+S
Sbjct: 264 LAS 266


>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
          Length = 1249

 Score =  188 bits (477), Expect = 5e-46
 Identities = 99/183 (54%), Positives = 133/183 (72%), Gaps = 3/183 (1%)
 Frame = -3

Query: 544 VEDVKNFSRAEEHVYXXXXXXXXXXXXXEQSILQASSNDLTLQHALATDRLESLKRTKAQ 365
           V+  +N  R E HV              ++ ++QAS N+LTLQHALA DRL SLK+TKAQ
Sbjct: 106 VQQARNTERNENHVSHGNDNRAQGDAEDDKLVIQASPNNLTLQHALAADRLRSLKKTKAQ 165

Query: 364 LEKQFANLGNEGFPESSKHEKLLQSLVKEQPNRKRKQKEIPTTNKKLKKRHKTVAFNDDG 185
           LE + ++   E   ++ +H+K++Q+LVKE+   K++ KEIP + K LKKR KT++F+DD 
Sbjct: 166 LEIELSDWQKEKPSKTVEHDKVIQNLVKEEARPKKRLKEIPKSGKDLKKRKKTISFDDDV 225

Query: 184 DFDAVLNAASAGFVETERDELVRKGILTPFHNLKGYERRIEEPGSS---HTIEEGDKGND 14
           DFDAVL+AASAGFVETERD+LVRKGILTPFH LKG+ERR+++PG S   +  EEGDK +D
Sbjct: 226 DFDAVLDAASAGFVETERDKLVRKGILTPFHKLKGFERRLQQPGPSSRGNLPEEGDKIDD 285

Query: 13  LSS 5
           L+S
Sbjct: 286 LAS 288


>ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
           communis] gi|223530676|gb|EEF32549.1| DNA repair and
           recombination protein RAD26, putative [Ricinus communis]
          Length = 1230

 Score =  171 bits (433), Expect = 7e-41
 Identities = 93/183 (50%), Positives = 120/183 (65%), Gaps = 3/183 (1%)
 Frame = -3

Query: 544 VEDVKNFSRAEEHVYXXXXXXXXXXXXXEQSILQASSNDLTLQHALATDRLESLKRTKAQ 365
           VE VKN    E+H Y             + + L  S ND TLQ ALA DRL+SLKRTKA 
Sbjct: 84  VEQVKNVVNGEDHAYDDSVKLQPRDGDDKSTDL-VSPNDFTLQQALAADRLKSLKRTKAD 142

Query: 364 LEKQFANLGNEGFPESSKHEKLLQSLVKEQPNRKRKQKEIPTTNKKLKKRHKTVAFNDDG 185
           +EK+ + L  +   +  +HEKLL  +VKE+P  KRK KE+    K  +K  +TV+F+DD 
Sbjct: 143 IEKEISGLHKDDTTKGMEHEKLLAEMVKEEPRCKRKSKEVQKPGKNKEKNQRTVSFSDDT 202

Query: 184 DFDAVLNAASAGFVETERDELVRKGILTPFHNLKGYERRIEEPGSS---HTIEEGDKGND 14
           DFD +L+AASAGFVETERDELVRKGILTPFH LKG+ER +++ G S   +  EE D+ +D
Sbjct: 203 DFDTMLDAASAGFVETERDELVRKGILTPFHQLKGFERCLQQLGPSSGCNASEEEDRSHD 262

Query: 13  LSS 5
           L+S
Sbjct: 263 LAS 265


>ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222857105|gb|EEE94652.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1206

 Score =  166 bits (421), Expect = 2e-39
 Identities = 91/184 (49%), Positives = 122/184 (66%), Gaps = 4/184 (2%)
 Frame = -3

Query: 544 VEDVKNFSRAEEHVYXXXXXXXXXXXXXEQSILQASSNDLTLQHALATDRLESLKRTKAQ 365
           VE+V +    E   Y             ++S +Q S +D TLQ ALA DRL SLKRTK +
Sbjct: 80  VEEVTDVVSGEHQTYDDGGGTKKRDKGDDESGVQVSPDDFTLQQALAADRLRSLKRTKVK 139

Query: 364 LEKQFANLGNEGFPESSKHEKLLQSLVKEQPNRKRKQKEIPTTNKKLKKRHKTVAFNDDG 185
           LEK+  +L  +   ++ +H+KLL +LVKE P  K+K K++  + K  +K+ KTV+F DD 
Sbjct: 140 LEKELLDLRKDDATKAVEHDKLLANLVKEDPRPKKKSKKVLKSGKNKEKQQKTVSFADDA 199

Query: 184 DFDAVLNAASAGFVETERDELVRKGILTPFHNLKGYERRIEEPGSS----HTIEEGDKGN 17
           DFD +L+ AS+GFVETERDELVRKGILTPFH LKG+ERR+++PGSS     +IEE DK +
Sbjct: 200 DFDLMLDGASSGFVETERDELVRKGILTPFHQLKGFERRLQQPGSSSGKNESIEE-DKTD 258

Query: 16  DLSS 5
            L S
Sbjct: 259 GLDS 262


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