BLASTX nr result

ID: Atractylodes22_contig00000421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000421
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus]              99   5e-19
ref|NP_620566.1| polyprotein [Satsuma dwarf virus] gi|81979373|s...    99   5e-19

>ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus]
          Length = 1190

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/80 (60%), Positives = 56/80 (70%)
 Frame = -3

Query: 241 GPNDTALSETPPLDLGFMERVGELATSSGEGIDKCIAIKCILLQEYNYASNADMGDVLLS 62
           GP       TP LDLGFME+V ELAT  G+ I+KCIAIKCIL  +YN+  +ADMGDVLLS
Sbjct: 316 GPGLFPSPRTPTLDLGFMEKVSELATMPGDSIEKCIAIKCILSNDYNFKEDADMGDVLLS 375

Query: 61  INSKFNGNATEAVERGFISG 2
           + SK+ G    A  RGFISG
Sbjct: 376 LQSKYTGGGDTAEHRGFISG 395


>ref|NP_620566.1| polyprotein [Satsuma dwarf virus]
           gi|81979373|sp|Q9WAL8.1|POL1_SDVS5 RecName: Full=RNA1
           polyprotein; AltName: Full=P1; Contains: RecName:
           Full=Putative helicase; AltName: Full=Putative
           NTP-binding protein; Contains: RecName: Full=Probable
           picornain 3C-like protease; Short=3C-like protease;
           Contains: RecName: Full=Probable RNA-directed RNA
           polymerase gi|4589400|dbj|BAA76746.1| polyprotein
           [Satsuma dwarf virus]
          Length = 2081

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/80 (60%), Positives = 56/80 (70%)
 Frame = -3

Query: 241 GPNDTALSETPPLDLGFMERVGELATSSGEGIDKCIAIKCILLQEYNYASNADMGDVLLS 62
           GP       TP LDLGFME+V ELAT  G+ I+KCIAIKCIL  +YN+  +ADMGDVLLS
Sbjct: 316 GPGLFPSPRTPTLDLGFMEKVSELATMPGDSIEKCIAIKCILSNDYNFKEDADMGDVLLS 375

Query: 61  INSKFNGNATEAVERGFISG 2
           + SK+ G    A  RGFISG
Sbjct: 376 LQSKYTGGGDTAEHRGFISG 395


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