BLASTX nr result
ID: Atractylodes22_contig00000414
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00000414
(1523 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI21655.3| unnamed protein product [Vitis vinifera] 279 2e-72
ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp.... 260 6e-67
ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog ... 258 4e-66
ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidop... 253 1e-64
ref|NP_851268.1| DNA repair protein XRCC2-like protein [Arabidop... 253 1e-64
>emb|CBI21655.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 279 bits (713), Expect = 2e-72
Identities = 155/299 (51%), Positives = 198/299 (66%), Gaps = 12/299 (4%)
Frame = -1
Query: 1382 VSNIVEIAGPSPSAKTEILLQVAVSCILPKNRNGVQYGGLEHSVLFLDLDCRLDIFRLSQ 1203
+ N+VEIAGPSPSAKT+IL+Q AV CILPK GV YGGLEH V+F+DLDCR DI LSQ
Sbjct: 24 LGNVVEIAGPSPSAKTQILIQAAVYCILPKEWRGVHYGGLEHLVMFIDLDCRFDILCLSQ 83
Query: 1202 SLKLRIAEANRL-HKITKKQKAVDVCNYISEHQCEYDDMDLFTECMKRFSYTRCYDSFEF 1026
SLK R+ E + +K+ +Q + E YD+ +LF CM+RF Y RCYDSFEF
Sbjct: 84 SLKHRLMETSGSGNKVNWEQNDDPWGSGTEEPNIGYDE-ELFAACMRRFLYIRCYDSFEF 142
Query: 1025 LAALKVLRYKLEKERKADGSGVHVLMIDNIGAFHWIDRGFSSLPQGNPNRKNLSLQSVLE 846
LA LK LRY+L++ R+ G H LMID+IGAF+W+DR +SL + +RK LSLQS+ E
Sbjct: 143 LATLKTLRYRLQRARETHGVTAHFLMIDSIGAFYWVDRASTSLHLESNSRKRLSLQSISE 202
Query: 845 TVVQEIKKXXXXXXXXXLATKTV-------TNQVKSSYSNWASGAASE-ANIGKGWSKNT 690
TVV+EI+K LATK TN+VK + +S S + G K +
Sbjct: 203 TVVEEIRKLLLVHPMLVLATKATILGDTYSTNEVKRTSMKLSSNDPSNLRTVTGGPQKLS 262
Query: 689 YREYMPSIWQSFVTHRILVRASDDE---RKLQDRDCFLAEWLLPALNLSDEFAVGEAGI 522
YRE+MP +WQSFVTHRILVRA+DD+ K Q R FL+EWL+P+LN SD+F V +AG+
Sbjct: 263 YREFMPLVWQSFVTHRILVRAADDDPANSKYQSRSIFLSEWLMPSLNFSDKFIVRDAGV 321
>ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310742|gb|EFH41166.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 389
Score = 260 bits (665), Expect = 6e-67
Identities = 156/338 (46%), Positives = 199/338 (58%), Gaps = 17/338 (5%)
Frame = -1
Query: 1493 AKGWINGDESAKQMLGRVLKEXXXXXXXXXXXXXXLGVSNIVEIAGPSPSAKTEILLQVA 1314
A+ WI GDE+AKQML RVLK+ N+VEI G SPSAKT+IL+Q A
Sbjct: 6 ARSWICGDETAKQMLSRVLKDRAFMLLPPLHRVPLRA-GNVVEITGASPSAKTQILIQAA 64
Query: 1313 VSCILPKNRNGVQYGGLEHSVLFLDLDCRLDIFRLSQSLKLRIAEANRLHK---ITKKQK 1143
+SCILPK NG+ YGGL VLFLDLDCR D+ RLSQ LK R+ +ANRL ++
Sbjct: 65 ISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANRLGNGAWWQLEES 124
Query: 1142 AVDVCNYISEHQCEYDDMDLFTECMKRFSYTRCYDSFEFLAALKVLRYKLEKERKADGSG 963
V C E D +L+ CMKRF Y RCYDS E L++LK L Y++ ++++A GS
Sbjct: 125 NVKSCKSAQEKPKTVFDEELYVSCMKRFLYVRCYDSLELLSSLKTLHYRI-RQQEACGSQ 183
Query: 962 VHVLMIDNIGAFHWIDRGFSSLPQGNPNRKNLSLQSVLETVVQEIKKXXXXXXXXXLATK 783
V VLMID+IGAFHW DR SSL NRK+LSL +V+E +VQE+KK LATK
Sbjct: 184 VGVLMIDSIGAFHWTDRLSSSLALETHNRKSLSLTNVVEMIVQELKKLLQVHSLVVLATK 243
Query: 782 TV----------TNQVKSSYSNWASGAASEANIGKGWSKNTYREYMPSIWQSFVTHRILV 633
N+ SS ++ AAS+A + RE+MPS WQ+FVTH+I++
Sbjct: 244 ATIYEEKYPAIENNRKFSSNDDFPGNAASKA------QQPLIREFMPSSWQAFVTHKIII 297
Query: 632 RASDDERKL----QDRDCFLAEWLLPALNLSDEFAVGE 531
R S D R L Q+ +L EWL P L+ D F V +
Sbjct: 298 RKSADHRSLQTGQQNLSAYLLEWLQPQLSSIDRFIVDD 335
>ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog [Vitis vinifera]
Length = 315
Score = 258 bits (658), Expect = 4e-66
Identities = 150/299 (50%), Positives = 188/299 (62%), Gaps = 9/299 (3%)
Frame = -1
Query: 1493 AKGWINGDESAKQMLGRVLKEXXXXXXXXXXXXXXLGVSNIVEIAGPSPSAKTEILLQVA 1314
A+GWI DESAK+ML RV E + N+VEIAGPSPSAKT+IL+Q A
Sbjct: 3 ARGWICTDESAKEMLSRVSAERSLMLLPPLHRVPLR-LGNVVEIAGPSPSAKTQILIQAA 61
Query: 1313 VSCILPKNRNGVQYGGLEHSVLFLDLDCRLDIFRLSQSLKLRIAEANRL-HKITKKQKAV 1137
V CILPK GV YGGLEH V+F+DLDCR DI LSQSLK R+ E + +K+ +Q
Sbjct: 62 VYCILPKEWRGVHYGGLEHLVMFIDLDCRFDILCLSQSLKHRLMETSGSGNKVNWEQNDD 121
Query: 1136 DVCNYISEHQCEYDDMDLFTECMKRFSYTRCYDSFEFLAALKVLRYKLEKERKADGSGVH 957
+ E YD+ +LF CM+RF Y RCYDSFEFLA LK LRY+L++ R+ G H
Sbjct: 122 PWGSGTEEPNIGYDE-ELFAACMRRFLYIRCYDSFEFLATLKTLRYRLQRARETHGVTAH 180
Query: 956 VLMIDNIGAFHWIDRGFSSLPQGNPNRKNLSLQSVLETVVQEIKKXXXXXXXXXLATKTV 777
LMID+IGAF+W+DR +SL + +RK LSLQS+ ETVV+EI+K LATK
Sbjct: 181 FLMIDSIGAFYWVDRASTSLHLESNSRKRLSLQSISETVVEEIRKLLLVHPMLVLATKAT 240
Query: 776 -------TNQVKSSYSNWASGAASE-ANIGKGWSKNTYREYMPSIWQSFVTHRILVRAS 624
TN+VK + +S S + G K +YRE+MP +WQSFVTHRILVRA+
Sbjct: 241 ILGDTYSTNEVKRTSMKLSSNDPSNLRTVTGGPQKLSYREFMPLVWQSFVTHRILVRAA 299
>ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
gi|332010527|gb|AED97910.1| DNA repair protein XRCC2-like
protein [Arabidopsis thaliana]
Length = 342
Score = 253 bits (645), Expect = 1e-64
Identities = 152/338 (44%), Positives = 197/338 (58%), Gaps = 17/338 (5%)
Frame = -1
Query: 1493 AKGWINGDESAKQMLGRVLKEXXXXXXXXXXXXXXLGVSNIVEIAGPSPSAKTEILLQVA 1314
A+ WI GDE+AKQML RVLK+ N+VEI G S SAKT+IL+Q A
Sbjct: 6 ARSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRA-GNVVEITGASTSAKTQILIQAA 64
Query: 1313 VSCILPKNRNGVQYGGLEHSVLFLDLDCRLDIFRLSQSLKLRIAEANRLHK---ITKKQK 1143
+SCILPK NG+ YGGL VLFLDLDCR D+ RLSQ LK R+ +AN L ++
Sbjct: 65 ISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANWLGNGAWWQLEES 124
Query: 1142 AVDVCNYISEHQCEYDDMDLFTECMKRFSYTRCYDSFEFLAALKVLRYKLEKERKADGSG 963
V C E D +L+ CMKRF Y RCYDS E L++LK L Y+++ +++A GS
Sbjct: 125 NVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELLSSLKTLHYRIQ-QQEACGSQ 183
Query: 962 VHVLMIDNIGAFHWIDRGFSSLPQGNPNRKNLSLQSVLETVVQEIKKXXXXXXXXXLATK 783
V VLMID+IGAFHW DR SSL NRK+LSL +V+ET+VQE+KK LATK
Sbjct: 184 VGVLMIDSIGAFHWTDRLSSSLALETHNRKSLSLTNVVETIVQELKKLLLVHSLVVLATK 243
Query: 782 ----------TVTNQVKSSYSNWASGAASEANIGKGWSKNTYREYMPSIWQSFVTHRILV 633
N+ SS +++ AS+A + +RE+MPS WQ+FVTH+I++
Sbjct: 244 GTIYEEKYPANENNRKVSSNDHFSGNVASKA------QQPPFREFMPSSWQAFVTHKIII 297
Query: 632 RASDDERKLQDRD----CFLAEWLLPALNLSDEFAVGE 531
R S D + LQ + EWL P L+ D F V +
Sbjct: 298 RKSADYQSLQTGQQNLLAYSLEWLQPQLSRIDRFIVDD 335
>ref|NP_851268.1| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
gi|55583880|sp|Q682D3.2|XRCC2_ARATH RecName: Full=DNA
repair protein XRCC2 homolog; AltName: Full=X-ray repair
cross-complementing protein 2 homolog; Short=AtXRCC2
gi|27524915|emb|CAD12880.1| putative X-ray repair
cross-complementing protein 2 [Arabidopsis thaliana]
gi|332010528|gb|AED97911.1| DNA repair protein XRCC2-like
protein [Arabidopsis thaliana]
Length = 372
Score = 253 bits (645), Expect = 1e-64
Identities = 152/338 (44%), Positives = 197/338 (58%), Gaps = 17/338 (5%)
Frame = -1
Query: 1493 AKGWINGDESAKQMLGRVLKEXXXXXXXXXXXXXXLGVSNIVEIAGPSPSAKTEILLQVA 1314
A+ WI GDE+AKQML RVLK+ N+VEI G S SAKT+IL+Q A
Sbjct: 6 ARSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRA-GNVVEITGASTSAKTQILIQAA 64
Query: 1313 VSCILPKNRNGVQYGGLEHSVLFLDLDCRLDIFRLSQSLKLRIAEANRLHK---ITKKQK 1143
+SCILPK NG+ YGGL VLFLDLDCR D+ RLSQ LK R+ +AN L ++
Sbjct: 65 ISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANWLGNGAWWQLEES 124
Query: 1142 AVDVCNYISEHQCEYDDMDLFTECMKRFSYTRCYDSFEFLAALKVLRYKLEKERKADGSG 963
V C E D +L+ CMKRF Y RCYDS E L++LK L Y+++ +++A GS
Sbjct: 125 NVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELLSSLKTLHYRIQ-QQEACGSQ 183
Query: 962 VHVLMIDNIGAFHWIDRGFSSLPQGNPNRKNLSLQSVLETVVQEIKKXXXXXXXXXLATK 783
V VLMID+IGAFHW DR SSL NRK+LSL +V+ET+VQE+KK LATK
Sbjct: 184 VGVLMIDSIGAFHWTDRLSSSLALETHNRKSLSLTNVVETIVQELKKLLLVHSLVVLATK 243
Query: 782 ----------TVTNQVKSSYSNWASGAASEANIGKGWSKNTYREYMPSIWQSFVTHRILV 633
N+ SS +++ AS+A + +RE+MPS WQ+FVTH+I++
Sbjct: 244 GTIYEEKYPANENNRKVSSNDHFSGNVASKA------QQPPFREFMPSSWQAFVTHKIII 297
Query: 632 RASDDERKLQDRD----CFLAEWLLPALNLSDEFAVGE 531
R S D + LQ + EWL P L+ D F V +
Sbjct: 298 RKSADYQSLQTGQQNLLAYSLEWLQPQLSRIDRFIVDD 335