BLASTX nr result

ID: Atractylodes22_contig00000372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000372
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein...   228   4e-58
gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-bind...   226   2e-57
gb|AFO67221.1| putative chlorophyll a/b binding protein, partial...   224   4e-57
gb|AAF26741.1|AF220527_1 chlorophyll a/b binding protein precurs...   220   8e-56
gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I p...   220   1e-55

>dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein (LHCP) precursor
           [Lactuca sativa]
          Length = 266

 Score =  228 bits (581), Expect = 4e-58
 Identities = 108/118 (91%), Positives = 111/118 (94%), Gaps = 1/118 (0%)
 Frame = +1

Query: 61  FVGRVVKASPSGSELFGNGRVSMRKTSP-KKVAPSGSPWYGPDRVKYLGPFSGEAPSYLT 237
           F G+ VK SPS SELFGNGRVSMRKT+  KK APSGSPWYGPDRVKYLGPFSGEAPSYLT
Sbjct: 12  FAGQAVKTSPSSSELFGNGRVSMRKTAAAKKAAPSGSPWYGPDRVKYLGPFSGEAPSYLT 71

Query: 238 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 411
           GEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA
Sbjct: 72  GEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 129


>gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Artemisia annua]
          Length = 254

 Score =  226 bits (575), Expect = 2e-57
 Identities = 108/116 (93%), Positives = 111/116 (95%), Gaps = 1/116 (0%)
 Frame = +1

Query: 67  GRVVKASPSGSELFGNGRVSMRKTS-PKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTGE 243
           G+ VKA+PS SEL GNGRVSMRKT+ PKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTGE
Sbjct: 2   GQAVKAAPSNSELLGNGRVSMRKTAAPKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTGE 61

Query: 244 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 411
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA
Sbjct: 62  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 117


>gb|AFO67221.1| putative chlorophyll a/b binding protein, partial [Aralia elata]
          Length = 152

 Score =  224 bits (572), Expect = 4e-57
 Identities = 105/117 (89%), Positives = 108/117 (92%)
 Frame = +1

Query: 61  FVGRVVKASPSGSELFGNGRVSMRKTSPKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTG 240
           F G+ VK +PS SELFGNGR+SMRKT  K VA SGSPWYGPDRVKYLGPFSGEAPSYLTG
Sbjct: 13  FAGKAVKVAPSSSELFGNGRISMRKTGKKPVASSGSPWYGPDRVKYLGPFSGEAPSYLTG 72

Query: 241 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 411
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 129


>gb|AAF26741.1|AF220527_1 chlorophyll a/b binding protein precursor [Euphorbia esula]
          Length = 268

 Score =  220 bits (561), Expect = 8e-56
 Identities = 106/118 (89%), Positives = 108/118 (91%), Gaps = 1/118 (0%)
 Frame = +1

Query: 61  FVGRVVKASPSG-SELFGNGRVSMRKTSPKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLT 237
           F G+ VK SPS  SEL GNGRVSMRK + KKVAPSGSPWYGPDRVKYLGPFSGE PSYLT
Sbjct: 14  FAGQAVKLSPSSASELMGNGRVSMRKAATKKVAPSGSPWYGPDRVKYLGPFSGEPPSYLT 73

Query: 238 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 411
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA
Sbjct: 74  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 131


>gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I precursor [Panax
           ginseng]
          Length = 266

 Score =  220 bits (560), Expect = 1e-55
 Identities = 103/117 (88%), Positives = 106/117 (90%)
 Frame = +1

Query: 61  FVGRVVKASPSGSELFGNGRVSMRKTSPKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTG 240
           F G  VK +PS SELFG+GR+SMRKT  K  A SGSPWYGPDRVKYLGPFSGEAPSYLTG
Sbjct: 13  FAGMAVKVAPSSSELFGSGRISMRKTGKKPAASSGSPWYGPDRVKYLGPFSGEAPSYLTG 72

Query: 241 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 411
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 129


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