BLASTX nr result

ID: Atractylodes22_contig00000371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000371
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein...   505   e-141
gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-bind...   493   e-137
gb|AAA80593.1| chlorophyll a/b binding protein [Solanum tuberosum]    485   e-135
gb|AAA80589.1| chlorophyll a/b binding protein [Solanum tuberosum]    484   e-134
dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein...   484   e-134

>dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein (LHCP) precursor
           [Lactuca sativa]
          Length = 266

 Score =  505 bits (1301), Expect = e-141
 Identities = 243/256 (94%), Positives = 249/256 (97%), Gaps = 1/256 (0%)
 Frame = +3

Query: 105 PFTGQVVKTAPSGSEIFGKGRVSMRKSAV-KKVAPSGSPWYGPDRVKYLGPFSGEAPSYL 281
           PF GQ VKT+PS SE+FG GRVSMRK+A  KK APSGSPWYGPDRVKYLGPFSGEAPSYL
Sbjct: 11  PFAGQAVKTSPSSSELFGNGRVSMRKTAAAKKAAPSGSPWYGPDRVKYLGPFSGEAPSYL 70

Query: 282 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 461
           TGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV
Sbjct: 71  TGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 130

Query: 462 WFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLY 641
           WFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLY
Sbjct: 131 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLY 190

Query: 642 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 821
           PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP
Sbjct: 191 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 250

Query: 822 VANNAWSYATNFVPGK 869
           VANNAWSYATNFVPGK
Sbjct: 251 VANNAWSYATNFVPGK 266


>gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Artemisia annua]
          Length = 254

 Score =  493 bits (1270), Expect = e-137
 Identities = 240/253 (94%), Positives = 244/253 (96%), Gaps = 1/253 (0%)
 Frame = +3

Query: 114 GQVVKTAPSGSEIFGKGRVSMRKSAV-KKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTGE 290
           GQ VK APS SE+ G GRVSMRK+A  KKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTGE
Sbjct: 2   GQAVKAAPSNSELLGNGRVSMRKTAAPKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTGE 61

Query: 291 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 470
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK
Sbjct: 62  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 121

Query: 471 AGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 650
           AGAQIFSEGGLDYLGNPSL+HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG
Sbjct: 122 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 181

Query: 651 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVAN 830
           SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLAD LADPVAN
Sbjct: 182 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADRLADPVAN 241

Query: 831 NAWSYATNFVPGK 869
           NAWSYATNFVPGK
Sbjct: 242 NAWSYATNFVPGK 254


>gb|AAA80593.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 265

 Score =  485 bits (1248), Expect = e-135
 Identities = 233/254 (91%), Positives = 242/254 (95%)
 Frame = +3

Query: 108 FTGQVVKTAPSGSEIFGKGRVSMRKSAVKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTG 287
           F GQ VK +PS SEI G GR++MRK AV K APS SPWYGPDRVKYLGPFSGE+PSYLTG
Sbjct: 13  FAGQAVKLSPSTSEITGNGRITMRK-AVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTG 71

Query: 288 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 467
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF
Sbjct: 72  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 131

Query: 468 KAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 647
           KAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV+DPLYPG
Sbjct: 132 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVIDPLYPG 191

Query: 648 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVA 827
           GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 
Sbjct: 192 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251

Query: 828 NNAWSYATNFVPGK 869
           NNAW+YATNFVPGK
Sbjct: 252 NNAWAYATNFVPGK 265


>gb|AAA80589.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 265

 Score =  484 bits (1247), Expect = e-134
 Identities = 233/254 (91%), Positives = 242/254 (95%)
 Frame = +3

Query: 108 FTGQVVKTAPSGSEIFGKGRVSMRKSAVKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTG 287
           F GQ VK +PS SEI G GR++MRK AV K APS SPWYGPDRVKYLGPFSGE+PSYLTG
Sbjct: 13  FAGQAVKLSPSASEISGNGRITMRK-AVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTG 71

Query: 288 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 467
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF
Sbjct: 72  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 131

Query: 468 KAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 647
           KAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEVVDPLYPG
Sbjct: 132 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPG 191

Query: 648 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVA 827
           GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 
Sbjct: 192 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251

Query: 828 NNAWSYATNFVPGK 869
           NNAW++ATNFVPGK
Sbjct: 252 NNAWAFATNFVPGK 265


>dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  484 bits (1247), Expect = e-134
 Identities = 235/254 (92%), Positives = 241/254 (94%)
 Frame = +3

Query: 108 FTGQVVKTAPSGSEIFGKGRVSMRKSAVKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTG 287
           F GQ VK +PS SEI G GRVSMRK+  K VA S SPWYGPDRVKYLGPFSGE+PSYLTG
Sbjct: 13  FAGQAVKLSPSASEITGNGRVSMRKTVAKPVA-SSSPWYGPDRVKYLGPFSGESPSYLTG 71

Query: 288 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 467
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF
Sbjct: 72  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 131

Query: 468 KAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 647
           KAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVILMGAVEGYR+AGGPLGEVVDPLYPG
Sbjct: 132 KAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPG 191

Query: 648 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVA 827
           GSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 
Sbjct: 192 GSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251

Query: 828 NNAWSYATNFVPGK 869
           NNAWSYATNFVPGK
Sbjct: 252 NNAWSYATNFVPGK 265


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