BLASTX nr result

ID: Atractylodes22_contig00000313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000313
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592709.1| 50S ribosomal protein L18 [Medicago truncatu...   138   9e-31
ref|NP_001152098.1| 50S ribosomal protein L18 [Zea mays] gi|2265...   137   2e-30
ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycin...   136   3e-30
ref|XP_004144339.1| PREDICTED: 50S ribosomal protein L18-like [C...   135   7e-30
ref|XP_003566477.1| PREDICTED: 50S ribosomal protein L18-like [B...   134   2e-29

>ref|XP_003592709.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|355481757|gb|AES62960.1| 50S ribosomal protein L18
           [Medicago truncatula]
          Length = 114

 Score =  138 bits (347), Expect = 9e-31
 Identities = 74/104 (71%), Positives = 81/104 (77%)
 Frame = -1

Query: 312 MVIPPPVKAQRITNYLKPYLLKMHFSNKYVSAQVIHAPXXXXXXXXXSQEKALREAWNKS 133
           MVIPPPV+  R+T YLKPY+LKMHF+NKYVSAQVIH P         SQEKALR     S
Sbjct: 1   MVIPPPVRPPRLTQYLKPYVLKMHFTNKYVSAQVIHTPTATVASSASSQEKALR----SS 56

Query: 132 QQSTRDVAAAAKIGKLLGERLLLKDIPAVSVVYKKEQRYHGKVK 1
            ++TRDVAAAAKIGKLL ERL LKDIPAVSV  K+EQRYHGKVK
Sbjct: 57  LETTRDVAAAAKIGKLLAERLSLKDIPAVSVHLKREQRYHGKVK 100


>ref|NP_001152098.1| 50S ribosomal protein L18 [Zea mays]
           gi|226510381|ref|NP_001150322.1| 50S ribosomal protein
           L18 [Zea mays] gi|195608440|gb|ACG26050.1| 50S ribosomal
           protein L18 [Zea mays] gi|195609138|gb|ACG26399.1| 50S
           ribosomal protein L18 [Zea mays]
           gi|195638354|gb|ACG38645.1| 50S ribosomal protein L18
           [Zea mays] gi|195652601|gb|ACG45768.1| 50S ribosomal
           protein L18 [Zea mays] gi|223943857|gb|ACN26012.1|
           unknown [Zea mays] gi|414588054|tpg|DAA38625.1| TPA: 50S
           ribosomal protein L18 isoform 1 [Zea mays]
           gi|414588055|tpg|DAA38626.1| TPA: 50S ribosomal protein
           L18 isoform 2 [Zea mays]
          Length = 114

 Score =  137 bits (344), Expect = 2e-30
 Identities = 71/104 (68%), Positives = 81/104 (77%)
 Frame = -1

Query: 312 MVIPPPVKAQRITNYLKPYLLKMHFSNKYVSAQVIHAPXXXXXXXXXSQEKALREAWNKS 133
           MVIPPP +A R+T +LKPYLL+MHFSNKYVSAQV+H P         SQEK LR     +
Sbjct: 1   MVIPPPARAARVTRFLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLR----PN 56

Query: 132 QQSTRDVAAAAKIGKLLGERLLLKDIPAVSVVYKKEQRYHGKVK 1
            +STRDVAAAAKIGKLLGERLLLK IPAVS+  K+EQ+YHGKVK
Sbjct: 57  MESTRDVAAAAKIGKLLGERLLLKGIPAVSIHMKREQKYHGKVK 100


>ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycine max]
           gi|255631236|gb|ACU15985.1| unknown [Glycine max]
          Length = 114

 Score =  136 bits (342), Expect = 3e-30
 Identities = 72/104 (69%), Positives = 82/104 (78%)
 Frame = -1

Query: 312 MVIPPPVKAQRITNYLKPYLLKMHFSNKYVSAQVIHAPXXXXXXXXXSQEKALREAWNKS 133
           MVIPPPV+  RIT +LKPY+LKMHF+NKYVSAQVIH P         SQEKALR     S
Sbjct: 1   MVIPPPVRPPRITQFLKPYVLKMHFTNKYVSAQVIHTPTATVVSSASSQEKALR----SS 56

Query: 132 QQSTRDVAAAAKIGKLLGERLLLKDIPAVSVVYKKEQRYHGKVK 1
            +++RDVAAAAKIGK+L ERLLLKDIPAVSV  K+EQ+YHGKVK
Sbjct: 57  LETSRDVAAAAKIGKILAERLLLKDIPAVSVHLKREQKYHGKVK 100


>ref|XP_004144339.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
           gi|449480883|ref|XP_004156021.1| PREDICTED: 50S
           ribosomal protein L18-like [Cucumis sativus]
          Length = 114

 Score =  135 bits (339), Expect = 7e-30
 Identities = 72/104 (69%), Positives = 81/104 (77%)
 Frame = -1

Query: 312 MVIPPPVKAQRITNYLKPYLLKMHFSNKYVSAQVIHAPXXXXXXXXXSQEKALREAWNKS 133
           MVIPPP+K  R+T YLKPY+LKMHF+NK+VSAQVIH+          SQEKAL+     S
Sbjct: 1   MVIPPPIKPPRLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQS----S 56

Query: 132 QQSTRDVAAAAKIGKLLGERLLLKDIPAVSVVYKKEQRYHGKVK 1
            +STRDVAAAAKIGKLLGERLLLK IPAV V  K+EQRYHGKVK
Sbjct: 57  MESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQRYHGKVK 100


>ref|XP_003566477.1| PREDICTED: 50S ribosomal protein L18-like [Brachypodium distachyon]
          Length = 114

 Score =  134 bits (336), Expect = 2e-29
 Identities = 71/104 (68%), Positives = 80/104 (76%)
 Frame = -1

Query: 312 MVIPPPVKAQRITNYLKPYLLKMHFSNKYVSAQVIHAPXXXXXXXXXSQEKALREAWNKS 133
           MVIPPP +A RI +YLKPYLL+MHFSNKYVSAQVIH P         SQEK LR      
Sbjct: 1   MVIPPPDRAARIVSYLKPYLLRMHFSNKYVSAQVIHTPTATVACSASSQEKLLR----SD 56

Query: 132 QQSTRDVAAAAKIGKLLGERLLLKDIPAVSVVYKKEQRYHGKVK 1
            +STRDVAAAAKIGKLLGER+LLK IPAVS+  K+EQ+YHGKV+
Sbjct: 57  LESTRDVAAAAKIGKLLGERMLLKGIPAVSIHMKREQKYHGKVR 100


Top