BLASTX nr result
ID: Atractylodes22_contig00000273
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00000273
(1722 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283225.1| PREDICTED: tRNA-dihydrouridine synthase 1-li... 587 e-165
ref|XP_004151862.1| PREDICTED: tRNA-dihydrouridine(16/17) syntha... 582 e-163
ref|XP_002533266.1| tRNA-dihydrouridine synthase, putative [Rici... 571 e-160
ref|XP_002865017.1| nitrogen regulation family protein [Arabidop... 567 e-159
ref|NP_201523.1| tRNA-dihydrouridine synthase 4 [Arabidopsis tha... 563 e-158
>ref|XP_002283225.1| PREDICTED: tRNA-dihydrouridine synthase 1-like [Vitis vinifera]
Length = 424
Score = 587 bits (1513), Expect = e-165
Identities = 294/404 (72%), Positives = 338/404 (83%), Gaps = 4/404 (0%)
Frame = -3
Query: 1537 LHHLSVTLTNNHRMAFXXXXXXXXXQPTEFSTVADVDDHLCSETTDTTAPEPSLSHESSF 1358
L HLS ++ + MA P +++DDH+CSE + +SS
Sbjct: 15 LKHLSRSI---YTMASSISETLTLTLPAGSPQDSNLDDHICSEQQEHQ------ECQSSS 65
Query: 1357 LGSPNGYLTREARIERAWSHWKKLGEPKLIVAPMVDNSELPFRILCRKYGAEAAYTPMLP 1178
P+ LT E+RIERAW+HWKKLG+PKLIVAPMVDNSELPFR+LCRKYGA+AAYTPML
Sbjct: 66 ADWPSRCLTGESRIERAWAHWKKLGQPKLIVAPMVDNSELPFRMLCRKYGAQAAYTPMLH 125
Query: 1177 SRIFSENEKYRSQEFTTCKEDRPLFVQFCANDPETLLEAARRVEAHCDYVDINLGCPQRI 998
SRIFSENEKYRSQEFTTCKEDRPLFVQFCANDP+TLLEAA+RVE +CDYVDINLGCPQRI
Sbjct: 126 SRIFSENEKYRSQEFTTCKEDRPLFVQFCANDPDTLLEAAQRVEPYCDYVDINLGCPQRI 185
Query: 997 ARRGNYGAFLMDKLPLIKSLVEKLALNLSVPVSCKIRIFPDLQDTLNYAKMLEDAGCSLL 818
ARRGNYGAFLMD LPL+KSLVEKLALNL VPVSCKIR+FP+LQDT+NYA+MLEDAGCSLL
Sbjct: 186 ARRGNYGAFLMDNLPLVKSLVEKLALNLHVPVSCKIRVFPNLQDTINYARMLEDAGCSLL 245
Query: 817 AVHGRTRDEKDGKKIRANWDAIRAVKNALAIPVLANGNVRHMDDVQNCLEQTGADGVLSA 638
AVHGRTRDEKDGKK RA+W+AI+AVKNA++IPVLANG++RHMDDVQ CLE+TGADGVLSA
Sbjct: 246 AVHGRTRDEKDGKKFRADWNAIKAVKNAVSIPVLANGDIRHMDDVQRCLEETGADGVLSA 305
Query: 637 ESLLENPALFTGFRTDQ--LVSDIGY--GKLDQGELVVEYLKLCEKYPVPWRMIRSHVHK 470
ESLLENPALF GF+T + L + G G+LDQ L+VEYLKLCEKYPVPWRMIRSHVHK
Sbjct: 306 ESLLENPALFAGFQTAEWALGGEEGNKDGELDQANLLVEYLKLCEKYPVPWRMIRSHVHK 365
Query: 469 MLGEWFRIHPHVREDLNKQSKLSFEFLYGMVNRLKDLGVTRPVY 338
+LGEWFRI P VR+DLN QSKL+FEFLY MV++L++LGV P+Y
Sbjct: 366 LLGEWFRIQPQVRDDLNSQSKLTFEFLYNMVDQLRELGVRIPLY 409
>ref|XP_004151862.1| PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like
[Cucumis sativus] gi|449484028|ref|XP_004156763.1|
PREDICTED: tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like [Cucumis sativus]
Length = 426
Score = 582 bits (1499), Expect = e-163
Identities = 279/376 (74%), Positives = 326/376 (86%), Gaps = 10/376 (2%)
Frame = -3
Query: 1435 DVDDHLCSETT-----DTTAPEPSLSHESS-FLGSPNGYLTREARIERAWSHWKKLGEPK 1274
D+DD LCS + ++++ S S++S+ LGSP GYL+RE+RIERAW+HW KLG PK
Sbjct: 38 DLDDLLCSPSHKQPQHESSSLTNSTSNDSTPLLGSPTGYLSRESRIERAWAHWTKLGRPK 97
Query: 1273 LIVAPMVDNSELPFRILCRKYGAEAAYTPMLPSRIFSENEKYRSQEFTTCKEDRPLFVQF 1094
LIVAPMVDNSELPFR+LCRKYGAEAAYTPML SRIF+ENEKYR+ EFTTC+EDRPLFVQF
Sbjct: 98 LIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQF 157
Query: 1093 CANDPETLLEAARRVEAHCDYVDINLGCPQRIARRGNYGAFLMDKLPLIKSLVEKLALNL 914
CANDP+ LLEAARRVE +CDYVD+NLGCPQRIARRGNYGAFLMD LPL+K++VEKLA NL
Sbjct: 158 CANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNL 217
Query: 913 SVPVSCKIRIFPDLQDTLNYAKMLEDAGCSLLAVHGRTRDEKDGKKIRANWDAIRAVKNA 734
VPVSCKIRIFP+LQDT+NYA+MLEDAGCSLLAVHGRTRDEKDGKK RANW AI AVKNA
Sbjct: 218 QVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNA 277
Query: 733 LAIPVLANGNVRHMDDVQNCLEQTGADGVLSAESLLENPALFTGFRTDQLV----SDIGY 566
+ IPVLANGN+RHM+DV +CL++TG +GVLSAE+LLENPALF GFRT + + +
Sbjct: 278 VRIPVLANGNIRHMEDVNDCLQETGVEGVLSAETLLENPALFAGFRTAEWIEGHEENTRD 337
Query: 565 GKLDQGELVVEYLKLCEKYPVPWRMIRSHVHKMLGEWFRIHPHVREDLNKQSKLSFEFLY 386
G LDQ +L+V+YLKLCEKYPVPWRMIRSHVHK+LG+WF+IHPH+RED N QSKL+FEFLY
Sbjct: 338 GNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLY 397
Query: 385 GMVNRLKDLGVTRPVY 338
MV RL++L V P+Y
Sbjct: 398 NMVERLRELQVKMPLY 413
>ref|XP_002533266.1| tRNA-dihydrouridine synthase, putative [Ricinus communis]
gi|223526922|gb|EEF29128.1| tRNA-dihydrouridine synthase,
putative [Ricinus communis]
Length = 426
Score = 571 bits (1471), Expect = e-160
Identities = 279/377 (74%), Positives = 327/377 (86%), Gaps = 11/377 (2%)
Frame = -3
Query: 1435 DVDDHLCSE-----TTDTTAPEPSLSHESSFLGS--PNGYLTREARIERAWSHWKKLGEP 1277
D D+ LCS T+ +T P+ + SS LGS P+ YL E+R++RAW+HW K+G+P
Sbjct: 35 DDDEVLCSSAHQEHTSFSTLPD---TVSSSCLGSATPSCYLNGESRVDRAWAHWNKIGKP 91
Query: 1276 KLIVAPMVDNSELPFRILCRKYGAEAAYTPMLPSRIFSENEKYRSQEFTTCKEDRPLFVQ 1097
KL+VAPMVDNSELPFR+LCRKYGA+AAYTPML SRIF+ENEKYR+QEFTTC EDRPLFVQ
Sbjct: 92 KLLVAPMVDNSELPFRMLCRKYGADAAYTPMLHSRIFTENEKYRTQEFTTCNEDRPLFVQ 151
Query: 1096 FCANDPETLLEAARRVEAHCDYVDINLGCPQRIARRGNYGAFLMDKLPLIKSLVEKLALN 917
FCANDP+ LLEAAR+VE +CDYVDINLGCPQRIARRGNYGAFLMD LPL+KSLVEKLALN
Sbjct: 152 FCANDPDILLEAARKVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN 211
Query: 916 LSVPVSCKIRIFPDLQDTLNYAKMLEDAGCSLLAVHGRTRDEKDGKKIRANWDAIRAVKN 737
L+VPVSCKIR+FP L DT++YA+MLE+AGCSLLAVHGRTRDEKDGKK RA+W AI+AV+N
Sbjct: 212 LNVPVSCKIRLFPKLDDTISYARMLEEAGCSLLAVHGRTRDEKDGKKFRADWKAIKAVRN 271
Query: 736 ALAIPVLANGNVRHMDDVQNCLEQTGADGVLSAESLLENPALFTGFRTDQLV----SDIG 569
A+ IP+LANGNVRHMDDV+NCLE+TGADGVLSAESLLENPALF GFRT + V
Sbjct: 272 AVKIPLLANGNVRHMDDVRNCLEETGADGVLSAESLLENPALFAGFRTAEWVVGDEESTR 331
Query: 568 YGKLDQGELVVEYLKLCEKYPVPWRMIRSHVHKMLGEWFRIHPHVREDLNKQSKLSFEFL 389
GKLDQ +L+VEYLKLCE+YPVPWRMIR+HVHKMLG+WFRIHPHVRE+LN QS+L+FEFL
Sbjct: 332 DGKLDQADLLVEYLKLCEEYPVPWRMIRAHVHKMLGDWFRIHPHVREELNAQSRLTFEFL 391
Query: 388 YGMVNRLKDLGVTRPVY 338
Y +V++L+ LGV P+Y
Sbjct: 392 YNVVDQLRALGVRIPLY 408
>ref|XP_002865017.1| nitrogen regulation family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310852|gb|EFH41276.1| nitrogen regulation family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 423
Score = 567 bits (1462), Expect = e-159
Identities = 277/372 (74%), Positives = 323/372 (86%), Gaps = 5/372 (1%)
Frame = -3
Query: 1432 VDDHLCSETTDTTAPEPSLSHESSFLGSPNGYLTREARIERAWSHWKKLGEPKLIVAPMV 1253
+DD LCSE D E ++ ++ LGSP+ L+ + R+ERAW+HWKKLG PK IVAPMV
Sbjct: 38 IDDLLCSEQRDGQIEE-TVDAVAASLGSPSRVLSIDTRVERAWAHWKKLGRPKYIVAPMV 96
Query: 1252 DNSELPFRILCRKYGAEAAYTPMLPSRIFSENEKYRSQEFTTCKEDRPLFVQFCANDPET 1073
DNSELPFR+LC+KYGA+AAYTPML SRIF+E EKYR+QEFTTCKEDRPLFVQFCANDP+T
Sbjct: 97 DNSELPFRLLCQKYGAQAAYTPMLHSRIFTETEKYRNQEFTTCKEDRPLFVQFCANDPDT 156
Query: 1072 LLEAARRVEAHCDYVDINLGCPQRIARRGNYGAFLMDKLPLIKSLVEKLALNLSVPVSCK 893
LLEAA+RVE +CDYVDINLGCPQRIARRGNYGAFLMD LPL+KSLVEKLA NL+VPVSCK
Sbjct: 157 LLEAAKRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAQNLNVPVSCK 216
Query: 892 IRIFPDLQDTLNYAKMLEDAGCSLLAVHGRTRDEKDGKKIRANWDAIRAVKNALAIPVLA 713
IRIFP+LQDTL YAKMLEDAGCSLLAVHGRTRDEKDGKK+RA+W AI+ VKNAL IPVL
Sbjct: 217 IRIFPNLQDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKKLRADWSAIKEVKNALRIPVLG 276
Query: 712 NGNVRHMDDVQNCLEQTGADGVLSAESLLENPALFTGFRTDQLVS---DIGY--GKLDQG 548
NGNVR ++DV NC+++TG +GVLSAE+LLENPA F GFRT + VS + G+ G LDQG
Sbjct: 277 NGNVRCIEDVDNCIKETGVEGVLSAETLLENPAAFAGFRTAEWVSENEEEGFVDGGLDQG 336
Query: 547 ELVVEYLKLCEKYPVPWRMIRSHVHKMLGEWFRIHPHVREDLNKQSKLSFEFLYGMVNRL 368
+LVVEYLKLCEK+PVPWRMIRSHVHKMLGEWFRIHP VRE LN Q+ L+FEFLYG+V++L
Sbjct: 337 DLVVEYLKLCEKHPVPWRMIRSHVHKMLGEWFRIHPQVREQLNAQNILTFEFLYGLVDQL 396
Query: 367 KDLGVTRPVYEQ 332
++LG P+Y++
Sbjct: 397 RELGGRVPLYKK 408
>ref|NP_201523.1| tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana]
gi|10177609|dbj|BAB10956.1| unnamed protein product
[Arabidopsis thaliana] gi|15146316|gb|AAK83641.1|
AT5g67220/K21H1_18 [Arabidopsis thaliana]
gi|20908082|gb|AAM26724.1| AT5g67220/K21H1_18
[Arabidopsis thaliana] gi|332010932|gb|AED98315.1|
tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana]
Length = 423
Score = 563 bits (1452), Expect = e-158
Identities = 275/372 (73%), Positives = 320/372 (86%), Gaps = 5/372 (1%)
Frame = -3
Query: 1432 VDDHLCSETTDTTAPEPSLSHESSFLGSPNGYLTREARIERAWSHWKKLGEPKLIVAPMV 1253
+DD LCSE D E ++ + LGSP+ L+ + R+ERAW+HWKKLG PK IVAPMV
Sbjct: 38 LDDILCSEQRDGQIEE-TVDTAPASLGSPSRVLSIDTRVERAWAHWKKLGRPKYIVAPMV 96
Query: 1252 DNSELPFRILCRKYGAEAAYTPMLPSRIFSENEKYRSQEFTTCKEDRPLFVQFCANDPET 1073
DNSELPFR+LC+KYGA+AAYTPML SRIF+E EKYR+QEFTTCKEDRPLFVQFCANDP+T
Sbjct: 97 DNSELPFRLLCQKYGAQAAYTPMLHSRIFTETEKYRNQEFTTCKEDRPLFVQFCANDPDT 156
Query: 1072 LLEAARRVEAHCDYVDINLGCPQRIARRGNYGAFLMDKLPLIKSLVEKLALNLSVPVSCK 893
LLEAA+RVE +CDYVDINLGCPQRIARRGNYGAFLMD LPL+KSLVEKLA NL+VPVSCK
Sbjct: 157 LLEAAKRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAQNLNVPVSCK 216
Query: 892 IRIFPDLQDTLNYAKMLEDAGCSLLAVHGRTRDEKDGKKIRANWDAIRAVKNALAIPVLA 713
IRIFP+L+DTL YAKMLEDAGCSLLAVHGRTRDEKDGKK RA+W AI+ VKNA+ IPVLA
Sbjct: 217 IRIFPNLEDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWSAIKEVKNAMRIPVLA 276
Query: 712 NGNVRHMDDVQNCLEQTGADGVLSAESLLENPALFTGFRTDQLVSD---IGY--GKLDQG 548
NGNVR ++DV NC+++TG +GVLSAE+LLENPA F GFRT + D G+ G LDQG
Sbjct: 277 NGNVRCIEDVDNCIKETGVEGVLSAETLLENPAAFAGFRTAEWAKDNEEEGFVDGGLDQG 336
Query: 547 ELVVEYLKLCEKYPVPWRMIRSHVHKMLGEWFRIHPHVREDLNKQSKLSFEFLYGMVNRL 368
+LVVEYLKLCEK+PVPWRMIRSHVHKMLGEWFRIHP VRE LN Q+ L+FEFLYG+V++L
Sbjct: 337 DLVVEYLKLCEKHPVPWRMIRSHVHKMLGEWFRIHPQVREQLNAQNILTFEFLYGLVDQL 396
Query: 367 KDLGVTRPVYEQ 332
++LG P+Y++
Sbjct: 397 RELGGRVPLYKK 408