BLASTX nr result

ID: Atractylodes22_contig00000214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000214
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25078.3| unnamed protein product [Vitis vinifera]              105   6e-21
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   104   1e-20
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...    98   9e-19

>emb|CBI25078.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  105 bits (262), Expect = 6e-21
 Identities = 56/112 (50%), Positives = 75/112 (66%)
 Frame = -1

Query: 337 LARLLPNCKRNYFPELLQSGRFLHTYSSFAIHNQASSNDSGSDNREIDVDLLFDSCTNAH 158
           +++ LP  +R+Y  +L  +      +SS+ + NQ         N EID + LFDSCT   
Sbjct: 16  ISKFLPLLRRHY--QLFSAATSSPHFSSYGLENQ---------NEEIDFNSLFDSCTKTL 64

Query: 157 LAKRLHALLIVLGKVQSMFISTRLINLHANLGNISLCQQVFDQIPRKDVYTW 2
           LAKRLHALL+V GK+QS FIS RL+NL+A+LG++SL +  FDQI RKDVYTW
Sbjct: 65  LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTW 116


>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  104 bits (260), Expect = 1e-20
 Identities = 57/110 (51%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
 Frame = -1

Query: 328 LLPNCKRNYFPELLQSGRF-LHTYSSFAIHNQASSNDSGSDNREIDVDLLFDSCTNAHLA 152
           L P  K  Y  + L   R  +  +S+     Q SS   G+ N EID + LFDS T    A
Sbjct: 76  LAPTLKSRYTSKFLPPRRRPIQLFSAARSSPQFSSYGLGNQNEEIDFNFLFDSSTKTPFA 135

Query: 151 KRLHALLIVLGKVQSMFISTRLINLHANLGNISLCQQVFDQIPRKDVYTW 2
           K LHALL+V GKVQS+FISTRL+NL+ANLG++SL +  FDQIP+KDVY W
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAW 185


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  104 bits (260), Expect = 1e-20
 Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
 Frame = -1

Query: 328 LLPNCKRNYFPELLQSGRF-LHTYSSFAIHNQASSNDSGSDNREIDVDLLFDSCTNAHLA 152
           L P  K  +  + L   R  +  +S+     Q SS   G+ N EID + LFDS T    A
Sbjct: 76  LAPTLKSRHTSKFLPPRRRPIQLFSAARSSPQFSSYGLGNQNEEIDFNFLFDSSTKTPFA 135

Query: 151 KRLHALLIVLGKVQSMFISTRLINLHANLGNISLCQQVFDQIPRKDVYTW 2
           K LHALL+V GKVQS+FISTRL+NL+ANLG++SL +  FDQIP+KDVYTW
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTW 185


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  100 bits (249), Expect = 2e-19
 Identities = 49/82 (59%), Positives = 61/82 (74%)
 Frame = -1

Query: 247 IHNQASSNDSGSDNREIDVDLLFDSCTNAHLAKRLHALLIVLGKVQSMFISTRLINLHAN 68
           +  + SS   G+ N EID + LFDS T    AK LHALL+V GKVQS+FISTRL+NL+AN
Sbjct: 4   VSKKFSSYGLGNQNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYAN 63

Query: 67  LGNISLCQQVFDQIPRKDVYTW 2
           LG++SL +  FDQIP+KDVY W
Sbjct: 64  LGDVSLSRCTFDQIPQKDVYAW 85


>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score = 98.2 bits (243), Expect = 9e-19
 Identities = 47/69 (68%), Positives = 56/69 (81%)
 Frame = -1

Query: 208 NREIDVDLLFDSCTNAHLAKRLHALLIVLGKVQSMFISTRLINLHANLGNISLCQQVFDQ 29
           N EID + LFDSCT   LAKRLHALL+V GK+QS FIS RL+NL+A+LG++SL +  FDQ
Sbjct: 74  NEEIDFNSLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQ 133

Query: 28  IPRKDVYTW 2
           I RKDVYTW
Sbjct: 134 IQRKDVYTW 142


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