BLASTX nr result

ID: Atractylodes22_contig00000161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000161
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crys...    61   8e-08
ref|XP_004158327.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...    60   2e-07
ref|XP_004141118.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...    60   2e-07
ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    59   5e-07
ref|XP_003618769.1| E3 ubiquitin-protein ligase RGLG2 [Medicago ...    59   5e-07

>gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crystallinum]
          Length = 472

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = -2

Query: 131 YGGPPNRPQNKFDRRYSTIADSYNSLEQVTEALARAGLESSNL 3
           Y  P + P+ + DRRYS IAD Y+SL+QVTEALA AGLESSNL
Sbjct: 70  YSVPTHEPKKRLDRRYSRIADDYSSLDQVTEALAHAGLESSNL 112


>ref|XP_004158327.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Cucumis sativus]
          Length = 456

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = -2

Query: 107 QNKFDRRYSTIADSYNSLEQVTEALARAGLESSNL 3
           + KFDRRYS IAD+Y SLE+VTEALARAGLESSNL
Sbjct: 70  RKKFDRRYSRIADNYKSLEEVTEALARAGLESSNL 104


>ref|XP_004141118.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Cucumis sativus]
          Length = 444

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = -2

Query: 107 QNKFDRRYSTIADSYNSLEQVTEALARAGLESSNL 3
           + KFDRRYS IAD+Y SLE+VTEALARAGLESSNL
Sbjct: 70  RKKFDRRYSRIADNYKSLEEVTEALARAGLESSNL 104


>ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 447

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/43 (72%), Positives = 34/43 (79%)
 Frame = -2

Query: 131 YGGPPNRPQNKFDRRYSTIADSYNSLEQVTEALARAGLESSNL 3
           YG   N    + DRRYS IAD+YNSLE+VTEALARAGLESSNL
Sbjct: 56  YGNVDNG--RRLDRRYSRIADNYNSLEEVTEALARAGLESSNL 96


>ref|XP_003618769.1| E3 ubiquitin-protein ligase RGLG2 [Medicago truncatula]
           gi|355493784|gb|AES74987.1| E3 ubiquitin-protein ligase
           RGLG2 [Medicago truncatula]
          Length = 486

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = -2

Query: 122 PPNRPQNKFDRRYSTIADSYNSLEQVTEALARAGLESSNL 3
           P +  Q K DR+YS IAD+YNS+++VTEALARAGLESSNL
Sbjct: 89  PRHDYQRKLDRKYSRIADNYNSIDEVTEALARAGLESSNL 128


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