BLASTX nr result

ID: Atractylodes22_contig00000151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000151
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520518.1| protein with unknown function [Ricinus commu...    75   7e-12
ref|XP_003543528.1| PREDICTED: transcription initiation factor I...    67   1e-09
ref|XP_003543527.1| PREDICTED: transcription initiation factor I...    67   1e-09
gb|AFW77526.1| transcription factor/ transcription initiation fa...    65   6e-09
gb|AFW77525.1| hypothetical protein ZEAMMB73_875019 [Zea mays]         65   6e-09

>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
           gi|223540360|gb|EEF41931.1| protein with unknown
           function [Ricinus communis]
          Length = 383

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/59 (62%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
 Frame = -2

Query: 173 VDNS--YNIPTGGTPITPSDYSSVNENGTSDSKAGRPSTYMQPPSPWLNQRPSLDVNVA 3
           VDNS  YNIPTG T   P+  S  +  G++++KAGRPS YMQPPSPW+NQRP LDVN+A
Sbjct: 114 VDNSSMYNIPTGPTSEYPTPVS--DSGGSTEAKAGRPSPYMQPPSPWINQRPPLDVNIA 170


>ref|XP_003543528.1| PREDICTED: transcription initiation factor IIA large subunit-like
           isoform 2 [Glycine max]
          Length = 384

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/59 (61%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
 Frame = -2

Query: 170 DNS-YNIPTGGTPITPSDYSSVNEN--GTSDSKAGRPSTYMQPPSPWLNQRPSLDVNVA 3
           DNS YNIPTG     PSDY S   +  G +D K  RP+ YMQ PSPW+NQRP LDVNVA
Sbjct: 114 DNSTYNIPTG-----PSDYPSSGNDTGGNADGKGARPAPYMQSPSPWMNQRPPLDVNVA 167


>ref|XP_003543527.1| PREDICTED: transcription initiation factor IIA large subunit-like
           isoform 1 [Glycine max]
          Length = 391

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/59 (61%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
 Frame = -2

Query: 170 DNS-YNIPTGGTPITPSDYSSVNEN--GTSDSKAGRPSTYMQPPSPWLNQRPSLDVNVA 3
           DNS YNIPTG     PSDY S   +  G +D K  RP+ YMQ PSPW+NQRP LDVNVA
Sbjct: 114 DNSTYNIPTG-----PSDYPSSGNDTGGNADGKGARPAPYMQSPSPWMNQRPPLDVNVA 167


>gb|AFW77526.1| transcription factor/ transcription initiation factor [Zea mays]
          Length = 438

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/57 (57%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
 Frame = -2

Query: 161 YNIPTGGTPITPSDYSSVNENGT---SDSKAGRPSTYMQPPSPWLNQRP-SLDVNVA 3
           YNIPTG +   PS  S +    T   +D KAGRPS YM PPSPW+NQRP  +DVNVA
Sbjct: 165 YNIPTGPSDYAPSPISDIRNGMTINGADPKAGRPSPYMPPPSPWMNQRPLGVDVNVA 221


>gb|AFW77525.1| hypothetical protein ZEAMMB73_875019 [Zea mays]
          Length = 322

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/57 (57%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
 Frame = -2

Query: 161 YNIPTGGTPITPSDYSSVNENGT---SDSKAGRPSTYMQPPSPWLNQRP-SLDVNVA 3
           YNIPTG +   PS  S +    T   +D KAGRPS YM PPSPW+NQRP  +DVNVA
Sbjct: 165 YNIPTGPSDYAPSPISDIRNGMTINGADPKAGRPSPYMPPPSPWMNQRPLGVDVNVA 221


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