BLASTX nr result

ID: Atractylodes22_contig00000118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000118
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloro...   136   4e-30
ref|XP_002329074.1| predicted protein [Populus trichocarpa] gi|2...   132   8e-29
ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus...   131   2e-28
gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK4693...   130   4e-28
ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycin...   129   7e-28

>ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Vitis
           vinifera] gi|302142967|emb|CBI20262.3| unnamed protein
           product [Vitis vinifera]
          Length = 183

 Score =  136 bits (343), Expect = 4e-30
 Identities = 73/111 (65%), Positives = 81/111 (72%)
 Frame = -2

Query: 505 SIVCEAGAGKKPDSXXXXXXXXXXXRLYNKARKSEVRTRMKKVLEELDVLRKKPEAQPEE 326
           SIVC+A   +K DS           R+YNKARKSE+RTRMKKVLEELD L+KKP+AQ EE
Sbjct: 66  SIVCDAAPMRKADSAAKRVRQAEKRRIYNKARKSEIRTRMKKVLEELDGLKKKPDAQAEE 125

Query: 325 VIGIEKLIAEAYSVIDKAVQVGTLHRNTGXXXXXXXXXXXXAVEIHHGWYT 173
           V+ IEKLIAEAYSVIDKAV+VGTLHRNTG            AVEIHHGWYT
Sbjct: 126 VLPIEKLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWYT 176


>ref|XP_002329074.1| predicted protein [Populus trichocarpa] gi|222869743|gb|EEF06874.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  132 bits (332), Expect = 8e-29
 Identities = 72/113 (63%), Positives = 81/113 (71%)
 Frame = -2

Query: 511 SISIVCEAGAGKKPDSXXXXXXXXXXXRLYNKARKSEVRTRMKKVLEELDVLRKKPEAQP 332
           + SIVCE+   KK DS           R+YNKARKSEV+TRMKKVLE LD L+KKPEAQ 
Sbjct: 61  NFSIVCESTPKKKADSAEKRTRQAEKRRVYNKARKSEVKTRMKKVLEALDDLKKKPEAQF 120

Query: 331 EEVIGIEKLIAEAYSVIDKAVQVGTLHRNTGXXXXXXXXXXXXAVEIHHGWYT 173
           EEV+ IEKLIAEAYSVIDKA++VGTLHRNTG            AVEIHHGWY+
Sbjct: 121 EEVLPIEKLIAEAYSVIDKAIKVGTLHRNTGARRKSRLARRKKAVEIHHGWYS 173


>ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus communis]
           gi|223528058|gb|EEF30134.1| 30S ribosomal protein S20,
           putative [Ricinus communis]
          Length = 185

 Score =  131 bits (329), Expect = 2e-28
 Identities = 75/121 (61%), Positives = 83/121 (68%)
 Frame = -2

Query: 535 ILGRRVGRSISIVCEAGAGKKPDSXXXXXXXXXXXRLYNKARKSEVRTRMKKVLEELDVL 356
           I+ R +G SI  VCEA   K+ DS           R+Y+KA KSEVRTRMKKVLE LD L
Sbjct: 58  IVKRPIGHSI--VCEAAPKKRADSAAKRARQAEKRRIYHKAHKSEVRTRMKKVLEALDDL 115

Query: 355 RKKPEAQPEEVIGIEKLIAEAYSVIDKAVQVGTLHRNTGXXXXXXXXXXXXAVEIHHGWY 176
           RKK +AQ EEV+ IEKLIAEAYSVIDKAV+VGTLHRNTG            AVEIHHGWY
Sbjct: 116 RKKSDAQAEEVLPIEKLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWY 175

Query: 175 T 173
           T
Sbjct: 176 T 176


>gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK46938.1| unknown
           [Lotus japonicus]
          Length = 177

 Score =  130 bits (326), Expect = 4e-28
 Identities = 69/128 (53%), Positives = 85/128 (66%)
 Frame = -2

Query: 556 GLVSVNPILGRRVGRSISIVCEAGAGKKPDSXXXXXXXXXXXRLYNKARKSEVRTRMKKV 377
           G +S++P+  R +     +VCE    KK DS           R+YNKARKSE++TRMKKV
Sbjct: 48  GSLSLSPVQRRTL-----VVCEVVTKKKVDSAIKRARQAEKRRIYNKARKSEIKTRMKKV 102

Query: 376 LEELDVLRKKPEAQPEEVIGIEKLIAEAYSVIDKAVQVGTLHRNTGXXXXXXXXXXXXAV 197
           LE L+ L+KK +AQPEE++ IEKLI EAYSVIDKA++VGTLHRNTG             V
Sbjct: 103 LEALESLKKKSDAQPEEILPIEKLIGEAYSVIDKAIRVGTLHRNTGGHRKSRLARRKKVV 162

Query: 196 EIHHGWYT 173
           EIHHGWYT
Sbjct: 163 EIHHGWYT 170


>ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycine max]
           gi|255625577|gb|ACU13133.1| unknown [Glycine max]
          Length = 180

 Score =  129 bits (324), Expect = 7e-28
 Identities = 68/114 (59%), Positives = 79/114 (69%)
 Frame = -2

Query: 514 RSISIVCEAGAGKKPDSXXXXXXXXXXXRLYNKARKSEVRTRMKKVLEELDVLRKKPEAQ 335
           R  S+VCEA   KK DS           R+YNKARKSE++TR KKVLE L+VL+KK +AQ
Sbjct: 60  RRASVVCEAAPKKKVDSAVKRARQAEKHRVYNKARKSEIKTRTKKVLEALEVLKKKSDAQ 119

Query: 334 PEEVIGIEKLIAEAYSVIDKAVQVGTLHRNTGXXXXXXXXXXXXAVEIHHGWYT 173
            EE++ IEKLI EAYS+IDKAV+VGTLHRNTG            AVEIHHGWYT
Sbjct: 120 AEEILPIEKLIGEAYSIIDKAVRVGTLHRNTGANRKSRLARRKKAVEIHHGWYT 173


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