BLASTX nr result

ID: Atractylodes22_contig00000062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000062
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]         162   2e-38
gb|ACS68717.1| photosystem I subunit XI [Sonneratia alba] gi|241...   159   3e-37
gb|AFW90576.1| photosystem I subunit XI Mrna (chloroplast) [Sola...   154   6e-36
ref|XP_002527284.1| Photosystem I reaction center subunit XI, ch...   152   3e-35
sp|Q41385.1|PSAL_SPIOL RecName: Full=Photosystem I reaction cent...   152   4e-35

>gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]
          Length = 220

 Score =  162 bits (411), Expect = 2e-38
 Identities = 76/91 (83%), Positives = 84/91 (92%)
 Frame = +3

Query: 27  VAPKGISGSPLRVFPSSKRSSSTIKAVQTDKPTYQVIQPINGDPFIGSLETPVTSSPLIA 206
           V PKGISGSP ++FPS+++S  TIKAVQTDKPTYQVIQP+NGDPFIGSLETPVTSSPLIA
Sbjct: 27  VTPKGISGSPFKIFPSTRKSCFTIKAVQTDKPTYQVIQPLNGDPFIGSLETPVTSSPLIA 86

Query: 207 WYLSNLPGYRTAVSPLLRGIEVGLTHGFFLV 299
           WYLSNLP YRTAV+PLLRG+EVGL HGF LV
Sbjct: 87  WYLSNLPAYRTAVNPLLRGVEVGLAHGFLLV 117


>gb|ACS68717.1| photosystem I subunit XI [Sonneratia alba]
           gi|241865512|gb|ACS68788.1| photosystem I subunit XI
           [Sonneratia alba]
          Length = 103

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/91 (82%), Positives = 83/91 (91%)
 Frame = +3

Query: 27  VAPKGISGSPLRVFPSSKRSSSTIKAVQTDKPTYQVIQPINGDPFIGSLETPVTSSPLIA 206
           +APKGISGSPL+ FPS + +S TI+AVQ DKPT+QVIQPINGDPFIGSLETPVTSSPLIA
Sbjct: 5   IAPKGISGSPLQAFPSRRTASLTIRAVQADKPTFQVIQPINGDPFIGSLETPVTSSPLIA 64

Query: 207 WYLSNLPGYRTAVSPLLRGIEVGLTHGFFLV 299
           WYLSNLP YRT+VSPLLRG+EVGL HGF LV
Sbjct: 65  WYLSNLPAYRTSVSPLLRGVEVGLAHGFLLV 95


>gb|AFW90576.1| photosystem I subunit XI Mrna (chloroplast) [Solanum tuberosum]
          Length = 213

 Score =  154 bits (390), Expect = 6e-36
 Identities = 71/91 (78%), Positives = 81/91 (89%)
 Frame = +3

Query: 27  VAPKGISGSPLRVFPSSKRSSSTIKAVQTDKPTYQVIQPINGDPFIGSLETPVTSSPLIA 206
           V PKGISG+P ++FPS+++S  T+KAVQ DKPT+QVIQP+NGDPFIGS ETPVTSSPLIA
Sbjct: 27  VTPKGISGAPFKIFPSTRKSCFTVKAVQADKPTFQVIQPLNGDPFIGSPETPVTSSPLIA 86

Query: 207 WYLSNLPGYRTAVSPLLRGIEVGLTHGFFLV 299
           WYLSNLP YRTAV PLLRG+EVGL HGF LV
Sbjct: 87  WYLSNLPAYRTAVDPLLRGVEVGLAHGFLLV 117


>ref|XP_002527284.1| Photosystem I reaction center subunit XI, chloroplast precursor,
           putative [Ricinus communis] gi|223533377|gb|EEF35128.1|
           Photosystem I reaction center subunit XI, chloroplast
           precursor, putative [Ricinus communis]
          Length = 218

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/89 (79%), Positives = 81/89 (91%)
 Frame = +3

Query: 33  PKGISGSPLRVFPSSKRSSSTIKAVQTDKPTYQVIQPINGDPFIGSLETPVTSSPLIAWY 212
           P+GISG+P RV P+ + +S T+KA+Q++KPT+QVIQPINGDPFIGSLETPVTSSPLIAWY
Sbjct: 27  PRGISGNPFRVSPAKRATSFTVKAIQSEKPTFQVIQPINGDPFIGSLETPVTSSPLIAWY 86

Query: 213 LSNLPGYRTAVSPLLRGIEVGLTHGFFLV 299
           LSNLP YRTAVSPLLRGIEVGL HGF LV
Sbjct: 87  LSNLPAYRTAVSPLLRGIEVGLAHGFLLV 115


>sp|Q41385.1|PSAL_SPIOL RecName: Full=Photosystem I reaction center subunit XI,
           chloroplastic; Short=PSI-L; AltName: Full=PSI subunit V;
           Flags: Precursor gi|268612155|pdb|2WSC|L Chain L,
           Improved Model Of Plant Photosystem I
           gi|268612173|pdb|2WSE|L Chain L, Improved Model Of Plant
           Photosystem I gi|268612191|pdb|2WSF|L Chain L, Improved
           Model Of Plant Photosystem I gi|396275|emb|CAA45775.1|
           subunit XI of photosystem I reaction center [Spinacia
           oleracea]
          Length = 216

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/100 (74%), Positives = 84/100 (84%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   SSLTTTRPVAPKGISGSPLRVFPSSKRSSS-TIKAVQTDKPTYQVIQPINGDPFIGSLET 179
           S  TT   V PKGISG  LR FPS +R +S T++A++T+KPTYQVIQP+NGDPFIG LET
Sbjct: 14  SGFTTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQPLNGDPFIGGLET 73

Query: 180 PVTSSPLIAWYLSNLPGYRTAVSPLLRGIEVGLTHGFFLV 299
           PVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGL HGF LV
Sbjct: 74  PVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLV 113


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