BLASTX nr result

ID: Atractylodes22_contig00000058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000058
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]    79   2e-25
ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...    79   2e-25
emb|CBI16626.3| unnamed protein product [Vitis vinifera]               79   2e-25
ref|XP_002326828.1| chromatin remodeling complex subunit [Populu...    78   2e-24
ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Popu...    76   6e-24

>emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]
          Length = 1054

 Score = 78.6 bits (192), Expect(2) = 2e-25
 Identities = 42/53 (79%), Positives = 44/53 (83%)
 Frame = +2

Query: 500 RVEERFAAIRSFSRQSVVGDSNSEADYDSAFVFMISTRAGGVGLNLVAADTVI 658
           R EERF+AIRSFSRQ V G  NS+    SAFVFMISTRAGGVGLNLVAADTVI
Sbjct: 496 RAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGVGLNLVAADTVI 548



 Score = 64.3 bits (155), Expect(2) = 2e-25
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +1

Query: 391 EASGKIIVLDQLLQKLRNSGHRVLLFAQMIHTLDVL 498
           +ASGK+I+LDQLLQKL NSGHRVLLFAQM HTLD+L
Sbjct: 442 QASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDIL 477


>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
           vinifera]
          Length = 876

 Score = 78.6 bits (192), Expect(2) = 2e-25
 Identities = 42/53 (79%), Positives = 44/53 (83%)
 Frame = +2

Query: 500 RVEERFAAIRSFSRQSVVGDSNSEADYDSAFVFMISTRAGGVGLNLVAADTVI 658
           R EERF+AIRSFSRQ V G  NS+    SAFVFMISTRAGGVGLNLVAADTVI
Sbjct: 416 RAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGVGLNLVAADTVI 468



 Score = 64.3 bits (155), Expect(2) = 2e-25
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +1

Query: 391 EASGKIIVLDQLLQKLRNSGHRVLLFAQMIHTLDVL 498
           +ASGK+I+LDQLLQKL NSGHRVLLFAQM HTLD+L
Sbjct: 362 QASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDIL 397


>emb|CBI16626.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score = 78.6 bits (192), Expect(2) = 2e-25
 Identities = 42/53 (79%), Positives = 44/53 (83%)
 Frame = +2

Query: 500 RVEERFAAIRSFSRQSVVGDSNSEADYDSAFVFMISTRAGGVGLNLVAADTVI 658
           R EERF+AIRSFSRQ V G  NS+    SAFVFMISTRAGGVGLNLVAADTVI
Sbjct: 415 RAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGVGLNLVAADTVI 467



 Score = 64.3 bits (155), Expect(2) = 2e-25
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +1

Query: 391 EASGKIIVLDQLLQKLRNSGHRVLLFAQMIHTLDVL 498
           +ASGK+I+LDQLLQKL NSGHRVLLFAQM HTLD+L
Sbjct: 361 QASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDIL 396


>ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222835143|gb|EEE73578.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 866

 Score = 77.8 bits (190), Expect(2) = 2e-24
 Identities = 43/53 (81%), Positives = 46/53 (86%)
 Frame = +2

Query: 500 RVEERFAAIRSFSRQSVVGDSNSEADYDSAFVFMISTRAGGVGLNLVAADTVI 658
           R EERFAAIRSFS QS  G S SE+D +S+FVFMISTRAGGVGLNLVAADTVI
Sbjct: 412 RAEERFAAIRSFSGQS--GRSGSESDQNSSFVFMISTRAGGVGLNLVAADTVI 462



 Score = 61.6 bits (148), Expect(2) = 2e-24
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = +1

Query: 391 EASGKIIVLDQLLQKLRNSGHRVLLFAQMIHTLDVL 498
           +ASGK+I+LDQLL+KL +SGHRVLLFAQM HTLD+L
Sbjct: 358 KASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDIL 393


>ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Populus trichocarpa]
           gi|222835142|gb|EEE73577.1| hypothetical protein
           POPTRDRAFT_781297 [Populus trichocarpa]
          Length = 485

 Score = 76.3 bits (186), Expect(2) = 6e-24
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = +2

Query: 500 RVEERFAAIRSFSRQSVVGDSNSEADYDSAFVFMISTRAGGVGLNLVAADTV 655
           R EERFAAIRSFS QS  G S SE+D +S+FVFMISTRAGGVGLNLVAADTV
Sbjct: 421 RAEERFAAIRSFSGQS--GRSGSESDQNSSFVFMISTRAGGVGLNLVAADTV 470



 Score = 61.6 bits (148), Expect(2) = 6e-24
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = +1

Query: 391 EASGKIIVLDQLLQKLRNSGHRVLLFAQMIHTLDVL 498
           +ASGK+I+LDQLL+KL +SGHRVLLFAQM HTLD+L
Sbjct: 367 KASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDIL 402


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