BLASTX nr result

ID: Atractylodes22_contig00000053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000053
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93021.1| unknown [Populus trichocarpa]                           75   6e-12
dbj|BAH58381.1| AtEB1b-like protein [Nicotiana tabacum]                72   5e-11
ref|NP_190353.3| microtubule end binding protein EB1A [Arabidops...    71   8e-11
ref|XP_002875859.1| ATEB1A [Arabidopsis lyrata subsp. lyrata] gi...    70   1e-10
ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09

>gb|ABK93021.1| unknown [Populus trichocarpa]
          Length = 276

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/66 (59%), Positives = 47/66 (71%)
 Frame = -1

Query: 204 VNGGIMNGNYNPVERRSKLYKARSFKGSQKNSKSLQTKNSHNPDSGNGHRISKIAGAKQR 25
           VNGGIMN NYNPVERRSK  K R+ KGSQK +KSLQ  N HN  SG+   ++K++G KQ 
Sbjct: 117 VNGGIMNENYNPVERRSKGGKDRNSKGSQKTTKSLQANNLHNSASGDTVDLNKMSGPKQG 176

Query: 24  KTGVVA 7
           +   VA
Sbjct: 177 RGSAVA 182


>dbj|BAH58381.1| AtEB1b-like protein [Nicotiana tabacum]
          Length = 267

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/65 (56%), Positives = 47/65 (72%)
 Frame = -1

Query: 204 VNGGIMNGNYNPVERRSKLYKARSFKGSQKNSKSLQTKNSHNPDSGNGHRISKIAGAKQR 25
           VNGGIMN NYN ++RRSK+ K R+ KGSQ+ +KSLQT N HNP  G G  I++I G KQ 
Sbjct: 116 VNGGIMNENYNALDRRSKVGKERNVKGSQRYAKSLQTNNCHNP--GLGEDITRITGIKQG 173

Query: 24  KTGVV 10
           ++  V
Sbjct: 174 RSSPV 178


>ref|NP_190353.3| microtubule end binding protein EB1A [Arabidopsis thaliana]
           gi|75232671|sp|Q7XJ60.1|EB1A_ARATH RecName:
           Full=Microtubule-associated protein RP/EB family member
           1A; AltName: Full=APC-binding protein EB1A; AltName:
           Full=End-binding protein 1A; Short=AtEB1A; AltName:
           Full=Protein ATEB1 homolog 2; Short=AtEB1H2
           gi|32815913|gb|AAP88341.1| At3g47690 [Arabidopsis
           thaliana] gi|110735727|dbj|BAE99843.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332644798|gb|AEE78319.1| microtubule end binding
           protein EB1A [Arabidopsis thaliana]
          Length = 276

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/65 (55%), Positives = 43/65 (66%)
 Frame = -1

Query: 204 VNGGIMNGNYNPVERRSKLYKARSFKGSQKNSKSLQTKNSHNPDSGNGHRISKIAGAKQR 25
           +NGGIMN NYNPVERRS+  K RS KGS K  KSLQT N+H P + +   +SK +G K  
Sbjct: 117 INGGIMNENYNPVERRSRNGKERSVKGSNKIPKSLQTNNNHPPPNSSSVGLSKASGPKSA 176

Query: 24  KTGVV 10
           K   V
Sbjct: 177 KAAEV 181


>ref|XP_002875859.1| ATEB1A [Arabidopsis lyrata subsp. lyrata]
           gi|297321697|gb|EFH52118.1| ATEB1A [Arabidopsis lyrata
           subsp. lyrata]
          Length = 275

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/65 (55%), Positives = 42/65 (64%)
 Frame = -1

Query: 204 VNGGIMNGNYNPVERRSKLYKARSFKGSQKNSKSLQTKNSHNPDSGNGHRISKIAGAKQR 25
           +NGGIMN NYNPVERRS+  K RS KGS K  KSLQT N+H P +     +SK +G K  
Sbjct: 117 INGGIMNENYNPVERRSRNGKERSVKGSNKIPKSLQTNNNHPPPNSGSVGLSKASGPKPA 176

Query: 24  KTGVV 10
           K   V
Sbjct: 177 KAAEV 181


>ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|222859277|gb|EEE96824.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/56 (60%), Positives = 41/56 (73%)
 Frame = -1

Query: 204 VNGGIMNGNYNPVERRSKLYKARSFKGSQKNSKSLQTKNSHNPDSGNGHRISKIAG 37
           VNGGIMN NYNPVERRSK  K R+ KGSQK +KSLQ  N HN  S +   ++K++G
Sbjct: 117 VNGGIMNENYNPVERRSKGGKDRNSKGSQKTTKSLQANNLHNSASSDTVDLNKMSG 172


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