BLASTX nr result

ID: Atractylodes22_contig00000031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000031
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction cent...   339   6e-91
gb|AFW90599.1| photosystem I subunit III precursor (chloroplast)...   287   3e-75
gb|AAP03872.1| putative photosystem I subunit III precursor [Nic...   284   2e-74
gb|AFK41712.1| unknown [Medicago truncatula]                          279   7e-73
gb|ACJ83279.1| unknown [Medicago truncatula]                          276   6e-72

>sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction center subunit III,
           chloroplastic; AltName: Full=Light-harvesting complex I
           17 kDa protein; AltName: Full=PSI-F; Flags: Precursor
           gi|168173|gb|AAA33344.1| photosystem I subunit III
           [Flaveria trinervia] gi|298482|gb|AAB25669.1|
           photosystem I reaction center subunit III, PSI-RC PsaF
           [Flaveria trinervia, Peptide, 232 aa]
          Length = 232

 Score =  339 bits (870), Expect = 6e-91
 Identities = 173/232 (74%), Positives = 184/232 (79%), Gaps = 3/232 (1%)
 Frame = +2

Query: 173 MAFTISTSFFQPLEVSNLKFG---SRSKLTSTSIVCSGATEDGSKGIDGKGXXXXXXXXX 343
           M+FTISTSF QPLE+SNLK     S+SK+TSTSIVCSG+T++     DGK          
Sbjct: 1   MSFTISTSFLQPLEISNLKSSPITSKSKVTSTSIVCSGSTDEKINNADGKSSLKALSAAL 60

Query: 344 XXXXXXXXXTVPALPALADISGLTPCKDSKQFAKRXXXXXXXXXXXXXXYAPDSAPALAI 523
                    TVPALPA ADISGLTPCK+SKQFAKR              YAPDSAPALAI
Sbjct: 61  ALSSILVSSTVPALPASADISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAI 120

Query: 524 KATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 703
           KATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR
Sbjct: 121 KATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 180

Query: 704 SYLIAIRDEKKPTQKEIIIDVPLASRLVFRGFIWPVAAYRELLNGELIDPAV 859
           SYLIAIRDEKKPTQKEIIIDVPLA++L+FRGF WPVAAYRE LNGELIDP V
Sbjct: 181 SYLIAIRDEKKPTQKEIIIDVPLATKLLFRGFSWPVAAYREYLNGELIDPTV 232


>gb|AFW90599.1| photosystem I subunit III precursor (chloroplast) [Solanum
           tuberosum]
          Length = 228

 Score =  287 bits (734), Expect = 3e-75
 Identities = 152/238 (63%), Positives = 172/238 (72%), Gaps = 9/238 (3%)
 Frame = +2

Query: 173 MAFTISTSFFQPLEVSNLKFGSR--SKLTSTSIVCSG-------ATEDGSKGIDGKGXXX 325
           M+ TI T+  +P+  S  KFGS+  +K  +++IVCS        +TE+ S  +       
Sbjct: 1   MSLTIPTNLSKPISTS--KFGSQFTTKPRTSAIVCSSNQTPVSNSTEESSSSLKA----- 53

Query: 326 XXXXXXXXXXXXXXXTVPALPALADISGLTPCKDSKQFAKRXXXXXXXXXXXXXXYAPDS 505
                          + P LPA ADISGLTPCKDSKQFAKR              Y+PDS
Sbjct: 54  ---FSAALALSSILLSAPVLPASADISGLTPCKDSKQFAKREKQQIKKLESSLKLYSPDS 110

Query: 506 APALAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGW 685
           APALAI AT+EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGW
Sbjct: 111 APALAINATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGW 170

Query: 686 IGWVGRSYLIAIRDEKKPTQKEIIIDVPLASRLVFRGFIWPVAAYRELLNGELIDPAV 859
           IGWVGRSYLIA+RD+KKPT KEIIIDVPLA+RLV+RGFIWPVAAYRE LNG+LIDP V
Sbjct: 171 IGWVGRSYLIAVRDDKKPTMKEIIIDVPLANRLVWRGFIWPVAAYREYLNGDLIDPNV 228


>gb|AAP03872.1| putative photosystem I subunit III precursor [Nicotiana tabacum]
          Length = 222

 Score =  284 bits (727), Expect = 2e-74
 Identities = 145/227 (63%), Positives = 164/227 (72%)
 Frame = +2

Query: 173 MAFTISTSFFQPLEVSNLKFGSRSKLTSTSIVCSGATEDGSKGIDGKGXXXXXXXXXXXX 352
           M+ TI T+  +P+   N +F  + +  +  IVCS      S   D +             
Sbjct: 1   MSLTIPTNLSKPISTLNSQFTKKPRFAT--IVCSS-----SSSCDEQSSCNLKAFSAALA 53

Query: 353 XXXXXXTVPALPALADISGLTPCKDSKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKAT 532
                 +VP LPA ADISGLTPCK+SKQFAKR              YAPDSAPALAI+AT
Sbjct: 54  LSSVLLSVPVLPASADISGLTPCKESKQFAKREKQQIKKLESSLKLYAPDSAPALAIQAT 113

Query: 533 MEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYL 712
           +EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYL
Sbjct: 114 VEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYL 173

Query: 713 IAIRDEKKPTQKEIIIDVPLASRLVFRGFIWPVAAYRELLNGELIDP 853
           IA+RD+KKPT KEIIIDVPLA++L++RGF WPVAAYRE LNGELIDP
Sbjct: 174 IAVRDDKKPTMKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELIDP 220


>gb|AFK41712.1| unknown [Medicago truncatula]
          Length = 224

 Score =  279 bits (714), Expect = 7e-73
 Identities = 144/225 (64%), Positives = 161/225 (71%)
 Frame = +2

Query: 173 MAFTISTSFFQPLEVSNLKFGSRSKLTSTSIVCSGATEDGSKGIDGKGXXXXXXXXXXXX 352
           M+ TI T+  +P      K   + KL++  I CS   E  +  ++               
Sbjct: 1   MSLTIPTNLSKPTSTLRPKLPQKPKLSTNIIHCSTNQEKPTNDVNSN-----LKAFSAAL 55

Query: 353 XXXXXXTVPALPALADISGLTPCKDSKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKAT 532
                     LPA+ADISGLTPC++SKQFAKR              YAPDSAPALAIKAT
Sbjct: 56  ALSSILISSPLPAVADISGLTPCRESKQFAKREKQSIKKLESSLKLYAPDSAPALAIKAT 115

Query: 533 MEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYL 712
           +EKTKRRFDNYGKQGLLCG+DGLPHLIV+GDQRHWGEFITPGILFLYIAGWIGWVGRSYL
Sbjct: 116 VEKTKRRFDNYGKQGLLCGADGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYL 175

Query: 713 IAIRDEKKPTQKEIIIDVPLASRLVFRGFIWPVAAYRELLNGELI 847
           IAIRDEKKPTQKEIIIDVPLASRLVFRGF WP+AAYREL+NGELI
Sbjct: 176 IAIRDEKKPTQKEIIIDVPLASRLVFRGFSWPIAAYRELVNGELI 220


>gb|ACJ83279.1| unknown [Medicago truncatula]
          Length = 224

 Score =  276 bits (706), Expect = 6e-72
 Identities = 143/225 (63%), Positives = 160/225 (71%)
 Frame = +2

Query: 173 MAFTISTSFFQPLEVSNLKFGSRSKLTSTSIVCSGATEDGSKGIDGKGXXXXXXXXXXXX 352
           M+ TI T+  +P      K   + KL++  I CS   E  +  ++               
Sbjct: 1   MSLTIPTNLSKPTSTLRPKLPQKPKLSTNIIHCSTNQEKPTNDVNSN-----LKAFSAAL 55

Query: 353 XXXXXXTVPALPALADISGLTPCKDSKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKAT 532
                     LPA+ADISGLTPC++SKQFAKR              YAPDSAPALAIKAT
Sbjct: 56  ALSSILISSPLPAVADISGLTPCRESKQFAKREKQSIKKLESSLKLYAPDSAPALAIKAT 115

Query: 533 MEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYL 712
           +EKTKRRFDNYGKQGLLCG+DGLPHLIV+GDQRHWGEFITPGILFLYIAGWIGWVGRSYL
Sbjct: 116 VEKTKRRFDNYGKQGLLCGADGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYL 175

Query: 713 IAIRDEKKPTQKEIIIDVPLASRLVFRGFIWPVAAYRELLNGELI 847
           IAIRDEKKPTQKEIIIDV LASRLVFRGF WP+AAYREL+NGELI
Sbjct: 176 IAIRDEKKPTQKEIIIDVTLASRLVFRGFSWPIAAYRELVNGELI 220


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