BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000010
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_620566.1| polyprotein [Satsuma dwarf virus] gi|81979373|s...   374   e-119
ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus]             374   e-119
ref|NP_599086.1| polyprotein [Strawberry mottle virus] gi|181039...   138   3e-30
ref|NP_733951.1| helicase [Strawberry mottle virus]                   136   8e-30
ref|YP_004936170.1| unnamed protein product [Chocolate lily viru...   132   1e-28

>ref|NP_620566.1| polyprotein [Satsuma dwarf virus] gi|81979373|sp|Q9WAL8.1|POL1_SDVS5
            RecName: Full=RNA1 polyprotein; AltName: Full=P1;
            Contains: RecName: Full=Putative helicase; AltName:
            Full=Putative NTP-binding protein; Contains: RecName:
            Full=Probable picornain 3C-like protease; Short=3C-like
            protease; Contains: RecName: Full=Probable RNA-directed
            RNA polymerase gi|4589400|dbj|BAA76746.1| polyprotein
            [Satsuma dwarf virus]
          Length = 2081

 Score =  374 bits (961), Expect(2) = e-119
 Identities = 187/278 (67%), Positives = 208/278 (74%)
 Frame = -2

Query: 847  SSGVNTAKWMEDVAQLHLDVHQSTICVPDLLERARRLIETGDALXXXXXXXXXXXXXXXX 668
            SSG+NT  W+E VA  H DVH S IC+PDLL RAR+LIETGD +                
Sbjct: 645  SSGINTCGWLEKVAAFHSDVHSSQICIPDLLLRARQLIETGDTISDLLSNSTVSLSFLLR 704

Query: 667  XXXXXXXXXXXXXXXXXXXXXXXXXKLAYKSLREDHVQLQLAVDVSTKTSCPFVLFFAGE 488
                                     KLA + L+EDH QLQLAVDVS  + CPFVLFFAG+
Sbjct: 705  ERI----------------------KLALRELKEDHTQLQLAVDVSVSSECPFVLFFAGD 742

Query: 487  SGVGKSTAMSKFREDVLDDLGYPKIARFFSRNPGEKHWAGYLRHTAVIYDDFAQVPQAEN 308
            SGVGKSTAM KFRE+VLD LGYPK ARF+ RNPGEK W+GYLRHTAVIYDDFAQ+PQ + 
Sbjct: 743  SGVGKSTAMKKFREEVLDKLGYPKTARFYPRNPGEKFWSGYLRHTAVIYDDFAQIPQGDM 802

Query: 307  TYDESELIRIVTNSIVTVPMAIAEEKGRTFRSKFIFACTNRYCESEDAPLADVMAFRRRR 128
            TYDE+ELIRIVTN++VTVPMAIAEEKGRTFRSKF+FACTNRYCESEDAPLAD MAFRRRR
Sbjct: 803  TYDEAELIRIVTNAVVTVPMAIAEEKGRTFRSKFVFACTNRYCESEDAPLADEMAFRRRR 862

Query: 127  HLYIHVSRKAGVEPGPTGTDNLLFSEMDNRQSDGEPAF 14
            HLYIHV+RK GVEPGP G DNL FSEMDNR S+GEPA+
Sbjct: 863  HLYIHVARKPGVEPGPRGVDNLEFSEMDNRDSNGEPAY 900



 Score = 83.2 bits (204), Expect(2) = e-119
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -1

Query: 1106 DAEERSGFSVLSLLGAIVGLQTLLPTNLSKFSWDCGKWAQTFKSGF 969
            D EERSGFSVLS++GAI  LQ+LLP N+S+FSWDCGKWAQTFK+GF
Sbjct: 562  DGEERSGFSVLSMMGAICALQSLLPANVSRFSWDCGKWAQTFKTGF 607


>ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus]
          Length = 1190

 Score =  374 bits (961), Expect(2) = e-119
 Identities = 187/278 (67%), Positives = 208/278 (74%)
 Frame = -2

Query: 847  SSGVNTAKWMEDVAQLHLDVHQSTICVPDLLERARRLIETGDALXXXXXXXXXXXXXXXX 668
            SSG+NT  W+E VA  H DVH S IC+PDLL RAR+LIETGD +                
Sbjct: 645  SSGINTCGWLEKVAAFHSDVHSSQICIPDLLLRARQLIETGDTISDLLSNSTVSLSFLLR 704

Query: 667  XXXXXXXXXXXXXXXXXXXXXXXXXKLAYKSLREDHVQLQLAVDVSTKTSCPFVLFFAGE 488
                                     KLA + L+EDH QLQLAVDVS  + CPFVLFFAG+
Sbjct: 705  ERI----------------------KLALRELKEDHTQLQLAVDVSVSSECPFVLFFAGD 742

Query: 487  SGVGKSTAMSKFREDVLDDLGYPKIARFFSRNPGEKHWAGYLRHTAVIYDDFAQVPQAEN 308
            SGVGKSTAM KFRE+VLD LGYPK ARF+ RNPGEK W+GYLRHTAVIYDDFAQ+PQ + 
Sbjct: 743  SGVGKSTAMKKFREEVLDKLGYPKTARFYPRNPGEKFWSGYLRHTAVIYDDFAQIPQGDM 802

Query: 307  TYDESELIRIVTNSIVTVPMAIAEEKGRTFRSKFIFACTNRYCESEDAPLADVMAFRRRR 128
            TYDE+ELIRIVTN++VTVPMAIAEEKGRTFRSKF+FACTNRYCESEDAPLAD MAFRRRR
Sbjct: 803  TYDEAELIRIVTNAVVTVPMAIAEEKGRTFRSKFVFACTNRYCESEDAPLADEMAFRRRR 862

Query: 127  HLYIHVSRKAGVEPGPTGTDNLLFSEMDNRQSDGEPAF 14
            HLYIHV+RK GVEPGP G DNL FSEMDNR S+GEPA+
Sbjct: 863  HLYIHVARKPGVEPGPRGVDNLEFSEMDNRDSNGEPAY 900



 Score = 83.2 bits (204), Expect(2) = e-119
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -1

Query: 1106 DAEERSGFSVLSLLGAIVGLQTLLPTNLSKFSWDCGKWAQTFKSGF 969
            D EERSGFSVLS++GAI  LQ+LLP N+S+FSWDCGKWAQTFK+GF
Sbjct: 562  DGEERSGFSVLSMMGAICALQSLLPANVSRFSWDCGKWAQTFKTGF 607


>ref|NP_599086.1| polyprotein [Strawberry mottle virus] gi|18103979|emb|CAC86396.1|
            polyprotein [Strawberry mottle virus]
          Length = 1915

 Score =  138 bits (347), Expect = 3e-30
 Identities = 85/247 (34%), Positives = 123/247 (49%)
 Frame = -2

Query: 844  SGVNTAKWMEDVAQLHLDVHQSTICVPDLLERARRLIETGDALXXXXXXXXXXXXXXXXX 665
            +G+    W  +V +L++D+   T    DL  RARRL E GD +                 
Sbjct: 428  TGIRFQDWCTEVEKLNIDMLNYTNLQDDLT-RARRLKEQGDKIQTHMMYSSESISFMMRE 486

Query: 664  XXXXXXXXXXXXXXXXXXXXXXXXKLAYKSLREDHVQLQLAVDVSTKTSCPFVLFFAGES 485
                                    + +  ++     + + AVD+S    CPF + F G +
Sbjct: 487  KL----------------------RASMTTIPTIIAKFEKAVDISGTRMCPFTVLFHGPA 524

Query: 484  GVGKSTAMSKFREDVLDDLGYPKIARFFSRNPGEKHWAGYLRHTAVIYDDFAQVPQAENT 305
            G GKS +M  F  DV++++  P + R + RN G+KHW+ YLR TA+ YD+FAQ       
Sbjct: 525  GSGKSNSMRGFMHDVMNEMEEPSVGRVYPRNSGDKHWSDYLRQTALYYDEFAQKKPCNGE 584

Query: 304  YDESELIRIVTNSIVTVPMAIAEEKGRTFRSKFIFACTNRYCESEDAPLADVMAFRRRRH 125
             DE ELI +V+ S   +  A  E+KG +F SK+IF C+NR   S +A LAD  AFRRRRH
Sbjct: 585  SDELELIPLVSCSHFPLVGAAIEDKGLSFNSKYIFMCSNRADVSSNAGLADNDAFRRRRH 644

Query: 124  LYIHVSR 104
            L + V+R
Sbjct: 645  LCVEVTR 651


>ref|NP_733951.1| helicase [Strawberry mottle virus]
          Length = 499

 Score =  136 bits (343), Expect = 8e-30
 Identities = 69/151 (45%), Positives = 95/151 (62%)
 Frame = -2

Query: 556 QLQLAVDVSTKTSCPFVLFFAGESGVGKSTAMSKFREDVLDDLGYPKIARFFSRNPGEKH 377
           + + AVD+S    CPF + F G +G GKS +M  F  DV++++  P + R + RN G+KH
Sbjct: 36  KFEKAVDISGTRMCPFTVLFHGPAGSGKSNSMRGFMHDVMNEMEEPSVGRVYPRNSGDKH 95

Query: 376 WAGYLRHTAVIYDDFAQVPQAENTYDESELIRIVTNSIVTVPMAIAEEKGRTFRSKFIFA 197
           W+ YLR TA+ YD+FAQ        DE ELI +V+ S   +  A  E+KG +F SK+IF 
Sbjct: 96  WSDYLRQTALYYDEFAQKKPCNGESDELELIPLVSCSHFPLVGAAIEDKGLSFNSKYIFM 155

Query: 196 CTNRYCESEDAPLADVMAFRRRRHLYIHVSR 104
           C+NR   S +A LAD  AFRRRRHL + V+R
Sbjct: 156 CSNRADVSSNAGLADNDAFRRRRHLCVEVTR 186


>ref|YP_004936170.1| unnamed protein product [Chocolate lily virus A]
            gi|359392828|gb|AEV45821.1| polyprotein [Chocolate lily
            virus A]
          Length = 1886

 Score =  132 bits (333), Expect = 1e-28
 Identities = 80/269 (29%), Positives = 126/269 (46%), Gaps = 1/269 (0%)
 Frame = -2

Query: 844  SGVNTAKWMEDVAQLHLDVHQSTICVPDLLERARRLIETGDALXXXXXXXXXXXXXXXXX 665
            +G+   +W+++  +L ++ + +T  + D++  AR L++ G  +                 
Sbjct: 386  TGIGVTEWIDNCEKLLVEGNSTTRHMQDIMSEARTLVDQGKTISQYLMQNDSGANYIFRQ 445

Query: 664  XXXXXXXXXXXXXXXXXXXXXXXXKLAYKSLREDHVQLQLAVDVSTKTSCPFVLFFAGES 485
                                        K L + +  L+ +   +   + PFV+ F G  
Sbjct: 446  KFVAVE----------------------KQLNDFYTSLKKSNLCNKYRATPFVITFMGGP 483

Query: 484  GVGKSTAMSKFREDVLDDLGYPKIARFFSRNPGEKHWAGYLRHTAVIYDDFAQVPQAENT 305
            G GKST    F E  LD++G  K+ R +SRN G+ +W+ Y R   V++DDF Q  Q    
Sbjct: 484  GTGKSTMARPFAEAFLDEMGESKVDRIYSRNGGDAYWSNYTRQPMVVFDDFGQTKQENGR 543

Query: 304  YDESELIRIVTNSIVTVPMAIAEEKGRTFRSKFIFACTNRYCESEDAPLADVMAFRRRRH 125
            +DE  LI++V+ +   +PMA  E+KGR F SK++  CTNR   +  A LA   AF RRRH
Sbjct: 544  FDEENLIQLVSCNPYMLPMAAVEDKGRPFDSKYMILCTNRTYANPGADLASEDAFLRRRH 603

Query: 124  LYIHVSRKAGVEPGPTGT-DNLLFSEMDN 41
            L   V +   V   P    DNLLF+  D+
Sbjct: 604  LVFEVHQNPDVPYNPAACYDNLLFTVKDS 632