BLASTX nr result

ID: Atractylodes22_contig00000008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000008
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus]             173   1e-41
ref|NP_620566.1| polyprotein [Satsuma dwarf virus] gi|81979373|s...   173   1e-41
ref|YP_004940018.1| unnamed protein product [Chocolate lily viru...    66   3e-09
ref|YP_004936170.1| unnamed protein product [Chocolate lily viru...    66   3e-09
ref|NP_733951.1| helicase [Strawberry mottle virus]                    62   6e-08

>ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus]
          Length = 1190

 Score =  173 bits (439), Expect = 1e-41
 Identities = 81/96 (84%), Positives = 90/96 (93%)
 Frame = +1

Query: 1    DESELIRIVTNSIVTVPMAIAEEKGRTFRSKFIFACTNRFCESEDAPLADVMAFRRRRHL 180
            DE+ELIRIVTN++VTVPMAIAEEKGRTFRSKF+FACTNR+CESEDAPLAD MAFRRRRHL
Sbjct: 805  DEAELIRIVTNAVVTVPMAIAEEKGRTFRSKFVFACTNRYCESEDAPLADEMAFRRRRHL 864

Query: 181  YVHVSRKAGVEPGPTGTDNLLFSEMDNRQSDGEPAF 288
            Y+HV+RK GVEPGP G DNL FSEMDNR S+GEPA+
Sbjct: 865  YIHVARKPGVEPGPRGVDNLEFSEMDNRDSNGEPAY 900


>ref|NP_620566.1| polyprotein [Satsuma dwarf virus] gi|81979373|sp|Q9WAL8.1|POL1_SDVS5
            RecName: Full=RNA1 polyprotein; AltName: Full=P1;
            Contains: RecName: Full=Putative helicase; AltName:
            Full=Putative NTP-binding protein; Contains: RecName:
            Full=Probable picornain 3C-like protease; Short=3C-like
            protease; Contains: RecName: Full=Probable RNA-directed
            RNA polymerase gi|4589400|dbj|BAA76746.1| polyprotein
            [Satsuma dwarf virus]
          Length = 2081

 Score =  173 bits (439), Expect = 1e-41
 Identities = 81/96 (84%), Positives = 90/96 (93%)
 Frame = +1

Query: 1    DESELIRIVTNSIVTVPMAIAEEKGRTFRSKFIFACTNRFCESEDAPLADVMAFRRRRHL 180
            DE+ELIRIVTN++VTVPMAIAEEKGRTFRSKF+FACTNR+CESEDAPLAD MAFRRRRHL
Sbjct: 805  DEAELIRIVTNAVVTVPMAIAEEKGRTFRSKFVFACTNRYCESEDAPLADEMAFRRRRHL 864

Query: 181  YVHVSRKAGVEPGPTGTDNLLFSEMDNRQSDGEPAF 288
            Y+HV+RK GVEPGP G DNL FSEMDNR S+GEPA+
Sbjct: 865  YIHVARKPGVEPGPRGVDNLEFSEMDNRDSNGEPAY 900


>ref|YP_004940018.1| unnamed protein product [Chocolate lily virus A]
          Length = 517

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   DESELIRIVTNSIVTVPMAIAEEKGRTFRSKFIFACTNRFCESEDAPLADVMAFRRRRHL 180
           DE  LI++V+ +   +PMA  E+KGR F SK++  CTNR   +  A LA   AF RRRHL
Sbjct: 121 DEENLIQLVSCNPYMLPMAAVEDKGRPFDSKYMILCTNRTYANPGADLASEDAFLRRRHL 180

Query: 181 YVHVSRKAGVEPGPTGT-DNLLFSEMDN 261
              V +   V   P    DNLLF+  D+
Sbjct: 181 VFEVHQNPDVPYNPAACYDNLLFTVKDS 208


>ref|YP_004936170.1| unnamed protein product [Chocolate lily virus A]
           gi|359392828|gb|AEV45821.1| polyprotein [Chocolate lily
           virus A]
          Length = 1886

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   DESELIRIVTNSIVTVPMAIAEEKGRTFRSKFIFACTNRFCESEDAPLADVMAFRRRRHL 180
           DE  LI++V+ +   +PMA  E+KGR F SK++  CTNR   +  A LA   AF RRRHL
Sbjct: 545 DEENLIQLVSCNPYMLPMAAVEDKGRPFDSKYMILCTNRTYANPGADLASEDAFLRRRHL 604

Query: 181 YVHVSRKAGVEPGPTGT-DNLLFSEMDN 261
              V +   V   P    DNLLF+  D+
Sbjct: 605 VFEVHQNPDVPYNPAACYDNLLFTVKDS 632


>ref|NP_733951.1| helicase [Strawberry mottle virus]
          Length = 499

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/66 (53%), Positives = 44/66 (66%)
 Frame = +1

Query: 1   DESELIRIVTNSIVTVPMAIAEEKGRTFRSKFIFACTNRFCESEDAPLADVMAFRRRRHL 180
           DE ELI +V+ S   +  A  E+KG +F SK+IF C+NR   S +A LAD  AFRRRRHL
Sbjct: 121 DELELIPLVSCSHFPLVGAAIEDKGLSFNSKYIFMCSNRADVSSNAGLADNDAFRRRRHL 180

Query: 181 YVHVSR 198
            V V+R
Sbjct: 181 CVEVTR 186


Top