BLASTX nr result

ID: Atractylodes22_contig00000006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000006
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518649.1| PREDICTED: transcription initiation factor T...   556   e-156
ref|XP_002264290.1| PREDICTED: transcription initiation factor T...   552   e-155
ref|XP_002320500.1| predicted protein [Populus trichocarpa] gi|2...   543   e-152
ref|XP_002528944.1| transcription initiation factor tfiid, putat...   535   e-150
ref|XP_004144526.1| PREDICTED: transcription initiation factor T...   530   e-148

>ref|XP_003518649.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
            [Glycine max]
          Length = 544

 Score =  556 bits (1433), Expect = e-156
 Identities = 293/425 (68%), Positives = 332/425 (78%), Gaps = 21/425 (4%)
 Frame = -3

Query: 1214 DVDFKDVIEAPLPKAPLDTSVFCHWLAIEGVQPAIPENAPVEVIAAPTETKKPEQKNDEL 1035
            DVD KDVIEA LPKAPLDT+V CHWLAIEGVQPAIPENAPVEVI+AP++ KK EQK+D L
Sbjct: 100  DVDLKDVIEASLPKAPLDTAVTCHWLAIEGVQPAIPENAPVEVISAPSDVKKHEQKDDNL 159

Query: 1034 PIDIRLPVKHVLSRELQLYFNKITELAVTMPDTALFKEALMSLATDSGLHPLVPYFTCFI 855
            P+DI+LPVKHVLSRELQLYF+K+ EL ++  D+ LFKEAL+SLATDSGLHPLVPYFTCFI
Sbjct: 160  PVDIKLPVKHVLSRELQLYFDKVAELTLSESDSVLFKEALVSLATDSGLHPLVPYFTCFI 219

Query: 854  EDEVSRGLNNFQLLFALMRLVWSLLQNPHIHIEPYLHQLMPPVVTCVVAKRLGNRIADNH 675
             DEVSRGLNNF LLFALMR+V SLLQNPHI IEPYLHQLMP VVTC+VAKRLG R+ADNH
Sbjct: 220  ADEVSRGLNNFPLLFALMRVVSSLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGTRLADNH 279

Query: 674  WELRDFTANLVATICKRFGHNYSSLQTRLTKTLLKSFLDRKRTLTQHYGAIQGLAALGPH 495
            WELRDFTA+LVA+ICKRFGH YS+LQ+RLTKTLL +FLD K+ LTQHYGAIQGL ALGP+
Sbjct: 280  WELRDFTAHLVASICKRFGHVYSNLQSRLTKTLLNAFLDPKKALTQHYGAIQGLGALGPN 339

Query: 494  VVRLFLLPNLETYLGFLE-EMLLENQKKEMTRHEAWRVYGALLRAAGRSVYDLLKLFPIL 318
            VVRL LLPNLETY+  LE EMLLE QK E+ RHEAWRVYGALLRAAG+ +YD LK+FP  
Sbjct: 340  VVRLLLLPNLETYMQLLEPEMLLEKQKNELKRHEAWRVYGALLRAAGQCIYDRLKIFPTF 399

Query: 317  PSPPANCVWRTNLKVIGTSETYKRKANAEELEGQPSPKKMMTDGPV-------------V 177
            PSPP + VW+TN KV+ TS TYKRKA+ ++LE QP  KK  TDG V              
Sbjct: 400  PSPPLHAVWKTNSKVL-TSSTYKRKASPDQLEQQPPLKKAATDGEVGVDLMNFSPVHKQE 458

Query: 176  SASNNNSIAQGETGGESEPAQM-----ADVGRRDKGGNRS--KTPAYLKQVLKDDLNSGQ 18
             A    S A    G  S  AQM      D   R K G+    KT A L QV KD+LNSG+
Sbjct: 459  EAGTQASSADSIIGTSSSSAQMKNETTLDGELRGKRGDTQALKTSAALTQVWKDELNSGR 518

Query: 17   VVMSL 3
             ++SL
Sbjct: 519  TLVSL 523


>ref|XP_002264290.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Vitis
            vinifera] gi|297739126|emb|CBI28777.3| unnamed protein
            product [Vitis vinifera]
          Length = 543

 Score =  552 bits (1423), Expect = e-155
 Identities = 292/426 (68%), Positives = 341/426 (80%), Gaps = 22/426 (5%)
 Frame = -3

Query: 1214 DVDFKDVIEAPLPKAPLDTSVFCHWLAIEGVQPAIPENAPVEVIAAPTETKKPEQKNDEL 1035
            D+DFKDVIEAPLPKAPLD +V CHWLAIEGVQPAIPENAPVEVIAAP++ KK EQK+D L
Sbjct: 100  DLDFKDVIEAPLPKAPLDAAVVCHWLAIEGVQPAIPENAPVEVIAAPSDGKKFEQKDDGL 159

Query: 1034 PIDIRLPVKHVLSRELQLYFNKITELAVTMPDTALFKEALMSLATDSGLHPLVPYFTCFI 855
            P+DI+LP+KHVLSRELQLYF+KI +L V   D+ALFKEAL+SLATDSGLHPLVPYFT FI
Sbjct: 160  PVDIKLPIKHVLSRELQLYFDKIIDLTVNRSDSALFKEALVSLATDSGLHPLVPYFTYFI 219

Query: 854  EDEVSRGLNNFQLLFALMRLVWSLLQNPHIHIEPYLHQLMPPVVTCVVAKRLGNRIADNH 675
             DEVSRGLN+F LLFALMR+VWSLLQNPHIHIEPYLHQLMP VVTC+VAKR+GNR+ADNH
Sbjct: 220  SDEVSRGLNDFNLLFALMRVVWSLLQNPHIHIEPYLHQLMPSVVTCLVAKRIGNRLADNH 279

Query: 674  WELRDFTANLVATICKRFGHNYSSLQTRLTKTLLKSFLDRKRTLTQHYGAIQGLAALGPH 495
            WELRDFTANLVA+ICKRFGH Y++LQTRLTKTLL +FLD KR++TQHYGAIQGLAALGP+
Sbjct: 280  WELRDFTANLVASICKRFGHVYNNLQTRLTKTLLHAFLDPKRSMTQHYGAIQGLAALGPN 339

Query: 494  VVRLFLLPNLETYLGFLE-EMLLENQKKEMTRHEAWRVYGALLRAAGRSVYDLLKLFPIL 318
            +VRL ++PNLE YL  LE EMLLE QK E+ RHEAW VYGALLRA G+S+YD LK+FP L
Sbjct: 340  MVRLLIVPNLEPYLRLLEPEMLLEKQKNELKRHEAWCVYGALLRATGQSIYDRLKMFPAL 399

Query: 317  PSPPANCVWRTNLKVIGTSETYKRKANAEELEGQPSPKKMMTDGP--VVSASNNNSIAQG 144
            PSPPA  V+RTN +V+ TS   KRKAN E LE QPS KK+ TDGP  VV  + ++++   
Sbjct: 400  PSPPAR-VFRTNGRVV-TSPPNKRKANNEHLEQQPSLKKIATDGPMDVVPTNLSSNMQPP 457

Query: 143  ETGGESEPAQMADVG------------------RRDKGGNRS-KTPAYLKQVLKDDLNSG 21
            ET G   P+   D+G                  R+ KG +R+ K  A L Q  +DDL SG
Sbjct: 458  ETKG-PVPSTDPDMGPSSSSRQIPHGNISDSRDRKGKGDSRALKMSAVLTQTWRDDLKSG 516

Query: 20   QVVMSL 3
             +++SL
Sbjct: 517  HLLVSL 522


>ref|XP_002320500.1| predicted protein [Populus trichocarpa] gi|222861273|gb|EEE98815.1|
            predicted protein [Populus trichocarpa]
          Length = 532

 Score =  543 bits (1398), Expect = e-152
 Identities = 287/415 (69%), Positives = 330/415 (79%), Gaps = 11/415 (2%)
 Frame = -3

Query: 1214 DVDFKDVIEAPLPKAPLDTSVFCHWLAIEGVQPAIPENAPVEVIAAPTETKKPEQKNDEL 1035
            D+DFKDVIEAPLPKAPLDT+V CHWLAIEGVQPAIPENAP+EVIA P++ K  EQ NDE 
Sbjct: 100  DIDFKDVIEAPLPKAPLDTAVVCHWLAIEGVQPAIPENAPLEVIAPPSDGKISEQ-NDEF 158

Query: 1034 PIDIRLPVKHVLSRELQLYFNKITELAVTMPDTALFKEALMSLATDSGLHPLVPYFTCFI 855
            P+DI+LPVKHVLSRELQLYF+KIT+L V   D+ LFKEAL+SLATDSGLHPL+PYFT FI
Sbjct: 159  PVDIKLPVKHVLSRELQLYFDKITDLTVRRSDSVLFKEALVSLATDSGLHPLIPYFTYFI 218

Query: 854  EDEVSRGLNNFQLLFALMRLVWSLLQNPHIHIEPYLHQLMPPVVTCVVAKRLGNRIADNH 675
             DEV+RGLN++ LLFALMR+VWSLLQNPHIHIEPYLHQLMP VVTC+VA++LGNR ADNH
Sbjct: 219  ADEVARGLNDYSLLFALMRVVWSLLQNPHIHIEPYLHQLMPSVVTCLVARKLGNRFADNH 278

Query: 674  WELRDFTANLVATICKRFGHNYSSLQTRLTKTLLKSFLDRKRTLTQHYGAIQGLAALGPH 495
            WELRDFTANLVA+ICKRFGH Y+SLQTRLTKTLL + LD KR+LTQHYGAIQGLAALGP+
Sbjct: 279  WELRDFTANLVASICKRFGHVYNSLQTRLTKTLLNALLDPKRSLTQHYGAIQGLAALGPN 338

Query: 494  VVRLFLLPNLETYLGFLE-EMLLENQKKEMTRHEAWRVYGALLRAAGRSVYDLLKLFPIL 318
            VVRL LLPNL+ YL  LE EMLLE QK EM RHEAW VYGALL AAG+S+YD LK+FP L
Sbjct: 339  VVRLLLLPNLKPYLQLLEPEMLLEKQKNEMKRHEAWHVYGALLCAAGQSIYDRLKMFPAL 398

Query: 317  PSPPANCVWRTNLKVIGTSETYKRKANAEELEGQPSPKKMMTDGPV-------VSASNNN 159
             S PA  V RTN KV+ T    KRKA+ E +E QP PKK+ TDGPV             +
Sbjct: 399  MSHPACAVLRTNEKVV-TKRPDKRKASMEHME-QPPPKKIATDGPVDMQVEPIAPVPLGD 456

Query: 158  SIAQGETGGESEP--AQMADVGRRDKGGNRS-KTPAYLKQVLKDDLNSGQVVMSL 3
            S     T  E  P  ++     ++DKG +++ KT A L QV KDDLNSG +++SL
Sbjct: 457  SKTGLSTSSEHTPNYSEAGSRNQKDKGDSQAIKTSAILSQVWKDDLNSGHLLVSL 511


>ref|XP_002528944.1| transcription initiation factor tfiid, putative [Ricinus communis]
            gi|223531590|gb|EEF33418.1| transcription initiation
            factor tfiid, putative [Ricinus communis]
          Length = 542

 Score =  535 bits (1379), Expect = e-150
 Identities = 285/425 (67%), Positives = 324/425 (76%), Gaps = 21/425 (4%)
 Frame = -3

Query: 1214 DVDFKDVIEAPLPKAPLDTSVFCHWLAIEGVQPAIPENAPVEVIAAPTETKKPEQKNDEL 1035
            D+DFKDVIEAPLPKAPLDTS+ CHWLAIEGVQPAIPENAP+EVIA P + K  E K D L
Sbjct: 100  DIDFKDVIEAPLPKAPLDTSIVCHWLAIEGVQPAIPENAPLEVIAPPPDGKNNELK-DGL 158

Query: 1034 PIDIRLPVKHVLSRELQLYFNKITELAVTMPDTALFKEALMSLATDSGLHPLVPYFTCFI 855
            P+DI+LPV+HVLSRELQLYF+KITEL +   D  LFKEAL+SLATD GLHPLVPYFTCFI
Sbjct: 159  PVDIKLPVRHVLSRELQLYFDKITELTMRRSDLPLFKEALVSLATDPGLHPLVPYFTCFI 218

Query: 854  EDEVSRGLNNFQLLFALMRLVWSLLQNPHIHIEPYLHQLMPPVVTCVVAKRLGNRIADNH 675
             DEVSR L++FQLLFALMR+V SLLQNPHIHIEPYLHQLMP VVTC+VAKRLGNR ADNH
Sbjct: 219  ADEVSRSLSDFQLLFALMRVVRSLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRFADNH 278

Query: 674  WELRDFTANLVATICKRFGHNYSSLQTRLTKTLLKSFLDRKRTLTQHYGAIQGLAALGPH 495
            WELRDFTANLVA+ICKRFGH YSSLQTRLTKTLL +  D KR+LTQHYGAIQGLAALGP+
Sbjct: 279  WELRDFTANLVASICKRFGHVYSSLQTRLTKTLLNALFDPKRSLTQHYGAIQGLAALGPN 338

Query: 494  VVRLFLLPNLETYLGFLE-EMLLENQKKEMTRHEAWRVYGALLRAAGRSVYDLLKLFPIL 318
            VVR  +LPNL+ YL  LE EMLLE QK EM RHEAW VYGALL AAG+ +YD LKLFP+ 
Sbjct: 339  VVRFLVLPNLKPYLQVLEPEMLLEKQKNEMKRHEAWLVYGALLNAAGQCLYDRLKLFPLF 398

Query: 317  PSPPANCVWRTNLKVIGTSETYKRKANAEELEGQPSPKKMMTDGPVVSASNNNS------ 156
            PSPPA+ VWRTN K+I T++  KRKA+ +  E QP PK++ TD PV + S ++S      
Sbjct: 399  PSPPAHAVWRTNGKII-TAQLNKRKASMQPAE-QPLPKRIATDDPVNALSTDSSPSRMQW 456

Query: 155  -----------IAQGETGGESEPAQMADVGRRDK---GGNRSKTPAYLKQVLKDDLNSGQ 18
                        A   T  E  P       + ++    G   KT A L QV KDDL SGQ
Sbjct: 457  EATTPVPSSDTNASASTSSEQMPTNHESDCKTERVKGDGGVMKTSAILNQVWKDDLKSGQ 516

Query: 17   VVMSL 3
            ++ SL
Sbjct: 517  LLASL 521


>ref|XP_004144526.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
            [Cucumis sativus]
          Length = 544

 Score =  530 bits (1364), Expect = e-148
 Identities = 272/425 (64%), Positives = 329/425 (77%), Gaps = 21/425 (4%)
 Frame = -3

Query: 1214 DVDFKDVIEAPLPKAPLDTSVFCHWLAIEGVQPAIPENAPVEVIAAPTETKKPEQKNDEL 1035
            D++FKDVI+APLPKAPLD +VFCHWLAIEGVQPAIPENAPVEVI  P++TK  EQK DE+
Sbjct: 100  DLEFKDVIDAPLPKAPLDAAVFCHWLAIEGVQPAIPENAPVEVILPPSDTKSSEQK-DEV 158

Query: 1034 PIDIRLPVKHVLSRELQLYFNKITELAVTMPDTALFKEALMSLATDSGLHPLVPYFTCFI 855
            P+DI+LPVKH+LS+ELQLYF+KITEL V+   T LFK+AL+SLATDSGLHPLVPYFTC+I
Sbjct: 159  PVDIKLPVKHILSKELQLYFDKITELVVSRSSTDLFKKALVSLATDSGLHPLVPYFTCYI 218

Query: 854  EDEVSRGLNNFQLLFALMRLVWSLLQNPHIHIEPYLHQLMPPVVTCVVAKRLGNRIADNH 675
             DEV+RGL ++ LLFALMR+VWSLLQNPHIHIEPYLHQ+MP VVTC+VAKRLG+R +DNH
Sbjct: 219  ADEVARGLGDYSLLFALMRVVWSLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGSRFSDNH 278

Query: 674  WELRDFTANLVATICKRFGHNYSSLQTRLTKTLLKSFLDRKRTLTQHYGAIQGLAALGPH 495
            WELRDFTA +VA ICKRFGH Y++LQT+LTKTLL +FLD KR+LTQHYGAI+GLAALG +
Sbjct: 279  WELRDFTAKVVALICKRFGHVYNTLQTKLTKTLLNAFLDPKRSLTQHYGAIRGLAALGMN 338

Query: 494  VVRLFLLPNLETYLGFLE-EMLLENQKKEMTRHEAWRVYGALLRAAGRSVYDLLKLFPIL 318
            VV L +LPNLE YLG LE EMLL NQK EM RHEAW VYGALLRA G+ +Y+ +K+FP L
Sbjct: 339  VVHLLILPNLEPYLGLLEPEMLLANQKNEMKRHEAWHVYGALLRAVGQCIYERIKIFPPL 398

Query: 317  PSPPANCVWRTNLKVIGTSETYKRKANAEELEGQPSPKKMMTDGP--------------- 183
             S PA  V RTN + I T+   KRKANA+ LEGQP  K+M  DGP               
Sbjct: 399  LSTPAGSVLRTNARTITTTFPNKRKANADYLEGQPPLKRMSIDGPMGVMLTNSSASHMEG 458

Query: 182  --VVSASNNNSIAQGETGG--ESEPAQMADVGRRDKGGNR-SKTPAYLKQVLKDDLNSGQ 18
              V +AS N+++    + G  ++E        R+ K  ++  K  A L QV K+DLNSG+
Sbjct: 459  TVVPAASGNSNLVSPTSSGQMQNEAISSGSTSRKGKHDDQILKKSAVLSQVWKEDLNSGK 518

Query: 17   VVMSL 3
            ++ S+
Sbjct: 519  LLTSM 523


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