BLASTX nr result

ID: Atractylodes22_contig00000001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00000001
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   177   8e-43
ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like i...   176   1e-42
ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like i...   176   1e-42
ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [...   176   2e-42
emb|CBI32622.3| unnamed protein product [Vitis vinifera]              173   2e-41

>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  177 bits (449), Expect = 8e-43
 Identities = 88/98 (89%), Positives = 94/98 (95%), Gaps = 1/98 (1%)
 Frame = -2

Query: 292 MAAAARPLVTVQALESDMATDGAS-LPLPAVMKAAIRPDIVNYVHSNISKNSRQPYAVSR 116
           MAAAARPLVTVQ L+SDMATDG + +PLP VMKA+IRPDIVN+VHSNISKNSRQPYAVSR
Sbjct: 1   MAAAARPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVNFVHSNISKNSRQPYAVSR 60

Query: 115 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN 2
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN 98


>ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 2 [Glycine max]
          Length = 371

 Score =  176 bits (447), Expect = 1e-42
 Identities = 87/98 (88%), Positives = 95/98 (96%), Gaps = 1/98 (1%)
 Frame = -2

Query: 292 MAAAARPLVTVQALESDMATDG-ASLPLPAVMKAAIRPDIVNYVHSNISKNSRQPYAVSR 116
           MAAAARPLVTVQAL+SDMATD  A++P+P VMK++IRPDIVN+VHSNISKNSRQPYAVSR
Sbjct: 1   MAAAARPLVTVQALDSDMATDASATVPIPDVMKSSIRPDIVNFVHSNISKNSRQPYAVSR 60

Query: 115 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN 2
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN 98


>ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 1 [Glycine max]
          Length = 405

 Score =  176 bits (447), Expect = 1e-42
 Identities = 87/98 (88%), Positives = 95/98 (96%), Gaps = 1/98 (1%)
 Frame = -2

Query: 292 MAAAARPLVTVQALESDMATDG-ASLPLPAVMKAAIRPDIVNYVHSNISKNSRQPYAVSR 116
           MAAAARPLVTVQAL+SDMATD  A++P+P VMK++IRPDIVN+VHSNISKNSRQPYAVSR
Sbjct: 1   MAAAARPLVTVQALDSDMATDASATVPIPDVMKSSIRPDIVNFVHSNISKNSRQPYAVSR 60

Query: 115 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN 2
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN 98


>ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
          Length = 405

 Score =  176 bits (446), Expect = 2e-42
 Identities = 87/98 (88%), Positives = 94/98 (95%), Gaps = 1/98 (1%)
 Frame = -2

Query: 292 MAAAARPLVTVQALESDMATDG-ASLPLPAVMKAAIRPDIVNYVHSNISKNSRQPYAVSR 116
           MAAAARPLVTVQAL+ DMATD  A++P+P VMKA+IRPDIVN+VHSNISKNSRQPYAVSR
Sbjct: 1   MAAAARPLVTVQALDGDMATDASATVPIPDVMKASIRPDIVNFVHSNISKNSRQPYAVSR 60

Query: 115 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN 2
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN 98


>emb|CBI32622.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  173 bits (438), Expect = 2e-41
 Identities = 86/97 (88%), Positives = 92/97 (94%), Gaps = 1/97 (1%)
 Frame = -2

Query: 289 AAAARPLVTVQALESDMATDGAS-LPLPAVMKAAIRPDIVNYVHSNISKNSRQPYAVSRK 113
           AAAARPLVTVQ L+SDMATDG + +PLP VMKA+IRPDIV +VHSNISKNSRQPYAVSR+
Sbjct: 3   AAAARPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVTFVHSNISKNSRQPYAVSRR 62

Query: 112 AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN 2
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGN 99


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