BLASTX nr result

ID: Atractylodes21_contig00054962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054962
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...    75   4e-12
dbj|BAB02140.1| unnamed protein product [Arabidopsis thaliana]         74   9e-12
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    72   6e-11
gb|AAG51467.1|AC069160_13 hypothetical protein, 5' partial [Arab...    67   2e-09
gb|AAG52110.1|AC023064_3 hypothetical protein; 60873-62443 [Arab...    67   2e-09

>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/77 (48%), Positives = 54/77 (70%)
 Frame = -3

Query: 232 QISINAMAGITDYQTMRVTGHYGRKSLQMLLDTGSTHNFIDAALARKLGCKLMSKSPMMV 53
           QIS+NA++GI+ Y+TM V G   ++ L +L+D+GSTHNFID+ +A KLGC + S     V
Sbjct: 354 QISVNAVSGISGYKTMGVKGTVDKRDLFILIDSGSTHNFIDSTVAAKLGCHVESAGLTKV 413

Query: 52  RVADEGQVSCDTMIEGF 2
            VAD  +++ D  I+GF
Sbjct: 414 AVADGRKLNVDGQIKGF 430


>dbj|BAB02140.1| unnamed protein product [Arabidopsis thaliana]
          Length = 904

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/77 (49%), Positives = 51/77 (66%)
 Frame = -3

Query: 232 QISINAMAGITDYQTMRVTGHYGRKSLQMLLDTGSTHNFIDAALARKLGCKLMSKSPMMV 53
           QI +NA++GI+DY TMRV G Y  K L +L+D+GST NFID+ +A+KLGCK+       V
Sbjct: 219 QIFVNAVSGISDYTTMRVKGMYDNKILFILIDSGSTFNFIDSTMAKKLGCKVEPTGLTRV 278

Query: 52  RVADEGQVSCDTMIEGF 2
            VAD  ++  D  I  F
Sbjct: 279 SVADGRKLRVDGKITDF 295


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
           thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/77 (45%), Positives = 51/77 (66%)
 Frame = -3

Query: 232 QISINAMAGITDYQTMRVTGHYGRKSLQMLLDTGSTHNFIDAALARKLGCKLMSKSPMMV 53
           QIS+NA++GI  Y+TMRV G Y +K + +L+D+GSTHNF+D   A KLGCK+ +     V
Sbjct: 375 QISVNAVSGIAGYKTMRVKGTYDKKIIFILIDSGSTHNFLDPNTAAKLGCKVDTAGLTRV 434

Query: 52  RVADEGQVSCDTMIEGF 2
            VAD  ++  +  +  F
Sbjct: 435 SVADGRKLRVEGKVTDF 451


>gb|AAG51467.1|AC069160_13 hypothetical protein, 5' partial [Arabidopsis thaliana]
          Length = 368

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/76 (43%), Positives = 50/76 (65%)
 Frame = -3

Query: 229 ISINAMAGITDYQTMRVTGHYGRKSLQMLLDTGSTHNFIDAALARKLGCKLMSKSPMMVR 50
           IS+NA++G++DY+TMRV G Y ++ L +L+D  STH+F+D+ +A KL C L   S   V 
Sbjct: 195 ISVNAISGVSDYRTMRVKGLYEKQVLSILIDPDSTHSFMDSKVAEKLKCVLKPASMAQVS 254

Query: 49  VADEGQVSCDTMIEGF 2
           VAD   +  +  I+ F
Sbjct: 255 VADGRLLGLNAKIDKF 270


>gb|AAG52110.1|AC023064_3 hypothetical protein; 60873-62443 [Arabidopsis thaliana]
          Length = 508

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/76 (43%), Positives = 50/76 (65%)
 Frame = -3

Query: 229 ISINAMAGITDYQTMRVTGHYGRKSLQMLLDTGSTHNFIDAALARKLGCKLMSKSPMMVR 50
           IS+NA++G++DY+TMRV G Y ++ L +L+D  STH+F+D+ +A KL C L   S   V 
Sbjct: 335 ISVNAISGVSDYRTMRVKGLYEKQVLSILIDPDSTHSFMDSKVAEKLKCVLKPASMAQVS 394

Query: 49  VADEGQVSCDTMIEGF 2
           VAD   +  +  I+ F
Sbjct: 395 VADGRLLGLNAKIDKF 410


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