BLASTX nr result

ID: Atractylodes21_contig00054926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054926
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF87376.2| unknown [Zea mays]                                     178   4e-43
ref|XP_002445564.1| hypothetical protein SORBIDRAFT_07g021665 [S...   176   2e-42
gb|ABA93844.2| retrotransposon protein, putative, unclassified [...   175   3e-42
emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]                174   7e-42
gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subc...   174   7e-42

>gb|ACF87376.2| unknown [Zea mays]
          Length = 526

 Score =  178 bits (452), Expect = 4e-43
 Identities = 83/127 (65%), Positives = 99/127 (77%)
 Frame = +3

Query: 3   PTEAHWNALKRIIRYLQGTSDYGLHLSPAPNLSLLAYTDADWAGCPDTRRSTSGYCVYLG 182
           P + H + LKRI+RY++GT DYGLH+  + +L LLAY+DADWAGCPDTRRSTSGYCV+LG
Sbjct: 334 PRDTHMSLLKRILRYVRGTLDYGLHIYRSSSLDLLAYSDADWAGCPDTRRSTSGYCVFLG 393

Query: 183 DNLLSWSSKRQPTVSRSSAEAEYRGVANVVAEICWXXXXXXXXXXXXSRATLVYCDNVSA 362
            NL++WSSKRQ TVSRSSAEAEYRGVAN VAEICW             RA +V+CDNVS 
Sbjct: 394 ANLVAWSSKRQHTVSRSSAEAEYRGVANAVAEICWLRQLLTELCHPPRRAAVVFCDNVST 453

Query: 363 IYLSGNP 383
           +YL+ NP
Sbjct: 454 MYLASNP 460


>ref|XP_002445564.1| hypothetical protein SORBIDRAFT_07g021665 [Sorghum bicolor]
           gi|241941914|gb|EES15059.1| hypothetical protein
           SORBIDRAFT_07g021665 [Sorghum bicolor]
          Length = 599

 Score =  176 bits (445), Expect = 2e-42
 Identities = 79/127 (62%), Positives = 98/127 (77%)
 Frame = +3

Query: 3   PTEAHWNALKRIIRYLQGTSDYGLHLSPAPNLSLLAYTDADWAGCPDTRRSTSGYCVYLG 182
           P+ AHW+ +KRI+RYL+G+   GL +S +P+  L AY+DADWAGCPDTRRSTSGYC++LG
Sbjct: 454 PSAAHWSLVKRILRYLRGSISDGLFISASPSNELQAYSDADWAGCPDTRRSTSGYCIFLG 513

Query: 183 DNLLSWSSKRQPTVSRSSAEAEYRGVANVVAEICWXXXXXXXXXXXXSRATLVYCDNVSA 362
           + L+SWSSKRQPTVSRSSAEAEYR VAN  AE CW             +AT++YCDN+SA
Sbjct: 514 NTLVSWSSKRQPTVSRSSAEAEYRAVANAAAECCWLRNLLQELHVHVGKATVIYCDNISA 573

Query: 363 IYLSGNP 383
           +YLS NP
Sbjct: 574 VYLSQNP 580


>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1099

 Score =  175 bits (444), Expect = 3e-42
 Identities = 82/127 (64%), Positives = 99/127 (77%)
 Frame = +3

Query: 3    PTEAHWNALKRIIRYLQGTSDYGLHLSPAPNLSLLAYTDADWAGCPDTRRSTSGYCVYLG 182
            P ++H   LKRI+RY++GT D GLH+  +P+  L+AY+DA+WAGCPDTR+STSGY V+LG
Sbjct: 914  PRDSHLATLKRILRYVRGTLDLGLHIRHSPSTDLVAYSDANWAGCPDTRKSTSGYAVFLG 973

Query: 183  DNLLSWSSKRQPTVSRSSAEAEYRGVANVVAEICWXXXXXXXXXXXXSRATLVYCDNVSA 362
            DNL+SWSSKRQ TVSRSSAEAEYR +AN VAE CW            S+ATLVYCDNVSA
Sbjct: 974  DNLVSWSSKRQHTVSRSSAEAEYRAMANAVAETCWLRQLLHELHTPPSKATLVYCDNVSA 1033

Query: 363  IYLSGNP 383
            +YLS NP
Sbjct: 1034 VYLSTNP 1040


>emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]
          Length = 811

 Score =  174 bits (441), Expect = 7e-42
 Identities = 84/127 (66%), Positives = 95/127 (74%)
 Frame = +3

Query: 3    PTEAHWNALKRIIRYLQGTSDYGLHLSPAPNLSLLAYTDADWAGCPDTRRSTSGYCVYLG 182
            P E H  ALKRI+RY++G+ D GLH+  +    L  Y+DADWAGCPDTRRSTSGY V+LG
Sbjct: 626  PREPHLAALKRILRYIRGSMDLGLHIQRSSACDLAVYSDADWAGCPDTRRSTSGYAVFLG 685

Query: 183  DNLLSWSSKRQPTVSRSSAEAEYRGVANVVAEICWXXXXXXXXXXXXSRATLVYCDNVSA 362
            DNL+SWSSKRQ TVSRSSAEAEYR VAN VAE+ W            SRATLVYCDNVSA
Sbjct: 686  DNLVSWSSKRQHTVSRSSAEAEYRAVANAVAEVTWLRQLLQELHSPPSRATLVYCDNVSA 745

Query: 363  IYLSGNP 383
            +YLS NP
Sbjct: 746  VYLSSNP 752


>gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 976

 Score =  174 bits (441), Expect = 7e-42
 Identities = 82/127 (64%), Positives = 98/127 (77%)
 Frame = +3

Query: 3    PTEAHWNALKRIIRYLQGTSDYGLHLSPAPNLSLLAYTDADWAGCPDTRRSTSGYCVYLG 182
            P E+H  ALKRI+RY++GT +YGLH+  + +  L+AY+DA+WAGCPDTR+ST GY V+LG
Sbjct: 781  PRESHLTALKRILRYIRGTLEYGLHIQRSSSFDLMAYSDANWAGCPDTRKSTFGYAVFLG 840

Query: 183  DNLLSWSSKRQPTVSRSSAEAEYRGVANVVAEICWXXXXXXXXXXXXSRATLVYCDNVSA 362
            DNL+SWSSKRQ TVSRSSAEAEYR VAN VAE  W            S+ATLVYCDNVSA
Sbjct: 841  DNLISWSSKRQNTVSRSSAEAEYRAVANAVAETSWLRQLLHELYAPPSKATLVYCDNVSA 900

Query: 363  IYLSGNP 383
            +YLS NP
Sbjct: 901  VYLSTNP 907


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